guix/gnu/packages
Ricardo Wurmus 769346eef7
gnu: Add louvain.
* gnu/packages/bioinformatics.scm (louvain): New variable.
2023-02-10 15:48:51 +01:00
..
aux-files
patches gnu: jami: Update to 20230206.0. 2023-02-07 10:23:25 -05:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: greetd: Use new-style inputs. 2023-02-09 11:27:41 +01:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: giac: Update to 1.9.0-37. 2023-01-27 09:33:28 +01:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm
apparmor.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm gnu: python-photutils: Update to 1.6.0. 2023-01-27 18:16:56 +01:00
attr.scm
audio.scm gnu: rtmidi: Use JACK 2. 2023-02-07 20:00:35 +01:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm gnu: Rename 'guile-3.0/fixed' to 'guile-3.0/pinned'. 2023-02-05 06:56:42 +01:00
avahi.scm
avr-xyz.scm
avr.scm
axoloti.scm
backup.scm gnu: libchop: Fix build and test. 2023-02-09 01:07:22 +01:00
barrier.scm
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm
bioconductor.scm gnu: Add r-adacgh2. 2023-02-07 10:30:00 +01:00
bioinformatics.scm gnu: Add louvain. 2023-02-10 15:48:51 +01:00
bison.scm
bittorrent.scm
boost.scm
bootloaders.scm
bootstrap.scm
bqn.scm
browser-extensions.scm
build-tools.scm
busybox.scm gnu: busybox: Update to 1.36.0. 2023-02-02 18:52:07 +02:00
c.scm gnu: c-intro-and-ref: Update to 0.0.0-1.47e5a23. 2023-01-31 14:21:48 +00:00
calcurse.scm
calendar.scm
ccache.scm
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: Add python-setuptools-lint. 2023-02-06 15:05:25 +08:00
chemistry.scm
chez.scm
chicken.scm
chromium.scm gnu: ungoogled-chromium: Update to 109.0.5414.119-1. 2023-01-26 17:14:48 +01:00
ci.scm gnu: guile: Update to 3.0.9. 2023-01-26 15:16:54 +01:00
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm gnu: cmake: Update to 3.25.1. 2023-01-31 23:28:29 +01:00
cobol.scm
code.scm gnu: universal-ctags: Update to 6.0.20230122.0. 2023-01-23 12:10:09 -05:00
commencement.scm gnu: Rename 'guile-3.0/fixed' to 'guile-3.0/pinned'. 2023-02-05 06:56:42 +01:00
compression.scm gnu: upx: Update to 4.0.1. 2023-01-28 10:40:33 +08:00
compton.scm
configuration-management.scm gnu: gopkg-in-errgo-fmt-errors: Rename to go-gopkg-in-errgo-fmt-errors. 2023-02-07 00:05:53 +01:00
conky.scm
connman.scm
containers.scm gnu: Add distrobox. 2023-02-04 00:14:05 +01:00
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: simdjson: Update to 3.1.0. 2023-02-01 08:41:46 +00:00
cppi.scm
cran.scm gnu: Add r-castor. 2023-01-27 19:12:07 +01:00
crates-graphics.scm
crates-gtk.scm
crates-io.scm gnu: Add rust-smallbitvec-2. 2023-02-09 17:37:12 +04:00
cross-base.scm
crypto.scm gnu: libxcrypt: Update to 4.4.33. 2023-01-22 01:00:17 +01:00
cryptsetup.scm
cups.scm
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
darwin.scm
databases.scm gnu: galera: Update to 26.4.13. 2023-01-22 01:00:17 +01:00
datamash.scm
datastructures.scm
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm gnu: seer-gdb: Update to 1.14. 2023-02-02 21:49:48 +01:00
dejagnu.scm
dezyne.scm gnu: dezyne: Update to 2.17.1. 2023-01-27 20:38:49 +01:00
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm gnu: diffoscope: Replace cdrtools with cdrkit-libre. 2023-01-25 09:46:37 +02:00
digest.scm
direct-connect.scm
disk.scm gnu: ndctl: Update to 75. 2023-01-22 01:01:00 +01:00
display-managers.scm
distributed.scm
django.scm
djvu.scm
dlang.scm
dns.scm gnu: bind: Update to 9.16.37 [security fixes]. 2023-01-22 01:00:00 +01:00
docbook.scm
docker.scm
