TakeV/guix
1
0
Fork 0
Code Issues Pull requests Packages Projects Releases Wiki Activity
76511 commits 102 branches 35 tags 561 MiB
Commit graph

68076 commits

Author SHA1 Message Date
Leo Famulari e60c7acf5a
gnu: linux-libre 4.14: Update to 4.14.229. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.229.
(linux-libre-4.14-pristine-source): Update hash.
 2021-04-08 15:12:05 -04:00
Leo Famulari eef44c8732
gnu: linux-libre 4.19: Update to 4.19.185. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.185.
(linux-libre-4.19-pristine-source): Update hash.
 2021-04-08 15:12:05 -04:00
Leo Famulari c44dd82a66
gnu: linux-libre 5.4: Update to 5.4.110. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.110.
(linux-libre-5.4-pristine-source): Update hash.
 2021-04-08 15:12:05 -04:00
Leo Famulari 1cdf95c14f
gnu: linux-libre 5.10: Update to 5.10.28. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.28.
(linux-libre-5.10-pristine-source): Update hash.
 2021-04-08 15:12:04 -04:00
Leo Famulari adb4c05aa6
gnu: linux-libre: Update to 5.11.12. 
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.12.
(linux-libre-5.11-pristine-source): Update hash.
 2021-04-08 15:12:04 -04:00
Maxim Cournoyer bdc96f6e0e
system: vm: Set a larger value for the msize option of the 9p file system. 
Fixes <https://issues.guix.gnu.org/47225>.

* gnu/system/vm.scm (%default-msize-value): New variable.
(%linux-vm-file-systems): Use it as the value of the msize option.
(mapping->file-system): Likewise.

Reported-by: Leo Famulari <leo@famulari.name>
 2021-04-08 15:12:01 -04:00
Mathieu Othacehe 2afc79b51d
ci: Introduce new subsets. 
Introduce 'images, 'system-tests and 'tarball subsets.

* gnu/ci.scm (cuirass-jobs): Break the 'all subset into smaller subsets.
 2021-04-08 15:24:03 +02:00
Mathieu Othacehe 14ada96451
ci: Remove the job period argument. 
Cuirass now deals with periodicity directly on specifications.

* gnu/ci.scm (derivation->job): Remove the period argument.
(image-jobs, system-test-jobs, tarball-jobs): Adapt them.
 2021-04-08 15:24:03 +02:00
Ricardo Wurmus 5f0c3535aa
gnu: r-genomicfeatures: Update to 1.42.3. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.42.3.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus e0147aa46f
gnu: r-gviz: Update to 1.34.1. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.34.1.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus 14a4c30828
gnu: r-universalmotif: Update to 1.8.4. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.4.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus 8a7933f37e
gnu: r-rsubread: Update to 2.4.3. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.3.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus 215b0ced02
gnu: r-chippeakanno: Update to 3.24.2. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.2.
[propagated-inputs]: Add r-dplyr.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus 55185f9b3f
gnu: r-diffbind: Update to 3.0.15. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.15.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus 9d2ca98213
gnu: r-genomeinfodb: Update to 1.26.6. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.6.
 2021-04-08 13:28:24 +02:00
Ricardo Wurmus fb73d7d10d
gnu: r-delayedarray: Update to 0.16.3. 
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.16.3.
 2021-04-08 13:28:23 +02:00
Paul Garlick 71ca8fd40b
gnu: Add texlive-mweights. 
* gnu/packages/tex.scm: New variable.
 2021-04-08 11:18:06 +01:00
Morgan Smith bb4f47a7f6
gnu: axoloti-runtime: Simplify build. 
* gnu/packages/axoloti.scm (axoloti-runtime)[arguments]: Remove
unnecessary environment variable assignments in custom 'build phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-08 11:00:05 +03:00
Morgan Smith 5c9954490c
gnu: gcc-arm-none-eabi: Fix C++ header location. 
Previously the C++ headers where installed in the include folder, overwriting
some C headers.

