Arvid Krein
|
a7d9cd742c
|
gnu: Add pcsc-cyberjack.
* gnu/packages/security-token.scm (pcsc-cyberjack): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
|
2023-06-02 19:24:21 +08:00 |
|
Peter Polidoro
|
7307b05abd
|
gnu: kicad: Update to 7.0.5.
* gnu/packages/engineering.scm (kicad): Update to 7.0.5.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
|
2023-06-02 13:13:23 +02:00 |
|
Ricardo Wurmus
|
41b6f213c1
|
gnu: r-tcgabiolinks: Update to 2.28.2.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.28.2.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
6d194c1ba8
|
gnu: r-biocthis: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.10.1.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
302b916b2b
|
gnu: r-basilisk-utils: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.12.1.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
6d54b5cc23
|
gnu: r-megadepth: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.10.0.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
0beada7cb0
|
gnu: r-s4arrays: Update to 1.0.4.
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.4.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
f06bd3e740
|
gnu: r-biocviews: Update to 1.68.1.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.1.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
438d2b80f7
|
gnu: r-rsubread: Update to 2.14.2.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.14.2.
|
2023-06-02 12:53:15 +02:00 |
|
|
Ricardo Wurmus
|
08e1e36942
|
gnu: r-treeio: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.1.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
93350d89a2
|
gnu: r-apeglm: Update to 1.22.1.
* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.22.1.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
e6faedd0c9
|
gnu: r-zellkonverter: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.10.1.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
071c31583b
|
gnu: r-scmap: Update to 1.22.3.
* gnu/packages/bioconductor.scm (r-scmap): Update to 1.22.3.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
2a35673351
|
gnu: r-limma: Update to 3.56.1.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.1.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
21342c3bcf
|
gnu: r-edger: Update to 3.42.4.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.4.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
15ffd4014e
|
gnu: r-biostrings: Update to 2.68.1.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.68.1.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
9e9e21dc46
|
gnu: r-biocparallel: Update to 1.34.2.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.2.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
6693480b46
|
gnu: r-densvis: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.2.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
3b20a9e600
|
gnu: r-delayedarray: Update to 0.26.3.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.3.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
f947aa3ac9
|
gnu: r-dearseq: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.12.1.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
ca0c012d4a
|
gnu: r-bambu: Update to 3.2.3.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.3.
|
2023-06-02 12:53:14 +02:00 |
|
|
Ricardo Wurmus
|
83bd8d51c3
|
gnu: r-alpine: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-alpine): Update to 1.26.0.
|
2023-06-02 12:53:13 +02:00 |
|
|
Ricardo Wurmus
|
f4639380ae
|
gnu: r-anvil: Update to 1.12.3.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.12.3.
|
2023-06-02 12:53:13 +02:00 |
|
|
Ricardo Wurmus
|
c2f0ce73a7
|
import/cran: string->license: Add another case for GPLv3+.
* guix/import/cran.scm (string->license): Translate "GPL (>=3)" to gpl3+.
|
2023-06-02 12:52:22 +02:00 |
|
|
Ricardo Wurmus
|
4f7efc8db9
|
gnu: r-biocviews: Sort inputs.
* gnu/packages/bioconductor.scm (r-biocviews)[propagated-inputs]: Sort them.
|
2023-06-02 12:51:15 +02:00 |
|
|
Ricardo Wurmus
|
52546a4512
|
gnu: r-biocparallel: Sort inputs.
* gnu/packages/bioconductor.scm (r-biocparallel)[propagated-inputs]: Sort
them.
|
2023-06-02 12:50:47 +02:00 |
|
|
Ricardo Wurmus
|
cbbb619ddb
|
import/cran: Libraries should not use CRAN-GUIX-NAME.
* guix/import/cran.scm (source-dir->dependencies): Do not use CRAN-GUIX-NAME
when processing result of NEEDED-LIBRARIES-IN-DIRECTORY.
|
2023-06-02 12:49:25 +02:00 |
|
|
Ricardo Wurmus
|
67183e25ad
|
import/cran: Also search Makevars file for libraries.
* guix/import/cran.scm (needed-libraries-in-directory): Look at Makevars in
addition to Makevars.in for libraries.
|
2023-06-02 12:48:42 +02:00 |
|
|
Ricardo Wurmus
|
bb27e3b8b1
|
gnu: r-dismo: Replace bundled jars.
Fixes <https://issues.guix.gnu.org/63783>.
* gnu/packages/cran.scm (r-dismo)[source]: Delete bundled jars.
[inputs]: Add java-maxent.
[native-inputs]: Add JDK and zip.
[arguments]: Add phases 'build-jars and 'strip-jar-timestamps.
|
2023-06-02 11:34:17 +02:00 |
|
|
Ricardo Wurmus
|
341b4b2a97
|
gnu: Add java-maxent.
* gnu/packages/bioinformatics.scm (java-maxent): New variable.
|
2023-06-02 11:34:17 +02:00 |
|
Andrew Tropin
|
75bdd4b052
|
gnu: swaylock-effects: Update to 1.6.11.