documentation.scm gnu: doc++: Use HTTPS home page. 2023-01-22 01:01:00 +01:00
dunst.scm
dvtm.scm
easyrpg.scm
ebook.scm
ed.scm
education.scm gnu: fet: Update to 6.8.2. 2023-02-04 17:53:05 +01:00
efi.scm
electronics.scm
elf.scm gnu: Add libdwarf. 2023-01-23 14:19:11 +01:00
elixir.scm
elm.scm
emacs-xyz.scm gnu: emacs-inspector: Update to 0.19. 2023-02-07 23:02:00 +01:00
emacs.scm gnu: tree-sitter: Move to its own module. 2023-02-09 17:36:23 +04:00
embedded.scm
emulators.scm gnu: mame: Update to 0.251. 2023-02-03 23:44:45 +01:00
enchant.scm
engineering.scm gnu: tree-sitter: Move to its own module. 2023-02-09 17:36:23 +04:00
enlightenment.scm gnu: efl: Choose lua implementation based on system architecture. 2023-02-09 11:03:31 +02:00
entr.scm
erlang.scm gnu: Rename 'git-minimal/fixed' to 'git-minimal/pinned'. 2023-02-05 06:56:42 +01:00
esolangs.scm
fabric-management.scm
fcitx.scm
fcitx5.scm gnu: fcitx5-rime: Update to 5.0.15. 2023-01-28 09:49:21 +08:00
figlet.scm
file-systems.scm gnu: libeatmydata: Update to 131. 2023-01-22 01:01:00 +01:00
file.scm
finance.scm gnu: ledger: Install example referenced in docs. 2023-01-31 23:08:43 +01:00
firmware.scm gnu: sgabios: Don't build for a specific target. 2023-02-08 09:26:19 +02:00
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-lxgw-wenkai-tc: Update to 0.932. 2023-02-07 09:13:38 +01:00
fontutils.scm
forth.scm
fpga.scm gnu: yosys: Use external abc. 2023-02-08 17:11:00 +00:00
freedesktop.scm gnu: basu: Propagate libcap. 2023-02-09 15:19:50 +01:00
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm
games.scm gnu: naev: Update to 0.10.3. 2023-02-04 17:53:06 +01:00
gawk.scm
gcal.scm
gcc.scm gnu: Add gccgo-12. 2023-02-09 21:58:08 +02:00
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: python-cartopy: Update to 0.21.1. 2023-02-05 09:39:11 -03:00
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm
gnome-xyz.scm gnu: papirus-icon-theme: Reduce inode consumption. 2023-01-29 01:00:15 +01:00
gnome.scm gnu: Rename 'samba/fixed' to 'samba/pinned'. 2023-02-05 06:56:43 +01:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm
gnustep.scm
gnuzilla.scm gnu: icedove: Update to 102.7.0. 2023-01-29 22:09:42 +01:00
gobby.scm
golang.scm gnu: go-github-com-spf13-pflag: Fix building with newer go. 2023-02-09 21:58:18 +02:00
gperf.scm
gpodder.scm
gps.scm
graph.scm gnu: Remove python-louvain-0.7. 2023-01-27 14:08:56 -05:00
graphics.scm gnu: gpaint: Update to 0.3.4 2023-02-08 17:11:00 +00:00
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm gnu: Rename 'git-minimal/fixed' to 'git-minimal/pinned'. 2023-02-05 06:56:42 +01:00
guile-wm.scm
guile-xyz.scm gnu: Add guile-simple-iterators. 2023-02-05 06:56:42 +01:00
guile.scm gnu: Rename 'guile-3.0/fixed' to 'guile-3.0/pinned'. 2023-02-05 06:56:42 +01:00
gv.scm
gxmessage.scm
hardware.scm gnu: hwinfo: Update to 22.2. 2023-01-29 01:00:01 +01:00
haskell-apps.scm gnu: shellcheck: Update to 0.9.0. 2023-02-01 08:41:58 +00:00
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm
haskell.scm gnu: Rename 'git-minimal/fixed' to 'git-minimal/pinned'. 2023-02-05 06:56:42 +01:00
haxe.scm
heads.scm
hexedit.scm
high-availability.scm
hugs.scm
hunspell.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm
image-viewers.scm gnu: imv: Record absolute file name of 'imv' script. 2023-02-05 14:03:21 +01:00
image.scm gnu: libpng-apng: Remove obsolete trailing #t. 2023-01-29 01:00:02 +01:00
imagemagick.scm
inklingreader.scm
inkscape.scm gnu: inkscape: Fix qrcode rendering. 2023-01-27 18:16:55 +01:00