* gnu/packages/embedded.scm (gcc-arm-none-eabi-4.9)
[native-search-paths]: Add C++ header locations.
(gcc-arm-none-eabi-7-2018-q2-update)[native-search-paths]: Add C++
header locations.
(make-libstdc++-arm-none-eabi)[arguments]: Change C++ header install
location to include/c++.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-08 10:58:54 +03:00
Ricardo Wurmus e1a38cbad8
gnu: r-sn: Update to 2.0.0. 
* gnu/packages/statistics.scm (r-sn): Update to 2.0.0.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 2e36f4a1c4
gnu: r-sfsmisc: Update to 1.1-10. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-10.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 9493b3e9a7
gnu: r-e1071: Update to 1.7-6. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-6.
[propagated-inputs]: Add r-proxy.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus d98cecdd07
gnu: r-xml: Update to 3.99-0.6. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.6.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus d6fd6908c2
gnu: r-rsqlite: Update to 2.2.5. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.5.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus e2851d10db
gnu: r-catools: Update to 1.18.2. 
* gnu/packages/statistics.scm (r-catools): Update to 1.18.2.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 63c5888c43
gnu: r-dbplyr: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.1.1.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 55378aa21d
gnu: r-survival: Update to 3.2-10. 
* gnu/packages/statistics.scm (r-survival): Update to 3.2-10.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 971a997f75
gnu: r-stars: Update to 0.5-2. 
* gnu/packages/cran.scm (r-stars): Update to 0.5-2.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 0ec1b08a52
gnu: r-lwgeom: Update to 0.2-6. 
* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-6.
[inputs]: Add zlib.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 5a2602032f
gnu: r-ragg: Update to 1.1.2. 
* gnu/packages/cran.scm (r-ragg): Update to 1.1.2.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus ded1599829
gnu: r-textshaping: Update to 0.3.3. 
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.3.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 2224e02779
gnu: r-bbotk: Update to 0.3.2. 
* gnu/packages/cran.scm (r-bbotk): Update to 0.3.2.
 2021-04-08 03:10:13 +02:00
Ricardo Wurmus 6ec08e19b3
gnu: r-mlr3learners: Update to 0.4.5. 
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.4.5.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus ae3df456bb
gnu: r-mlr3misc: Update to 0.8.0. 
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.8.0.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus b83b2a3a4b
gnu: r-phangorn: Update to 2.6.3. 
* gnu/packages/cran.scm (r-phangorn): Update to 2.6.3.
[native-inputs]: Add r-knitr.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus 6e93ab0666
gnu: r-qtl: Update to 1.48-1. 
* gnu/packages/cran.scm (r-qtl): Update to 1.48-1.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus 3ba3fb71fb
gnu: r-altmeta: Update to 3.3. 
* gnu/packages/cran.scm (r-altmeta): Update to 3.3.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus ed5f5f0274
gnu: r-tidyposterior: Update to 0.1.0. 
* gnu/packages/cran.scm (r-tidyposterior): Update to 0.1.0.
[propagated-inputs]: Remove r-lifecycle; add r-tune and r-workflowsets.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus 7ac3cefc64
gnu: r-slider: Update to 0.2.1. 
* gnu/packages/cran.scm (r-slider): Update to 0.2.1.
[propagated-inputs]: Add r-ellipsis.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus 47d8e0c1ad
gnu: r-yardstick: Update to 0.0.8. 
* gnu/packages/cran.scm (r-yardstick): Update to 0.0.8.
[propagated-inputs]: Add r-vctrs.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus f5c72b2cd7
gnu: r-muhaz: Update to 1.2.6.3. 
* gnu/packages/cran.scm (r-muhaz): Update to 1.2.6.3.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus 3974902362
gnu: r-cpp11: Update to 0.2.7. 
* gnu/packages/cran.scm (r-cpp11): Update to 0.2.7.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus a387de2fa7
gnu: r-spatstat: Update to 2.1-0. 
* gnu/packages/cran.scm (r-spatstat): Update to 2.1-0.
 2021-04-08 03:10:12 +02:00
Ricardo Wurmus 3069514325
gnu: r-spatstat-linnet: Update to 2.1-1. 
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 2.1-1.
 2021-04-08 03:10:11 +02:00
Ricardo Wurmus 2ef03976f3
gnu: r-spatstat-core: Update to 2.0-0. 
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.0-0.
 2021-04-08 03:10:11 +02:00
Ricardo Wurmus b6aa3ada62
gnu: r-spatstat-geom: Update to 2.0-1. 
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.0-1.
[propagated-inputs]: Remove r-spatstat-sparse.
 2021-04-08 03:10:11 +02:00
Ricardo Wurmus 8561ce6a8c
gnu: r-spatstat-data: Update to 2.1-0. 
* gnu/packages/cran.scm (r-spatstat-data): Update to 2.1-0.
 2021-04-08 03:10:11 +02:00
Ricardo Wurmus 1134bab6d0
gnu: r-spatstat-sparse: Update to 2.0-0. 
* gnu/packages/cran.scm (r-spatstat-sparse): Update to 2.0-0.
 2021-04-08 03:10:11 +02:00
Ricardo Wurmus 35654c7285
gnu: r-spatstat-utils: Update to 2.1-0. 
* gnu/packages/cran.scm (r-spatstat-utils): Update to 2.1-0.
 2021-04-08 03:10:11 +02:00
Ricardo Wurmus 213d7e7649
gnu: r-shapforxgboost: Update to 0.1.1. 
* gnu/packages/cran.scm (r-shapforxgboost): Update to 0.1.1.
[propagated-inputs]: Remove r-lightgbm.
[native-inputs]: Add r-knitr.
 2021-04-08 03:10:11 +02:00