Commit graph

29161 commits

Author SHA1 Message Date
Ricardo Wurmus
3ede1550e8
gnu: cutadapt: Update to 1.16.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.16.
[source]: Fetch via git.
[arguments]: Remove.
[native-inputs]: Replace python-nose with python-pytest.
2018-03-02 23:44:16 +01:00
Ricardo Wurmus
62a4b952c0
gnu: python-xopen: Update to 0.3.2.
* gnu/packages/python.scm (python-xopen): Update to 0.3.2.
2018-03-02 23:43:55 +01:00
Ricardo Wurmus
fa5965990d
gnu: Add r-hpar.
* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-02 23:24:57 +01:00
Ricardo Wurmus
2a112be09a
gnu: Add r-powerplus.
* gnu/packages/cran.scm (r-powerplus): New variable.
2018-03-02 23:07:26 +01:00
Ricardo Wurmus
d976454c6b
gnu: Add r-np.
* gnu/packages/cran.scm (r-np): New variable.
2018-03-02 23:07:20 +01:00
Ricardo Wurmus
7b81a7eabf
gnu: Add r-phontools.
* gnu/packages/cran.scm (r-phontools): New variable.
2018-03-02 23:07:12 +01:00
Ricardo Wurmus
68b6a67e94
gnu: Add r-complexplus.
* gnu/packages/cran.scm (r-complexplus): New variable.
2018-03-02 23:07:04 +01:00
Ricardo Wurmus
f96eda90d5
gnu: Add r-expm.
* gnu/packages/cran.scm (r-expm): New variable.
2018-03-02 23:06:57 +01:00
Ricardo Wurmus
7531ee842c
gnu: Add r-trend.
* gnu/packages/cran.scm (r-trend): New variable.
2018-03-02 23:06:50 +01:00
Ricardo Wurmus
d32e572489
gnu: Add r-cubature.
* gnu/packages/cran.scm (r-cubature): New variable.
2018-03-02 23:06:41 +01:00
Ricardo Wurmus
6615a36421
gnu: Add r-urca.
* gnu/packages/cran.scm (r-urca): New variable.
2018-03-02 23:06:33 +01:00
Ricardo Wurmus
5b25bc55dc
gnu: Add r-fractal.
* gnu/packages/cran.scm (r-fractal): New variable.
2018-03-02 23:06:26 +01:00
Ricardo Wurmus
19da7fe314
gnu: Add r-extradistr.
* gnu/packages/cran.scm (r-extradistr): New variable.
2018-03-02 23:06:17 +01:00
Ricardo Wurmus
4993a02ad7
gnu: Add r-tsa.
* gnu/packages/cran.scm (r-tsa): New variable.
2018-03-02 23:06:10 +01:00
Ricardo Wurmus
a2c079a780
gnu: Add r-wmtsa.
* gnu/packages/cran.scm (r-wmtsa): New variable.
2018-03-02 23:06:00 +01:00
Ricardo Wurmus
b6dc325538
gnu: Add r-tseries.
* gnu/packages/cran.scm (r-tseries): New variable.
2018-03-02 23:05:52 +01:00
Ricardo Wurmus
dceb159206
gnu: Add r-quantmod.
* gnu/packages/cran.scm (r-quantmod): New variable.
2018-03-02 23:05:43 +01:00
Ricardo Wurmus
0be7effefa
gnu: Add r-sapa.
* gnu/packages/cran.scm (r-sapa): New variable.
2018-03-02 23:05:35 +01:00
Ricardo Wurmus
034ac9d67a
gnu: Add r-ifultools.
* gnu/packages/cran.scm (r-ifultools): New variable.
2018-03-02 23:05:14 +01:00
Ricardo Wurmus
d3cb62e58d
gnu: Add r-splus2r.
* gnu/packages/cran.scm (r-splus2r): New variable.
2018-03-02 23:05:02 +01:00
Ricardo Wurmus
0b64332c74
gnu: Add r-leaps.
* gnu/packages/cran.scm (r-leaps): New variable.
2018-03-02 23:03:10 +01:00
Ricardo Wurmus
93c21ddc86
gnu: Add r-ttr.
* gnu/packages/cran.scm (r-ttr): New variable.
2018-03-02 22:55:10 +01:00
Ricardo Wurmus
4e35c4290e
gnu: Add r-rbiofabric.
* gnu/packages/graph.scm (r-rbiofabric): New variable.
2018-03-02 22:23:18 +01:00
Ricardo Wurmus
1088744d87
gnu: Add r-sna.
* gnu/packages/cran.scm (r-sna): New variable.
2018-03-02 22:23:18 +01:00
Ricardo Wurmus
07a2f34d5c
gnu: Add r-statnet-common.
* gnu/packages/cran.scm (r-statnet-common): New variable.
2018-03-02 22:23:18 +01:00
Ricardo Wurmus
5f4565b18f
gnu: Add r-network.
* gnu/packages/cran.scm (r-network): New variable.
2018-03-02 22:23:18 +01:00
Tobias Geerinckx-Rice
b01a1b34f2
gnu: nghttp2: Update to 1.31.0.
* gnu/packages/web.scm (nghttp2): Update to 1.31.0.
2018-03-02 15:52:57 +01:00
Tobias Geerinckx-Rice
6fda93e6c8
gnu: libpsl: Update to 0.20.1.
* gnu/packages/web.scm (libpsl): Update to 0.20.1.
2018-03-02 15:52:57 +01:00
Tobias Geerinckx-Rice
5658b4ce69
gnu: zerofree: Update to 1.1.1.
