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134397 commits

Author SHA1 Message Date
Martin Becze 610f66cb45
gnu: Add go-gopkg-in-cheggaaa-pb-v1.
* gnu/packages/golang-xyz.scm (go-gopkg-in-cheggaaa-pb-v1): New variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: If46de99aca0d301aca18b088f57616d78fe90e19
2024-03-29 14:20:59 +00:00
Charles d84fb791f6
gnu: Add cl-charje.loop.
* gnu/packages/lisp-xyz.scm (sbcl-charje.loop, cl-charje.loop,
ecl-charje.loop): New variables.

Change-Id: I69cfc7a73a7632e4fa2204d729503b98e609070e
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2024-03-29 14:42:22 +01:00
Charles 048adac758
gnu: cl-binding-arrows: Update to 1.0.0-2.46bcba8.
* gnu/packages/lisp-xyz.scm (sbcl-binding-arrows): Update to 1.0.0-2.46bcba8.

Change-Id: I173f4b11c4bb6a51f916ee57bbe8e5cb01dc714a
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2024-03-29 14:33:13 +01:00
Sergio Pastor Pérez 04be2cd15a
gnu: Add compdb.
* gnu/packages/build-tools.scm (compdb): New variable.

Change-Id: Ia221f21f38e4def239b82654c678fbe42b995878
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-03-29 13:32:23 +01:00
Cayetano Santos 1a53bb08da
gnu: Add emacs-eglot-jl.
* gnu/packages/emacs-xyz.scm (emacs-eglot-jl): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Change-Id: I5ece71dd2dbbcd92632734e52ec1f0901337d2df
2024-03-29 13:27:21 +01:00
Sharlatan Hellseher 0ff72d105c
gnu: cl-json-pointer: Fix name for ECL build.
* gnu/packages/lisp-xyz.scm (ecl-cl-json-pointer): Fix variable name.

Change-Id: I35ee1c6a122ac6d77dae379be5218078c3012031
2024-03-28 19:10:30 +00:00
Liliana Marie Prikler ce999ae3a2
gnu: emacs-no-x: Skip integrity test on armhf-linux.
* gnu/packages/emacs.scm (emacs-no-x)[#:phases]<validate-runpath>: Move
checks to GExpression expansion.  Add check against armhf-linux.
2024-03-28 19:21:57 +01:00
Efraim Flashner daab3da504
gnu: u-boot-pine64-plus: Fix building on aarch64-linux.
* gnu/packages/bootloaders.scm (u-boot-sunxi64-packages)[arguments]:
Also search in inputs for input files.

Change-Id: Ibc0f6b0dfff5eb7c561b7361dcf0eac1839fad87
2024-03-28 17:39:42 +02:00
nafkhamdc d616e85ac8
gnu: python-upsetplot: Update to 0.9.0.
* gnu/packages/python-science.scm (python-upsetplot): Update to 0.9.0.
[source]: Remove obsolete snippet.
[arguments]: Remove custom check phase.
[build-system]: Use pyproject-build-system.

Change-Id: I68bcd6840577a12594e491e9fd5e114f9261f6c7
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-28 13:37:20 +01:00
Ricardo Wurmus fb95491645
gnu: python-pynacl: Use pyproject-build-system.
* gnu/packages/python-crypto.scm (python-pynacl)[build-system]: Use
pyproject-build-system.
[arguments]: Remove custom check phase.
[source]: Remove unnecessary substitution.

Change-Id: Idf2409022abde9f3a59e71cd1fa69ce9f1df6b1f
2024-03-28 13:27:04 +01:00
nafkhamdc 1da36e4db9
gnu: Add python-pytest-testmon.
* gnu/packages/python-check.scm (python-pytest-testmon): New variable.

Change-Id: Ia2e6034781898c04bd766145e0352060a975d479
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-28 13:08:34 +01:00
nafkhamdc b8f6b013b9
gnu: Add python-contexttimer.
* gnu/packages/python-xyz.scm (python-contexttimer): New variable.

Change-Id: I1ed35f1d0190f0e3a60095c7627b6c17552cb4cc
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-28 12:44:01 +01:00
nafkhamdc 4881c7d697
gnu: python-pynacl: Update to 1.5.0.
* gnu/packages/python-crypto.scm (python-pynacl): Update to 1.5.0.