installers.scm
instrumentation.scm
ipfs.scm
irc.scm
irods.scm
iso-codes.scm
jami.scm gnu: jami: Remove unused native inputs. 2023-02-08 09:36:26 -05:00
java-bootstrap.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java-xml.scm
java.scm
javascript.scm
jemalloc.scm
jose.scm
jrnl.scm
julia-jll.scm gnu: Add julia-cfitsio-jll. 2023-02-08 09:26:21 +02:00
julia-xyz.scm gnu: julia-crayons: Update to 4.1.1. 2023-02-08 09:26:22 +02:00
julia.scm gnu: julia: Use SSL_CERT_FILE for SSL certificates. 2023-02-09 16:48:41 +02:00
jupyter.scm
kawa.scm
kde-frameworks.scm gnu: kio: Fix indentation. 2023-02-09 08:43:34 -05:00
kde-games.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm gnu: okular: Add wayland support. 2023-02-04 17:08:58 +04:00
kerberos.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm gnu: Add motif. 2023-02-10 14:01:03 +08:00
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: linux-libre 4.14: Update to 4.14.305. 2023-02-08 23:43:47 +01:00
lirc.scm
lisp-check.scm
lisp-xyz.scm gnu: cl-nfiles: Update to 1.1.0. 2023-02-09 19:24:23 +01:00
lisp.scm gnu: janet: Update to 1.26.0. 2023-02-07 09:13:19 +01:00
llvm.scm
logging.scm
logo.scm
loko.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm gnu: lxqt-admin: Fix path for timezone file. 2023-02-08 09:42:58 +08:00
m4.scm
machine-learning.scm gnu: python-hmmlearn: Update to 0.2.8. 2023-02-10 15:48:51 +01:00
magic-wormhole.scm
mail.scm gnu: mpop: Update to 1.4.18. 2023-02-05 14:03:20 +01:00
make-bootstrap.scm gnu: guile-static: Use 'gcc-ar' and 'gcc-ranlib'. 2023-01-26 23:22:34 +01:00
man.scm
markup.scm
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: wxmaxima: Update to 22.12.0. 2023-02-08 17:09:07 +01:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm
mes.scm
messaging.scm gnu: prosody: Update to 0.12.2. 2023-02-03 15:30:02 +01:00
microcom.scm
minetest.scm
mingw.scm
moe.scm
monitoring.scm
moreutils.scm gnu: moreutils: Fix missing library. 2023-01-28 10:25:50 +08:00
motti.scm
mp3.scm
mpd.scm gnu: mpd: Update to 0.23.12. 2023-02-05 18:25:10 +01:00
mpi.scm gnu: hwloc: Update to 2.9.0. 2023-01-27 18:16:55 +01:00
mtools.scm
multiprecision.scm
music.scm gnu: milkytracker: Use JACK 2. 2023-02-07 19:58:48 +01:00
musl.scm
myrddin.scm
nano.scm
ncdu.scm gnu: ncdu: Update to 2.2.2. 2023-02-09 21:58:18 +02:00
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: Add perl-net-bonjour. 2023-02-09 21:27:06 +01:00
nfs.scm
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
notcurses.scm
noweb.scm
nss.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm gnu: Rename 'git-minimal/fixed' to 'git-minimal/pinned'. 2023-02-05 06:56:42 +01:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm gnu: hwloc: Update to 2.9.0. 2023-01-27 18:16:55 +01:00
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm gnu: rpm: Enable zstd support. 2023-02-09 08:47:21 -05:00
pantheon.scm
parallel.scm
pascal.scm
password-utils.scm
patchutils.scm
patool.scm
pciutils.scm
pcre.scm
pdf.scm gnu: mupdf: Update to 1.21.1. 2023-02-01 22:16:48 +01:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-maths.scm
perl-web.scm
perl.scm gnu: Add perl-growl-gntp. 2023-02-09 21:27:06 +01:00
perl6.scm
phabricator.scm
photo.scm
php.scm
piet.scm
pikchr.scm
pkg-config.scm
plan9.scm
plotutils.scm gnu: asymptote: Update to 2.84. 2023-01-27 09:45:13 +01:00
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
pypy.scm
python-build.scm
python-check.scm gnu: Add python-nox. 2023-01-31 23:12:40 +01:00