* gnu/packages/wm.scm (swaylock-effects): Update to 1.6.11.
|
2023-06-02 10:47:06 +04:00 |
|
|
Andrew Tropin
|
f9af75b2c3
|
gnu: xdg-desktop-portal-wlr: Update to 0.7.0.
* gnu/packages/freedesktop.scm (xdg-desktop-portal-wlr): Update to 0.7.0.
[inputs]: Add mesa.
|
2023-06-02 08:59:08 +04:00 |
|
|
Andrew Tropin
|
69c3aa561d
|
gnu: xdg-desktop-portal-gtk: Update to 1.14.1.
* gnu/packages/freedesktop.scm (xdg-desktop-portal-gtk): Update to 1.14.1.
|
2023-06-02 08:59:08 +04:00 |
|
|
Andrew Tropin
|
51c8e86350
|
gnu: xdg-desktop-portal: Update to 1.16.0.
* gnu/packages/freedesktop.scm (xdg-desktop-portal): Update to 1.16.0.
|
2023-06-02 08:59:08 +04:00 |
|
|
Andrew Tropin
|
a9c8e8fd38
|
gnu: libportal: Update to 0.6.
* gnu/packages/freedesktop.scm (libportal): Update to 0.6.
[arguments]: Remove deprecated backends option from #:configure-flags. Add
set-qt-environment-variables phase.
|
2023-06-02 08:59:07 +04:00 |
|
Katherine Cox-Buday
|
195c91b793
|
gnu: gopls: Update to 0.12.0.
* gnu/packages/golang.scm (gopls): Update to 0.12.0.
|
2023-06-01 23:00:44 -05:00 |
|
jgart
|
9dacecb111
|
gnu: Update waybar to 0.9.18.
* gnu/packages/wm.scm (waybar): Update to 0.9.18.
|
2023-06-01 22:59:38 -05:00 |
|
|
jgart
|
ab4347a1ad
|
gnu: python-fire: Update to 0.5.0.
* gnu/packages/python-xyz.scm (python-fire): Update to 0.5.0.
[inputs]: Remove python-six and python-termcolor.
[propagated-inputs]: Add python-six and python-termcolor.
|
2023-06-01 22:59:38 -05:00 |
|
|
Ricardo Wurmus
|
b4382b294e
|
gnu: Add python-colored.
* gnu/packages/python-xyz.scm (python-colored): New variable.
|
2023-06-01 20:48:17 +02:00 |
|
|
Ricardo Wurmus
|
eb2918aa96
|
gnu: Add python-plotext.
* gnu/packages/python-xyz.scm (python-plotext): New variable.
|
2023-06-01 20:48:17 +02:00 |
|
|
Ricardo Wurmus
|
d411b7d5e7
|
gnu: Add python-pyani.
* gnu/packages/bioinformatics.scm (python-pyani): New variable.
|
2023-06-01 20:48:17 +02:00 |
|
|
Ricardo Wurmus
|
525ef60ff4
|
gnu: Add python-illumina-utils.
* gnu/packages/bioinformatics.scm (python-illumina-utils): New variable.
|
2023-06-01 20:48:17 +02:00 |
|
Efraim Flashner
|
cf388642ce
|
gnu: libtommath: Honor the #:tests? flag.
* gnu/packages/multiprecision.scm (libtommath)[arguments]: Adjust custom
'check phase to honor the #:tests? flag.
|
2023-06-01 15:52:37 +03:00 |
|
|
Efraim Flashner
|
b428b49d8f
|
gnu: libtommath: Prevent possible integer overflow.
* gnu/packages/multiprecision.scm (libtommath)[source]: Add patch.
* gnu/packages/patches/libtommath-integer-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
|
2023-06-01 15:52:37 +03:00 |
|
|
Efraim Flashner
|
7c52ae295b
|
gnu: bear: Update to 3.1.2.
* gnu/packages/build-tools.scm (bear): Update to 3.1.2.
|
2023-06-01 15:24:23 +03:00 |
|
|
Ricardo Wurmus
|
ced6e0fe94
|
gnu: Add python-ete3.
* gnu/packages/bioinformatics.scm (python-ete3): New variable.
|
2023-06-01 14:10:04 +02:00 |
|
Andy Tai
|
e6705f994f
|
gnu: parallel: Update to 20230522.
* gnu/packages/parallel.scm (parallel): Update to 20230522.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
|
2023-06-01 12:55:09 +03:00 |
|
Greg Hogan
|
9511488941
|
gnu: zenity: Update to 3.44.1.
* gnu/packages/gnome.scm (zenity): Update to 3.44.1.
[native-inputs]: Add gtk+:bin.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
|
2023-06-01 12:44:58 +03:00 |
|
|
Greg Hogan
|
21388dce63
|
gnu: iperf: Update to 3.13.
* gnu/packages/networking.scm (iperf): Update to 3.13.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
|
2023-06-01 12:42:43 +03:00 |
|
|
Greg Hogan
|
3ab95b2753
|
gnu: iotop: Update to 1.23.
* gnu/packages/linux.scm (iotop): Update to 1.23.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
|
2023-06-01 12:41:37 +03:00 |
|