* gnu/packages/linux.scm (zerofree): Update to 1.1.1.
2018-03-02 15:52:57 +01:00
Tobias Geerinckx-Rice
a40f732bb6
gnu: python-webencodings: Fix typo in description.
* gnu/packages/python-web.scm (python-webencodings)[description]: Fix typo.
2018-03-02 15:52:57 +01:00
Tobias Geerinckx-Rice
139ecdee8e
gnu: delta: Remove redundant code.
* gnu/packages/debug.scm (delta)[arguments]: Remove unneeded MKDIR-P
calls.
2018-03-02 15:52:56 +01:00
Tobias Geerinckx-Rice
defe0282c2
gnu: perl-mozilla-ca: Update to 20180117.
* gnu/packages/perl.scm (perl-mozilla-ca): Update to 20180117.
2018-03-02 15:52:56 +01:00
Tobias Geerinckx-Rice
dc8584d2b1
gnu: perl-test-harness: Update to 3.41.
* gnu/packages/perl-check.scm (perl-test-harness): Update to 3.41.
2018-03-02 15:52:56 +01:00
Tobias Geerinckx-Rice
6e48fbb19a
gnu: highlight: Don't hard-code Lua version.
* gnu/packages/pretty-print.scm (highlight)[arguments]: Construct the
Lua prefix programatically instead of hard-coding it.
2018-03-02 15:52:56 +01:00
Tobias Geerinckx-Rice
3a5c02777d
gnu: highlight: Update to 3.42.
* gnu/packages/pretty-print.scm (highlight): Update to 3.42.
2018-03-02 15:52:55 +01:00
Tobias Geerinckx-Rice
467834d550
gnu: ghc-abstract-deque: Fix typos in description.
* gnu/packages/haskell.scm (ghc-abstract-deque)[description]: Fix typos.
2018-03-02 15:52:55 +01:00
Tobias Geerinckx-Rice
d338321ddb
gnu: qscintilla: Use HTTPS home page.
* gnu/packages/qt.scm (qscintilla)[home-page]: Use HTTPS.
2018-03-02 15:52:55 +01:00
Tobias Geerinckx-Rice
2c1cc27f8f
gnu: fortify-headers: Update to 0.9.
* gnu/packages/suckless.scm (fortify-headers): Update to 0.9.
2018-03-02 15:52:55 +01:00
Tobias Geerinckx-Rice
5c0f68e844
gnu: fossil: Update phase style.
* gnu/packages/version-control.scm (fossil)[arguments]: Substitute
INVOKE for SYSTEM* and end phases with #t.
2018-03-02 15:52:54 +01:00
Tobias Geerinckx-Rice
f136c8f23d
gnu: gnome-mpv: Update to 0.14.
* gnu/packages/video.scm (gnome-mpv): Update to 0.14.
2018-03-02 15:52:54 +01:00
Tobias Geerinckx-Rice
65a3c342b0
gnu: ath9k-htc-firmware: Use INSTALL-FILE.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Substitute
INSTALL-FILE for COPY-FILE with MKDIR-P.
2018-03-02 15:52:54 +01:00
Tobias Geerinckx-Rice
f563d19904
gnu: ovmf: Update phase style.
* gnu/packages/firmware.scm (ovmf): Substitute INVOKE for SYSTEM* and
end phases with #t.
2018-03-02 15:52:54 +01:00
Tobias Geerinckx-Rice
0dae492195
gnu: ovmf: Use HTTPS home page.
* gnu/packages/firmware.scm (ovmf)[home-page]: Use HTTPS.
2018-03-02 15:52:54 +01:00
Tobias Geerinckx-Rice
3ebf12ea0e
gnu: b43-tools: Use HTTPS home page.
* gnu/packages/firmware.scm (b43-tools)[home-page]: Use HTTPS.
2018-03-02 15:52:53 +01:00
Tobias Geerinckx-Rice
315c89f5ba
gnu: b43-tools: Update phase style.
* gnu/packages/firmware.scm (b43-tools)[arguments]: Substitute INVOKE
for SYSTEM* and FOR-EACH for EVERY, and end phases with #t.
2018-03-02 15:52:53 +01:00
Tobias Geerinckx-Rice
bb5c358204
gnu: b43-tools: Update to 0.0.0-1.27892ef.
* gnu/packages/firmware.scm (b43-tools): Update to 0.0.0-1.27892ef.
[version]: Use our standard versioning scheme.
2018-03-02 15:52:53 +01:00
Tobias Geerinckx-Rice
12adfdf0b6
gnu: Update (gnu packages python-web) phase styles.
* gnu/packages/python-web.scm (python-openid, python-terminado)
(python-geventhttpclient, python-cachecontrol, python-webencodings)
(python-s3transfer)[arguments]: Substitute INVOKE for SYSTEM* and end
phases with #t.
2018-03-02 15:52:53 +01:00
Tobias Geerinckx-Rice
6a192184ec
gnu: python-flask-script: Update to 2.0.6.
* gnu/packages/python-web.scm (python-flask-script): Update to 2.0.6.
2018-03-02 15:52:52 +01:00
Tobias Geerinckx-Rice
05075433a2
gnu: python-htmlmin: Update to 0.1.12.
* gnu/packages/python-web.scm (python-htmlmin): Update to 0.1.12.
2018-03-02 15:52:52 +01:00
Tobias Geerinckx-Rice
bda82eff18
gnu: python-s3transfer: Update to 0.1.13.
* gnu/packages/python-web.scm (python-s3transfer): Update to 0.1.13.
2018-03-02 15:52:52 +01:00