Change-Id: Iadf81b8d67a5d4fa08fbcb9937afa86de33385dc
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-28 12:43:01 +01:00
Mehrad Mahmoudian aa6e357c55
gnu: r-varhandle: Update home page.
* gnu/packages/cran.scm (r-varhandle)[home-page]: Update to new URL.

Change-Id: I8bde12da1348d0fca7f9b9939bff2774ce2b767b
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-28 12:42:11 +01:00
Sharlatan Hellseher 0e8f7ee3a9
gnu: go-github-com-nbrownus-go-metrics-prometheus: Adjust inputs.
* gnu/packages/golang-xyz.scm (go-github-com-nbrownus-go-metrics-prometheus):
Adjust inputs.
[propagated-inputs]: Remove go-github-com-stretchr-testify.
[native-inputs]: Add go-github-com-stretchr-testify.

Change-Id: I9c409fe88e11273e79809772001b73ffa4ed7afa
2024-03-27 23:08:25 +00:00
Sharlatan Hellseher f10a02bdbf
gnu: go-github-com-nbrownus-go-metrics-prometheus: Fix indentation.
* gnu/packages/golng-xyz (go-github-com-nbrownus-go-metrics-prometheus):
Fix indentation.

Change-Id: I305e0a64fbb89ea073f30f7b91673628097fc263
2024-03-27 23:08:24 +00:00
Sharlatan Hellseher d02579c9a1
gnu: go-github-com-miekg-dns: Fix indentation.
* gnu/packages/golang-xyz (go-github-com-miekg-dns): Fix indentation.

Change-Id: I10f4a9e9e28dd2214e39225a26ec45a0b7f952cf
2024-03-27 23:08:24 +00:00
Sharlatan Hellseher faf948173f
gnu: go-github-com-cyberdelia-go-metrics-graphite: Fix indentation.
* gnu/packages/golang-xyz (go-github-com-cyberdelia-go-metrics-graphite):
Fix indentation.

Change-Id: Ia758dfd8f2ec683395eaace73617949a8ad897fe
2024-03-27 23:08:24 +00:00
Sharlatan Hellseher c9fe935a33
gnu: go-github-com-anmitsu-go-shlex: Fix indentation.
* gnu/packages/golang-xyz (go-github-com-anmitsu-go-shlex): Fix
indentation.

Change-Id: Ib47fbdf3a31a1442cd88ff12a9a2b6c437c283d9
2024-03-27 23:08:24 +00:00
Sharlatan Hellseher 90ec785f21
gnu: clipman: Refresh package style.
* gnu/packages/xdisorg.scm (clipman): Adjust indentation.
[arguments] <#:phases>: Rename 'patch to 'patch-wl-copy-path phase to
reflect the purpose. Revert default 'install-license-files phase.
[native-inputs]: Remove go-github-com-alecthomas-template and
go-github-com-alecthomas-units, they are propagated from
go-gopkg-in-alecthomas-kingpin-v2.

Change-Id: I5332906c126904ced595aa322be5f933c305c5f7
2024-03-27 23:08:18 +00:00
Sharlatan Hellseher cf5c8c4902
gnu: clipman: Simplify package.
* gnu/packages/xdisorg.scm (clipman):
[phases] <#:phases>: Adjust 'patch phase to relay on provided module
import path.
[inputs]: Remove go-github-com-alecthomas-kingpin; add
go-gopkg-in-alecthomas-kingpin-v2.

Change-Id: I3d9d82af29672ff94cdbd39b18ec4ed61b8e485f
2024-03-27 23:05:15 +00:00
Sharlatan Hellseher b58717b419
gnu: go-github-com-alecthomas-kingpin: Adjust inputs.
gnu/packages/golang-xyz.scm (go-github-com-alecthomas-kingpin)
[native-inputs]: Move go-github-com-alecthomas-units and
go-github-com-alecthomas-template from here ...
[propagated-inputs]: ... to here.

Change-Id: I841ea8cf29ef49008d7a725c9db96b963f263f7f
2024-03-27 23:05:15 +00:00
Sharlatan Hellseher f1911e65f9
gnu: Add go-gopkg-in-alecthomas-kingpin-v2.
* gnu/packages/golang-xyz.scm (go-gopkg-in-alecthomas-kingpin-v2): New variable.

