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Author SHA1 Message Date
Leo Famulari 5af110868c
gnu: VLC: Update to 3.0.10. 
* gnu/packages/patches/vlc-fix-test_libvlc_slaves.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/video.scm (vlc): Update to 3.0.10.
[source]: Remove obsolete patch.
[arguments]: Remove obsolete workarounds for libssh and fribidi
compatibility issues in 'patch-source' phase.
 2020-04-30 21:31:15 -04:00
Leo Famulari 65fd3f0ac3
gnu: libmicrodns: Update to 0.1.2 [security fixes]. 
This fixes CVE-2020-6071, CVE-2020-6072, CVE-2020-6073, CVE-2020-6077,
CVE-2020-6078, and CVE-2020-6079.

* gnu/packages/dns.scm (libmicrodns): Update to 0.1.2.
[source]: Build from a tarball.
[build-system]: Use the meson-build-system.
[native-inputs]: Remove field.
 2020-04-30 21:31:11 -04:00
Brice Waegeneire 02ee43e486
gnu: Add usbguard. 
* gnu/packages/hardware.scm (usbguard): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-01 01:21:04 +02:00
Brice Waegeneire 22df0a1f59
gnu: Add libqb. 
* gnu/packages/hardware.scm (libqb): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-01 01:21:04 +02:00
Brice Waegeneire 135c1e0e43
gnu: umockdev: Fix test. 
* gnu/packages/check.scm (umockdev)[inputs]: Remove
'gobject-introspection'.
[arguments]: Replace phase 'skip-broken-test' by 'fix-test'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-01 01:21:04 +02:00
Jean-Baptiste Note 524e5fe56b
gnu: Add apt-mirror. 
* gnu/packages/debian.scm (apt-mirror): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-01 01:21:03 +02:00
Rene Saavedra 7ff2159b10
gnu: balsa: Update to 2.6.0. 
* gnu/packages/mail.scm (balsa): Update to 2.6.0.
[inputs]: Replace gmime-2.6 with gmime; add libical and libsecret.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-05-01 01:21:03 +02:00
Ludovic Courtès 69de98391d
profiles: Mark manual database as non-substitutable. 
Fixes <https://bugs.gnu.org/40381>.
Reported by pkill9 <pkill9@runbox.com>.

* guix/profiles.scm (manual-database): Pass #:substitutable? #f.
 2020-05-01 01:21:03 +02:00
Marius Bakke 229f4fa952
gnu: emacs-toml-mode: Fix syntax error in description. 
* gnu/packages/emacs-xyz.scm (emacs-toml-mode)[description]: Replace usage of
@acronym with @dfn to work around a Guile Texinfo limitation.
 2020-04-30 23:31:53 +02:00
Leo Famulari 6c7a39c45e
doc: Bootloader Configuration: Fix an obsolete example. 
Reported by rawmat on #guix.

* doc/guix.texi (Bootloader Configuration): Replace 'grub-configuration' with
'bootloader-configuration'.
 2020-04-30 17:22:01 -04:00
Vagrant Cascadian ac4fefb298
gnu: diffoscope: Update to 143. 
* gnu/packages/diffoscope (diffoscope): Update to 143.
  [native-inputs]: Add openssl and python-h5py.
  [arguments] Add openssl to add-known-tools phase.
  [arguments] Remove hdf5 from add-known-tools phase, added upstream.
 2020-04-30 13:13:07 -07:00
Leo Famulari 2a94f72ade
gnu: MPD: Update to 0.21.23. 
* gnu/packages/mpd.scm (mpd): Update to 0.21.23.
 2020-04-30 14:17:49 -04:00
Simon Josefsson 194cb75d85
gnu: libntlm: Update to 1.6 [fixes CVE-2019-17455]. 
* gnu/packages/gsasl.scm (libntlm): Update to 1.6.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-04-30 12:50:06 -04:00
Pierre Neidhardt 192177b049
gnu: sbcl-osicat: Fix library path. 
* gnu/packages/lisp-xyz.scm (sbcl-osicat)[arguments]: Replace 'cleanup phase
  to preserve the location of libosicat.so so that it can be found when
  loading the system.
 2020-04-30 16:57:40 +02:00
Ricardo Wurmus 24599740e7
gnu: r-vgam: Update to 1.1-3. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-3.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
 2020-04-30 15:37:22 +02:00
Ricardo Wurmus 0ffd9701f5
gnu: r-rcpparmadillo: Update to 0.9.870.2.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.870.2.0.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 599f2b50de
gnu: r-spatial: Update to 7.3-12. 
* gnu/packages/statistics.scm (r-spatial): Update to 7.3-12.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus aad9233c1d
gnu: r-nnet: Update to 7.3-14. 
* gnu/packages/statistics.scm (r-nnet): Update to 7.3-14.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 9c313889f1
gnu: r-kernsmooth: Update to 2.23-17. 
* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-17.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 1cf9a5cd75
gnu: r-foreign: Update to 0.8-79. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-79.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 175ec5eff4
gnu: r-class: Update to 7.3-17. 
* gnu/packages/statistics.scm (r-class): Update to 7.3-17.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus b2c95239e0
gnu: r-mass: Update to 7.3-51.6. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.6.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 1b6434a324
gnu: r-boot: Update to 1.3-25. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-25.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus c54b41093d
gnu: r-kutils: Update to 1.70. 
* gnu/packages/cran.scm (r-kutils): Update to 1.70.
[propagated-inputs]: Remove r-lavaan.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 2a749c8596
gnu: r-univoutl: Update to 0.2. 
* gnu/packages/cran.scm (r-univoutl): Update to 0.2.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus d7a29bd586
gnu: r-graphlayouts: Update to 0.7.0. 
* gnu/packages/cran.scm (r-graphlayouts): Update to 0.7.0.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus aa180e9e03
gnu: r-systemfonts: Update to 0.2.1. 
* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.1.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 8dfa9ab05a
gnu: r-ggfortify: Update to 0.4.10. 
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.10.
 2020-04-30 15:37:21 +02:00
Ricardo Wurmus 7d1e02c872
gnu: r-dalex: Update to 1.2.1. 
* gnu/packages/cran.scm (r-dalex): Update to 1.2.1.
 2020-04-30 15:37:20 +02:00
Ricardo Wurmus 1514fa85e4
gnu: r-arm: Update to 1.11-1. 
* gnu/packages/cran.scm (r-arm): Update to 1.11-1.
 2020-04-30 15:37:20 +02:00
Ricardo Wurmus b5ea7affcf
gnu: r-usethis: Update to 1.6.1. 
* gnu/packages/cran.scm (r-usethis): Update to 1.6.1.
 2020-04-30 15:37:20 +02:00
Ricardo Wurmus 78b686824d
gnu: r-rootsolve: Update to 1.8.2.1. 
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.1.
 2020-04-30 15:37:20 +02:00
Ricardo Wurmus 0ec790f82d
gnu: r-proxy: Update to 0.4-24. 
* gnu/packages/cran.scm (r-proxy): Update to 0.4-24.
 2020-04-30 15:37:20 +02:00
Ricardo Wurmus 0590673090
gnu: r-pkgbuild: Update to 1.0.7. 
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.7.
 2020-04-30 15:37:20 +02:00
Roel Janssen eca648b65b
gnu: Add miniasm. 
* gnu/packages/bioinformatics.scm (miniasm): New variable.
 2020-04-30 15:30:16 +02:00
Ricardo Wurmus e174231863
gnu: Add one more missing module import. 
This is a follow-up to commit 61fc72d3ac.

