Commit graph

67270 commits

Author SHA1 Message Date
Ricardo Wurmus 56bca8965a
gnu: r-atacseqqc: Update to 1.12.5.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.12.5.
2020-10-06 13:23:37 +02:00
Ricardo Wurmus f000fab88f
gnu: r-gosemsim: Update to 2.14.2.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.14.2.
2020-10-06 13:23:37 +02:00
Ricardo Wurmus d7314e4747
gnu: r-karyoploter: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.14.1.
2020-10-06 13:23:37 +02:00
Ricardo Wurmus dce2d06fcc
gnu: r-diffbind: Update to 2.16.2.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.16.2.
2020-10-06 13:23:34 +02:00
Efraim Flashner 49ae5f79ac
gnu: sbcl-cl-base64: Declare a source file-name.
* gnu/packages/lisp-xyz.scm (sbcl-cl-base64)[source]: Add file-name
field.
2020-10-06 13:46:35 +03:00
Efraim Flashner 186b8dff2a
gnu: memkind: Declare a source file-name.
* gnu/packages/disk.scm (memkind)[source]: Add file-name field.
2020-10-06 13:45:35 +03:00
Joseph LaFreniere a90964c982
gnu: python-tox: Update to 3.20.0.
* gnu/packages/python-xyz.scm (python-tox): Update to 3.20.0.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 11:45:29 +02:00
Joseph LaFreniere 5b7e8b595e
gnu: Add emacs-python-black.
* gnu/packages/emacs-xyz.scm (emacs-python-black): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 11:39:57 +02:00
Joseph LaFreniere d4a81f5b0c
gnu: Add python-black-macchiato.
* gnu/packages/python-xyz.scm (python-black-macchiato): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 11:39:57 +02:00
Alexandros Theodotou f7c031d155
gnu: zrythm: Update to 1.0.0-alpha.3.0.1.
* gnu/packages/music.scm (zrythm): Update to 1.0.0-alpha.3.0.1.
[arguments]: Explicitly enable RtMidi support in #:configure-flags.
<phases>: Remove xdg-open patch (no longer needed).

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 11:39:57 +02:00
Tobias Geerinckx-Rice 8416f0f26c
gnu: stockfish: Fix typo in description.
* gnu/packages/games.scm (stockfish)[description]: Fix typo.
2020-10-06 11:02:47 +02:00
Tobias Geerinckx-Rice 36c737a9c3
gnu: libbpf: Fix erroneous use of DESTDIR.
It broke the pkg-config file and is almost always a mistake.

* gnu/packages/linux.scm (libbpf)[arguments]: Correctly set PREFIX.
2020-10-06 11:02:47 +02:00
zimoun 2fb12dd1bb
build: svn: Handle fetch errors.
* guix/build/svn.scm (svn-fetch): Add 'guard' to handle errors.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 10:24:38 +02:00
zimoun a5a3f813c7
build: hg: Handle fetch errors.
* guix/build/hg.scm (hg-fetch): Add 'guard' to handle errors.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 10:24:37 +02:00
Michael Rohleder 32530a6650
gnu: chatty: Update to 0.1.16.
* gnu/packages/messaging.scm (chatty): Update to 0.1.16.
[inputs]: Add gsettings-desktop-schemas.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 10:07:26 +02:00
Joseph LaFreniere 89ca634050
gnu: emacs-dtrt-indent: Update to 1.2.
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): Update to 1.2.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 10:07:26 +02:00
Michael Rohleder 79fa492fb5
gnu: emacs-helpful: Update to 0.18.
* gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.18.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-10-06 10:07:25 +02:00
Danny Milosavljevic a6d78f2bba
gnu: Add memkind.
* gnu/packages/disk.scm (memkind): New variable.
2020-10-06 09:58:01 +02:00
Mathieu Othacehe 8a4f1eef98
images: Add pine64-barebones-raw-image.
* gnu/system/images/pine64.scm (pine64-barebones-raw-image): New variable.
* gnu/ci.scm (%guix-system-images): Add it.
2020-10-06 09:51:43 +02:00
Efraim Flashner c1cc0c4865
build-system/cargo: Don't install .crates.toml file.
Fixes <https://issues.guix.gnu.org/43810>.

* guix/build/cargo-build-system.scm (install): Remove installed
.crates.toml file.
2020-10-06 10:37:34 +03:00
Nicolas Goaziou 3b186ab72b
gnu: emacs-ivy-posframe: Update to 0.5.0.
* gnu/packages/emacs-xyz.scm (emacs-ivy-posframe): Update to 0.5.0.
2020-10-06 09:09:48 +02:00
Efraim Flashner 527b27f14c
gnu: vlang: Correctly refer to output directories.
* gnu/packages/vlang.scm (vlang)[arguments]: In custom 'install phase
correctly refer to 'outputs'.
2020-10-06 09:45:13 +03:00
Efraim Flashner 6450070b91
gnu: vlang: Use cc-for-target.
* gnu/packages/vlang.scm (vlang)[arguments]: Don't hardcode gcc in
make-flags. In custom 'patch-makefile, don't hardcode gcc.
2020-10-06 09:44:25 +03:00
Danny Milosavljevic 34d1c0a03b
services: dnsmasq: Add TFTP configuration fields.
* gnu/services/dns.scm (<dnsmasq-configuration>): Add TFTP configuration
fields.
(dnsmasq-shepherd-service): Use them.
* doc/guix.texi (DNS Services): Document them.
2020-10-06 08:13:39 +02:00
Maxim Cournoyer 3e34f89980
gnu: lsh: Enable some tests.
* gnu/packages/ssh.scm (lsh)[native-inputs]: Add autoconf and automake.
[arguments]: Remove #:tests? argument.
[phases]{disable-failing-tests}: New phase.
2020-10-05 23:52:24 -04:00
Maxim Cournoyer 0ec195ff02
gnu: lsh: Fix X11 forwarding.
Fixes <https://issues.guix.gnu.org/24049>.