Change-Id: I35a0919b30a191000e922882619e778187b5a0da
2024-03-27 23:05:15 +00:00
Sharlatan Hellseher 1c3bfe42e3
gnu: Add go-github-com-alecthomas-kingpin-v2.
* gnu/packages/golang-xyz.scm (go-github-com-alecthomas-kingpin-v2): New variable.
* gnu/packages/golang-xyz.scm (go-github-com-kingpin): Delete variable.

Change-Id: If40f318b960e29fd601602d26fd36dcc8fce9583
2024-03-27 23:05:15 +00:00
Sharlatan Hellseher 81a417aa3e
gnu: Add go-github-com-xhit-go-str2duration-v2.
* gnu/packages/golang-xyz.scm (go-github-com-xhit-go-str2duration-v2): New variable.

Change-Id: I30425e498db6dd8cb736eedffe006346973628ed
2024-03-27 23:05:15 +00:00
Sharlatan Hellseher 5ad619e0dc
gnu: clipman: Update to 1.6.2.
* gnu/packages/xdisorg.scm (clipman): Update to 1.6.2.

Change-Id: I389f93f2d43f1675f2b33694ba84711e42df4eaf
2024-03-27 22:59:02 +00:00
Sharlatan Hellseher 7b15e5334e
gnu: clipman: Fix source and home-page URL.
The URI https://github.com/yory8/clipman/ no longer exists. The new
project's URL was obtained from the Nix package.

* gnu/packages/xdisorg.scm (clipman) [source]: Fix URL.
[home-page]: As above.

Change-Id: I20e9f22780586ce14d925d5cf106e70de8209e1e
2024-03-27 22:59:02 +00:00
Sharlatan Hellseher dfd5b96459
gnu: go-github-com-alecthomas-units: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-alecthomas-units): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

* gnu/packages/xdisorg.scm: Remove (gnu packages golang).

Change-Id: I9a4d7da82c9ca1b3c4e0d07d97d8fcde30590e33
2024-03-27 22:58:44 +00:00
Sharlatan Hellseher d2dcd4c7e1
gnu: go-github-com-alecthomas-template: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-alecthomas-template): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: Iffdd88439819c526cd6dd940192bf48995bf76bc
2024-03-27 21:33:42 +00:00
Sharlatan Hellseher 2173e4a12e
gnu: go-github-com-alecthomas-kingpin: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-alecthomas-kingpin): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: Ib7609a82c96683809f81479f4eb13f43d85d4a2f
2024-03-27 21:33:28 +00:00
Sharlatan Hellseher f427ec7026
gnu: go-github-com-kballard-go-shellquote: Move to golang-xyz.
* gnu/packages/syncthing.scm (go-github-com-kballard-go-shellquote):
Move from here ...
* gnu/packages/golang-xyz.scm: ... to here.

* gnu/packages/xdisorg.scm: Remove (gnu packages syncthing).
Add (gnu packages golang-xyz).

Change-Id: I3ab4cbc55d8ca0ad8b7fec0130bdb935039f2841
2024-03-27 21:31:58 +00:00
Ricardo Wurmus c2c1098585
gnu: Add r-ggmosaic.
* gnu/packages/cran.scm (r-ggmosaic): New variable.

Change-Id: Ia399265c01a57074b0cfc29dde45e1900ccc26de
2024-03-27 17:50:57 +01:00
Ricardo Wurmus ca9d4d9448
gnu: Add r-productplots.
* gnu/packages/cran.scm (r-productplots): New variable.

Change-Id: I4b8105773e11791e57d6461e8c2b6c65ffc6c6a2
2024-03-27 17:50:57 +01:00
Marco Rimoldi 517c13624a
gnu: python-mysqlclient: Update to 2.2.4.
* gnu/packages/databases.scm (python-mysqlclient): Update to 2.2.4.
[arguments]<#:phases>: Remove 'fix-test phase.
[native-inputs]: Add pkg-config.

Change-Id: I57a0b84eb0d56f9cea619b226090cc1ccd84812b
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 23:17:10 +08:00
Marco Rimoldi 5a41d4a56d
gnu: python-mysqlclient: Enable selected tests.
* gnu/packages/databases.scm (python-mysqlclient)
[build-system]: Change to pyproject-build-system.
[arguments]
<#:phases>: Add 'fix-test phase.
<#:test-flags>: Specify tests to run.
[native-inputs]: Add python-pytest.
[inputs]: Replace mariadb:dev with mariadb-connector-c.
[home-page]: Update.