python-compression.scm
python-crypto.scm
python-science.scm
python-web.scm gnu: hypercorn: Update to 0.14.3. 2023-02-05 09:38:58 -03:00
python-xyz.scm gnu: python-wand: Update to 0.6.11. 2023-02-05 09:39:11 -03:00
python.scm
qt.scm gnu: qtdeclarative: Disable tst_qquickfolderdialogimpl test. 2023-02-08 20:34:04 -05:00
racket.scm
radio.scm gnu: sdrangel: Update to 7.8.6. 2023-02-09 19:24:23 +01:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rocm.scm
rpc.scm
rpm.scm
rrdtool.scm
rsync.scm
ruby.scm
rush.scm
rust-apps.scm
rust.scm
sagemath.scm
samba.scm gnu: Rename 'samba/fixed' to 'samba/pinned'. 2023-02-05 06:56:43 +01:00
sawfish.scm gnu: sawfish: Update to 1.13.0. 2023-01-28 14:36:49 +08:00
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm
search.scm gnu: ugrep: Update to 3.9.6. 2023-01-30 10:30:31 +08:00
security-token.scm
selinux.scm
sequoia.scm
serialization.scm
serveez.scm
shells.scm
shellutils.scm
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
solidity.scm
speech.scm
sphinx.scm
spice.scm
spreadsheet.scm
sqlite.scm
squirrel.scm
ssh.scm gnu: openssh: Update to 9.2p1 [security fixes]. 2023-02-04 12:12:52 +01:00
sssd.scm
stalonetray.scm
statistics.scm
stb.scm
stenography.scm
storage.scm
suckless.scm
sugar.scm
swig.scm
sync.scm gnu: megacmd: Update to 1.5.1 and add libuv dependency. 2023-02-04 00:06:29 +01:00
syncthing.scm
syndication.scm
synergy.scm
task-management.scm gnu: Add timewarrior. 2023-01-28 11:01:00 +01:00
task-runners.scm
tbb.scm
tcl.scm
telegram.scm
telephony.scm
terminals.scm
terraform.scm
tex.scm
texinfo.scm gnu: texinfo: Make 'perl-archive-zip' available to 'texi2any'. 2023-01-30 22:24:27 +01:00
text-editors.scm gnu: Add xnedit. 2023-02-10 14:09:15 +08:00
textutils.scm
time.scm
tls.scm gnu: guile-gnutls: Use gnutls-latest consistently. 2023-01-22 01:00:00 +01:00
tmux.scm
toolkits.scm
tor.scm gnu: tractor: Update to 4.1.1. 2023-01-28 14:06:52 +08:00
toys.scm
tree-sitter.scm gnu: Add tree-sitter-grammar-html. 2023-02-09 17:37:14 +04:00
tryton.scm
tv.scm
uglifyjs.scm
uml.scm
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm gnu: Remove valgrind-3.20. 2023-02-09 01:07:22 +01:00
version-control.scm gnu: Rename 'git-minimal/fixed' to 'git-minimal/pinned'. 2023-02-05 06:56:42 +01:00
video.scm gnu: obs-wlrobs: Update to 1.1. 2023-02-04 17:08:59 +04:00
vim.scm gnu: tree-sitter: Move to its own module. 2023-02-09 17:36:23 +04:00
virtualization.scm
vlang.scm
vnc.scm
vpn.scm
vulkan.scm gnu: spirv-cross: Activate tests. 2023-01-31 23:54:52 +01:00
w3m.scm gnu: w3m: Update to 0.5.3+git20230121. 2023-01-31 14:06:46 +08:00
wdiff.scm
weather.scm
web-browsers.scm gnu: lagrange: Update to 1.15.1. 2023-02-04 17:53:05 +01:00
web.scm gnu: guix-data-service: Update to 0.0.1-37.3ba8418. 2023-02-08 17:11:00 +00:00
webkit.scm gnu: Unify webkitgtk and webkitgtk-next. 2023-01-29 08:20:36 +01:00
wget.scm
wine.scm gnu: wine-minimal: Build more reproducibly. 2023-02-05 06:56:43 +01:00
wireservice.scm
wm.scm gnu: icewm: Enable icewm-menu-fdo. 2023-02-10 13:39:02 +08:00
wordnet.scm
wv.scm
wxwidgets.scm gnu: Add perl-alien-wxwidgets. 2023-02-09 21:27:06 +01:00
xdisorg.scm gnu: libwacom: Update to 2.6.0. 2023-02-01 08:39:42 +00:00
xfce.scm gnu: xfce: Add more packages. 2023-02-06 14:43:27 +08:00
xfig.scm
xiph.scm
xml.scm
xnee.scm
xorg.scm gnu: libxaw3d: Update to 1.6.4. 2023-01-31 12:08:36 +02:00
zig-xyz.scm gnu: zig: Update to 0.10.1. 2023-02-09 21:58:17 +02:00
zig.scm gnu: zig: Update to 0.10.1. 2023-02-09 21:58:17 +02:00
zile.scm
zwave.scm