* gnu/packages/backup.scm: Add missing import of (gnu packages protobuf).
 2020-04-30 14:44:45 +02:00
Ricardo Wurmus 4ac3996036
gnu: Add missing module import. 
This is a follow-up to commit 61fc72d3ac.

* gnu/packages/backup.scm: Add missing import of (guix build-system cmake).
 2020-04-30 14:41:53 +02:00
Nicolas Goaziou 61fc72d3ac
gnu: Add zbackup. 
* gnu/packages/backup.scm (zbackup): New variable.
 2020-04-30 14:04:05 +02:00
Ricardo Wurmus cf1ae79375
gnu: python2-pysnptools: Update to 0.4.11. 
* gnu/packages/python-xyz.scm (python2-pysnptools): Update to 0.4.11;
implement in terms of...
(python-pysnptools): ...this new variable.
[propagated-inputs]: Add python-dill, python-h5py, and python-psutil.
 2020-04-30 13:08:33 +02:00
Ricardo Wurmus 46d07f8472
gnu: kaldi-gstreamer-server: Fix bug. 
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[arguments]: Patch
master_server.py before build.
 2020-04-30 13:08:33 +02:00
Ricardo Wurmus cb44af24c8
gnu: kaldi-gstreamer-server: Use Tornado 6. 
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[inputs]: Replace
python-tornado with python-tornado-6.
 2020-04-30 13:08:33 +02:00
Ricardo Wurmus 7395047017
gnu: Add python-tornado-6. 
* gnu/packages/python-web.scm (python-tornado-6): New variable.
 2020-04-30 13:08:33 +02:00
Ricardo Wurmus 4a148c6da3
gnu: python2-warpedlmm: Fix build. 
* gnu/packages/bioinformatics.scm (python2-warpedlmm)[propagated-inputs]: Add
python2-weave.
[arguments]: Disable tests and add "use-weave" phase.
 2020-04-30 13:08:33 +02:00
Ricardo Wurmus ed33317893
gnu: Add python2-weave. 
* gnu/packages/python-science.scm (python2-weave): New variable.
 2020-04-30 13:08:33 +02:00
Eric Brown 1b73fbdf5e
gnu: Add r-rserve. 
* gnu/packages/cran.scm (r-rserve): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2020-04-30 13:08:33 +02:00
Guillaume Le Vaillant f03e5ca59f
gnu: gnuradio: Fix runtime python environment for plugins. 
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add PYTHONPATH.
  [native-inputs]: Move python ...
  [inputs]: ... here.
 2020-04-30 10:09:15 +02:00
Mark H Weaver 89ea0415b3
gnu: linux-libre: Update to 5.4.36. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.36.
(linux-libre-5.4-pristine-source): Update hash.
 2020-04-29 22:13:56 -04:00
Mark H Weaver 09b87e503d
gnu: linux-libre@5.6: Update to 5.6.8. 
* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.8.
(linux-libre-5.6-pristine-source): Update hash.
 2020-04-29 22:13:15 -04:00
Mark H Weaver 5bc78570b2
gnu: linux-libre@4.19: Update to 4.19.119. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.119.
(linux-libre-4.19-pristine-source): Update hash.
 2020-04-29 22:12:10 -04:00
Ricardo Wurmus 851a3a779a
gnu: python-hacking: Update to 1.1.0. 
* gnu/packages/openstack.scm (python-hacking): Update to 1.1.0.
[arguments]: Add "delete-broken-test" phase.
[propagated-inputs]: Replace python-flake8-2.5 with python-flake8-2.6.
 2020-04-30 00:05:15 +02:00