* gnu/packages/patches/lsh-fix-x11-forwarding.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/ssh.scm (lsh)[source]: Apply it.
[inputs]: Add libxau.

Reported-by: myglc2 <myglc2@gmail.com>
2020-10-05 23:48:45 -04:00
Tobias Geerinckx-Rice fb81bd9e0b
gnu: perl-cgi: Update to 4.51.
* gnu/packages/web.scm (perl-cgi): Update to 4.51.
2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice f6a087a68f
gnu: python-flake8: Update to 3.8.4.
* gnu/packages/python-xyz.scm (python-flake8): Update to 3.8.4.
2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice f68cbccf5d
gnu: seahorse: Update to 3.36.2.
* gnu/packages/gnome.scm (seahorse): Update to 3.36.2.
2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice b8da9c30d4
gnu: s6-portable-utils: Update to 2.2.3.0.
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.3.0.
2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice f182b49c87
gnu: s6-dns: Update to 2.3.3.0.
* gnu/packages/skarnet.scm (s6-dns): Update to 2.3.3.0.
2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice 69ba32312b
gnu: obs: Update to 26.0.1.
* gnu/packages/video.scm (obs): Update to 26.0.1.
2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice 10ac3ea2e4
gnu: goffice: Update to 0.10.48.
* gnu/packages/gnome.scm (goffice): Update to 0.10.48.
2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice 05e9a46347
gnu: spice-protocol: Update to 0.14.3.
* gnu/packages/spice.scm (spice-protocol): Update to 0.14.3.
2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice 6c273ee433
gnu: Fix up package copyright headers. 2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice d3b9cbd9c8
gnu: libshout: Update to 2.4.4.
* gnu/packages/xiph.scm (libshout): Update to 2.4.4.
2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice ec7da7d628
gnu: vlang: Run mosts tests.
* gnu/packages/vlang.scm (vlang)[arguments]: Enable tests and add a new
‘delete-failing-tests’ and custom ‘check’ phase.
[native-inputs]: Add libx11, node, openssl, and sqlite.
2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice 84fa2ced47
gnu: vlang: Update to 0.1.29.
* gnu/packages/vlang.scm (vlang): Update to 0.1.29.
2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice 4af2cef5e9
gnu: execline: Update to 2.6.1.1.
* gnu/packages/skarnet.scm (execline): Update to 2.6.1.1.
2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice f4dfdacebe
gnu: skalibs: Update to 2.9.3.0.
* gnu/packages/skarnet.scm (skalibs): Update to 2.9.3.0.
2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice 0141d046b8
gnu: libde265: Update to 1.0.7.
* gnu/packages/video.scm (libde265): Update to 1.0.7.
2020-10-06 01:04:46 +02:00
Tobias Geerinckx-Rice f4f2a1e9c6
gnu: vim: Update to 8.2.1801.
* gnu/packages/vim.scm (vim): Update to 8.2.1801.
2020-10-06 01:04:46 +02:00
Tobias Geerinckx-Rice 0d7c75f0b8
gnu: youtube-viewer: Update to 3.7.9.
* gnu/packages/video.scm (youtube-viewer): Update to 3.7.9.
[inputs]: Add perl-memoize.
2020-10-06 01:04:46 +02:00
Ricardo Wurmus e02babf4c5
gnu: r-tclust: Update to 1.4-2.
* gnu/packages/statistics.scm (r-tclust): Update to 1.4-2.
2020-10-06 00:35:02 +02:00
Ricardo Wurmus c2d80d4ca9
gnu: r-car: Update to 3.0-10.
* gnu/packages/statistics.scm (r-car): Update to 3.0-10.
2020-10-06 00:35:02 +02:00
Ricardo Wurmus 58ad14b049
gnu: r-quantreg: Update to 5.73.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.73.
2020-10-06 00:35:02 +02:00
Ricardo Wurmus 32c573e3fd
gnu: r-fpc: Update to 2.2-8.
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-8.
2020-10-06 00:35:02 +02:00
Ricardo Wurmus 07d6afb695
gnu: r-gplots: Update to 3.1.0.
* gnu/packages/statistics.scm (r-gplots): Update to 3.1.0.
[propagated-inputs]: Remove r-gdata.
2020-10-06 00:35:02 +02:00
Ricardo Wurmus d92b3555bd
gnu: r-matrixstats: Update to 0.57.0.
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.57.0.
2020-10-06 00:35:02 +02:00
Ricardo Wurmus 16d41d0d65
gnu: r-rsqlite: Update to 2.2.1.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.1.
[native-inputs]: Add r-knitr.
2020-10-06 00:35:02 +02:00