Commit graph

96919 commits

Author SHA1 Message Date
Ricardo Wurmus
259c003f02
gnu: r-biocdockermanager: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.8.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
6766fbb003
gnu: r-biocthis: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.6.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
b007802e4b
gnu: r-basilisk: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.8.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
90e56ba6e3
gnu: r-basilisk-utils: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.8.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
5d2c07021c
gnu: r-dir-expiry: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.4.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
3c65a7d577
gnu: r-genetclassifier: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.36.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
c4f8b5759a
gnu: r-minet: Update to 3.54.0.
* gnu/packages/bioconductor.scm (r-minet): Update to 3.54.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
395f152b92
gnu: r-biobtreer: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.8.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
24c13f9d64
gnu: r-bgeedb: Update to 2.22.0.
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.22.0.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
00025cdd23
gnu: r-bgeecall: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.12.1.
2022-05-28 23:19:43 +02:00
Ricardo Wurmus
460680ef90
gnu: r-beclear: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.12.0.
[propagated-inputs]: Remove r-outliers; add r-dixontest.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
64c3498d9f
gnu: r-megadepth: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.6.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
c2a8c4c248
gnu: r-ballgown: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.28.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
d57d65a628
gnu: r-sushi: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.34.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
8467426bba
gnu: r-guitar: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.12.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
80f63620c5
gnu: r-chromstar: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.22.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
93b59aca4c
gnu: r-snpstats: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.46.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
c784304f9b
gnu: r-pathview: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.36.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
c8f930d575
gnu: r-ldblock: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.26.0.
2022-05-28 23:19:42 +02:00
Ricardo Wurmus
564024c01f
gnu: r-kegggraph: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.56.0.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
ee71b376ec
gnu: r-gwascat: Update to 2.28.1.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.28.1.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
b6f77fdc87
gnu: r-gviz: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.40.1.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
97ea85bfcf
gnu: r-ggbio: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.44.0.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
534743333e
gnu: r-erma: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-erma): Update to 1.12.0.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
1b75b53a0e
gnu: r-catalyst: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.20.1.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
e4a8e6dab4
gnu: r-msmstests: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.34.0.
2022-05-28 23:19:41 +02:00
Ricardo Wurmus
d99da8bb1c
gnu: r-msmseda: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.34.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
f185bf805c
gnu: r-biocio: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.6.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
d34a40c4c0
gnu: r-msfeatures: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.4.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
ec7849c360
gnu: r-mscoreutils: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.8.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
9381702bbc
gnu: r-delayedmatrixstats: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.18.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
eca29a788b
gnu: r-sparsematrixstats: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.8.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
5f04cf7bdb
gnu: r-scran: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.24.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
9631f2190a
gnu: r-scater: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.24.0.
[propagated-inputs]: Add r-rcppml.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
a8fbcbdb7a
gnu: r-scuttle: Update to 1.6.2.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.6.2.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
816a1ba4dc
gnu: r-singler: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-singler): Update to 1.10.0.
2022-05-28 23:19:40 +02:00
Ricardo Wurmus
decd8480f6
gnu: r-singlecellexperiment: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.18.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
d9d9f78391
gnu: r-chromvar: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.18.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
3ef47df3b6
gnu: r-motifmatchr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.18.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
e213375069
gnu: r-maftools: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.12.0.
[propagated-inputs]: Add r-dnacopy.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
7c9793b3e8
gnu: r-tfbstools: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.34.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
bde757d11d
gnu: r-cner: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.32.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
18fd5759c7
gnu: r-beachmat: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.12.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
3db60a25a7
gnu: r-rhdf5lib: Update to 1.18.2.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.18.2.
[source]: Adjust snippet.
[arguments]: Update build phase 'do-not-use-bundled-hdf5.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
59519a14de
gnu: r-hdf5array: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.0.
2022-05-28 23:19:39 +02:00
Ricardo Wurmus
0b0bce3556
gnu: r-hitc: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.40.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
8b7e1da3b6
gnu: r-fithic: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.22.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
3c57f6d2a0
gnu: r-rgraphviz: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.40.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
c8e364b609
gnu: r-s4vectors: Update to 0.34.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.34.0.
2022-05-28 23:19:38 +02:00
Ricardo Wurmus
16419c4639
gnu: r-preprocesscore: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.58.0.
2022-05-28 23:19:38 +02:00