152 lines
6.5 KiB
Scheme
152 lines
6.5 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2014, 2018 Eric Bavier <bavier@member.fsf.org>
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;;; Copyright © 2016-2020, 2022 Efraim Flashner <efraim@flashner.co.il>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages datamash)
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#:use-module (guix packages)
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#:use-module (guix licenses)
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#:use-module (guix download)
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#:use-module (guix git-download)
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#:use-module (guix build-system gnu)
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#:use-module (guix gexp)
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#:use-module (guix utils)
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#:use-module (gnu packages)
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#:use-module (gnu packages base)
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#:use-module (gnu packages gawk)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-xyz))
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(define-public datamash
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(package
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(name "datamash")
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(version "1.8")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "mirror://gnu/datamash/datamash-"
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version ".tar.gz"))
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(sha256
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(base32
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"1zgn55gvf60w2rs5f7vx7vdp50j89ki7mmjvm81xs5pngs67xnbs"))))
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(native-inputs
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(list which ;for tests
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perl)) ;for help2man
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(build-system gnu-build-system)
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(home-page "https://www.gnu.org/software/datamash/")
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(synopsis "Scriptable statistics and data calculation")
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(description
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"Perform basic numeric, textual and statistical operations on plain text
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files. Designed to work within standard pipelines without additional code.")
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(license gpl3+)))
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(define-public vnlog
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(package
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(name "vnlog")
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(version "1.32")
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(home-page "https://github.com/dkogan/vnlog")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url home-page)
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1g4insm6gkw3c82fq8q9swkdha3cncbz1nib15yg9b2s4yl123hm"))))
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(build-system gnu-build-system)
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(native-inputs
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(list python-numpy)) ;for tests
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(inputs
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(list mawk
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perl
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perl-ipc-run
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perl-list-moreutils
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perl-string-shellquote
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perl-text-diff
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perl-text-table
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python-wrapper))
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(arguments
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(list #:make-flags
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#~(list (string-append "CC=" #$(cc-for-target))
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(string-append "DESTDIR=" #$output)
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"USRLIB=lib"
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"MANDIR=share/man"
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(string-append "PY3_MODULE_PATH=lib/python"
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#$(version-major+minor
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(package-version
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(this-package-input "python-wrapper")))
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"/site-packages")
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;; Do not install the Python 2 modules.
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"DIST_PY2_MODULES=")
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'adjust-Makefile
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(lambda _
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(substitute* "GNUmakefile"
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;; Install Perl modules to the usual location.
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(("/usr/share/perl5")
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(string-append "/lib/perl5/site_perl/"
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#$(package-version
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(this-package-input "perl"))))
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;; Do not add a '/usr' suffix to DESTDIR.
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(("\\$\\(DESTDIR\\)/usr")
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"$(DESTDIR)")
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;; Do not strip RUNPATH from the installed C library.
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((".*find.*chrpath.*")
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""))))
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(add-after 'unpack 'use-absolute-mawk
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(lambda* (#:key inputs #:allow-other-keys)
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(let ((mawk (search-input-file inputs "bin/mawk")))
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(substitute* '("vnl-filter" "lib/Vnlog/Util.pm")
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(("'mawk'")
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(string-append "'" mawk "'"))))))
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(delete 'configure)
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(add-before 'check 'disable-python2-test
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(lambda _
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(delete-file "test/test_python2_parser.sh")
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(substitute* "GNUmakefile"
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((".*test/test_python2_parser\\.sh\\.RUN.*")
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""))))
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(add-after 'install 'wrap
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(let* ((out (assoc-ref outputs "out"))
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(PERL5LIB (string-append
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out "/lib/perl5/site_perl/"
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#$(package-version
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(this-package-input "perl"))
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":" (getenv "PERL5LIB"))))
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(for-each (lambda (script)
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(wrap-program script
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`("PERL5LIB" ":" prefix (,PERL5LIB))))
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(find-files (string-append out "/bin"))))))
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(add-after 'wrap 'check-wrapped-executables
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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;; Assert that the installed Perl scripts can find
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;; their dependencies even when PERL5LIB is unset.
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(unsetenv "PERL5LIB")
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(for-each (lambda (script)
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(invoke/quiet script "--help"))
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(find-files (string-append out "/bin")
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"^vnl-[[:lower:]]+$"))))))))
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(synopsis "Process labelled tabular ASCII data on the command line")
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(description
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"Vnlog (pronounced @dfn{vanillog}) is a toolkit for manipulating
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tabular ASCII data with labelled fields using regular command-line tools.")
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(license lgpl2.1+)))
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