Change-Id: I5ae0873155f9a7cc90a318762b77864665fadc01
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 23:16:45 +08:00
Efraim Flashner 85e457a417
gnu: libtommath: Update to 1.3.0.
* gnu/packages/multiprecision.scm (libtommath): Update to 1.3.0.

Change-Id: If0b4758abb634f4e7564d90e8a5534ebdf6579a6
2024-03-27 17:05:49 +02:00
Jason Darby 0b38c9401b
home: services: bash: Reorder aliases.
Reported in <https://issues.guix.gnu.org/67652>.

* home/services/shells.scm (add-bash-configuration): Reorder aliases.

Change-Id: I288856bb6befe378ca60ef78578acc069cb18532
Reported-by: Atte Torri <atte.torri@universite-paris-saclay.fr>
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 22:25:19 +08:00
Nicolas Graves b5e359eb07
gnu: Add tree-sitter-matlab.
* gnu/packages/tree-sitter.scm (tree-sitter-matlab): New variable.

Change-Id: I5a72d20e18ed370852b9a6d3037d94675aad8c4b
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 22:24:04 +08:00
Paul A. Patience cd82bf824e
gnu: Add tree-sitter-ungrammar.
* gnu/packages/tree-sitter.scm (tree-sitter-ungrammar): New variable.

Change-Id: I162e1ffe692aaf0b81080e4df239bba10da477ed
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 22:23:58 +08:00
Paul A. Patience 424b81c745
gnu: Add tree-sitter-ron.
* gnu/packages/tree-sitter.scm (tree-sitter-ron): New variable.

Change-Id: I26abfa4a298b23a14bcea852c2974e694daddecd
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 22:23:53 +08:00
Paul A. Patience a4573ee607
gnu: Add tree-sitter-hcl.
* gnu/packages/tree-sitter.scm (tree-sitter-hcl): New variable.

Change-Id: I2522cf5cc30b313c16636821deed2752ea65b43e
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 22:23:48 +08:00
Paul A. Patience 6881f090cf
gnu: Add tree-sitter-kdl.
* gnu/packages/tree-sitter.scm (tree-sitter-kdl): New variable.

Change-Id: I40a9d9629e29d1682999d9787d4092775be23c19
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-03-27 22:23:43 +08:00
Hilton Chain 7995816ec4
linux-modules: Ignore nonexistent module files on boot.
This is a follow-up to 8f8ec56052, which only
covers building initrd, while the booting code still tries to load nonexistent
files for builtin modules.

* gnu/build/linux-modules.scm (load-linux-modules-from-directory): Ignore
nonexistent module files.

Change-Id: I09ef207e82397e915e671c8464b92bcf90f03dcf
2024-03-27 22:23:38 +08:00
nafkhamdc 3feb8f7f02
gnu: Add python-icecream.
* gnu/packages/python-xyz.scm (python-icecream): New variable.

Change-Id: I866d0ce591a1b81fdd7e0ee706cb8e9791e70c49
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-27 15:10:15 +01:00
nafkhamdc 64db5d6de3
gnu: Add python-pytest-relaxed.
* gnu/packages/check.scm (python-pytest-relaxed): New variable.

Change-Id: I9c506fe6a6586c87d72775a0567fd3c45ba03568
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-27 15:06:54 +01:00
Ricardo Wurmus a223b1e52b
gnu: r-bionero: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.10.2.

Change-Id: I419476f683156fa612b35680c5de3f8044851439
2024-03-27 14:20:57 +01:00
Ricardo Wurmus af70b1d39c
gnu: r-flowworkspace: Update to 4.14.3.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.3.

Change-Id: I2a717e99d7b71df0c3774ad235e0fe87f5b2aa19
2024-03-27 14:20:57 +01:00
Ricardo Wurmus 9c85ed3f54
gnu: r-rprotobuflib: Update to 2.14.1.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.14.1.

Change-Id: I10d2e5f7d7e55039085c51592b2046a340810a0a
2024-03-27 14:20:57 +01:00
Ricardo Wurmus 6506d63865
gnu: r-flowcore: Update to 2.14.2.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.14.2.

Change-Id: I61158d6b9243c4386149364ef0d36a0d1bd5e4b8
2024-03-27 14:20:57 +01:00
Ricardo Wurmus 684271cede
gnu: r-trackviewer: Update to 1.38.2.
* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.2.

Change-Id: I1b26ba59abbba23d8215a16fdf9bbb7e49e54260
2024-03-27 14:20:57 +01:00