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Author SHA1 Message Date
BonfaceKilz f2b2016bfd
gnu: Add python-hissp. 
* gnu/packages/python-xyz.scm (python-hissp): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-29 10:01:16 +03:00
Kei Kebreau 685e4733ad
gnu: xaos: Update to 4.2.1. 
* gnu/packages/maths.scm (xaos): Update to 4.2.1.
[arguments]: Patch call to "lrelease" in XaoS.pro.
 2021-04-29 00:44:03 -04:00
Vagrant Cascadian d018a11ee0
gnu: linux-libre-arm64-generic@5.10: Add eDP panel, audio and battery 
support for Pinebook Pro.

* gnu/packages/linux.scm (linux-libre-5.10-source): Add pinebook pro lcd patch.
  (linux-libre-arm64-generic-5.10): Add audio and battery modules.
 2021-04-28 16:56:58 -07:00
Vagrant Cascadian e7fbf10066
gnu: linux-libre-arm64-generic: Add eDP panel, battery and audio 
support for Pinebook Pro.

* gnu/packages/linux.scm (linux-libre-5.11-source): Add Pinebook Pro
  lcd patch.
  (linux-libre-arm64-generic): Enable audio and battery modules for
  Pinebook Pro.
* gnu/packages/patches/linux-libre-arm64-generic-pinebook-lcd.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
 2021-04-28 16:56:35 -07:00
Ludovic Courtès 9dc1c591a4
inferior: Make sure test refers to guile@3.0. 
* tests/inferior.scm ("inferior-package-inputs"): Compare with
GUILE-3.0-LATEST since that's what 'lookup-inferior-packages' returns.
 2021-04-29 01:22:04 +02:00
Ludovic Courtès 524c9800af
diagnostics, ui: Adjust to 'read-error' and 'syntax-error' in Guile 3.0.6. 
* guix/diagnostics.scm (source-properties->location): Add clause for
vectors.
* guix/ui.scm (report-load-error): Tweak 'read-error' handling for 3.0.6.
* tests/guix-package.sh: Relax regexp for the "unbound variable"
diagnostic check.
* tests/guix-system.sh: Adjust "missing closing paren" check for 3.0.6.
* tests/records.scm (location-alist): New procedure.
("define-record-type* & wrong field specifier")
("define-record-type* & wrong field specifier, identifier")
("define-record-type* & duplicate initializers"): Use it.
 2021-04-29 01:22:04 +02:00
Ludovic Courtès 0ce1b28151
packages: 'package-with-patches' preserves package location. 
* guix/packages.scm (package-with-patches): Preserve the 'location'
field of ORIGINAL.
 2021-04-29 01:22:04 +02:00
Xinglu Chen 0d570b6019
gnu: emacs-hyperbole: Install images and help files. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole)[arguments]: Include help file
and install images for the manual.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-29 00:29:41 +02:00
Xinglu Chen 43684b19da
gnu: emacs-corfu: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.4.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-29 00:25:29 +02:00
Leo Famulari 22b3dd559c
gnu: isc-dhcp: Update bundled BIND to 9.11.31 [security fixes]. 
Fixes CVE-2021-{25214,25215,25216].

* gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bundled BIND to 9.11.31.
 2021-04-28 17:26:05 -04:00
Tobias Geerinckx-Rice b95f422714
gnu: bind: Update to 9.16.15 [fixes CVE-2021-25214, CVE-2021-25215, CVE-2021-25216]. 
* gnu/packages/dns.scm (isc-bind): Update to 9.16.15.
 2021-04-28 22:35:13 +02:00
Leo Famulari 958613f1af
gnu: linux-libre 4.4: Update to 4.4.268. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.268.
(linux-libre-4.4-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari cdd22eacae
gnu: linux-libre 4.9: Update to 4.9.268. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.268.
(linux-libre-4.9-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari a3535c4383
gnu: linux-libre 4.14: Update to 4.14.232. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.232.
(linux-libre-4.14-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari 75d8067779
gnu: linux-libre 4.19: Update to 4.19.189. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.189.
(linux-libre-4.19-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari 3d1c37122e
gnu: linux-libre 5.4: Update to 5.4.115. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.115.
(linux-libre-5.4-pristine-source): Update hash.
 2021-04-28 16:32:53 -04:00
Leo Famulari 4499655166
gnu: linux-libre 5.10: Update to 5.10.33. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.33.
(linux-libre-5.10-pristine-source): Update hash.
 2021-04-28 16:32:53 -04:00
Leo Famulari 82eb714cb3
gnu: linux-libre: Update to 5.11.17. 
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.17.
(linux-libre-5.11-pristine-source): Update hash.
 2021-04-28 16:32:47 -04:00
Marius Bakke 2b063d92d2
.guix-authorizations: Remove lle_bout. 
* .guix-authorizations: Remove lle_bout from the committers.
 2021-04-28 22:03:18 +02:00
Ricardo Wurmus e7707d5262
gnu: pigx-bsseq: Update to 0.1.3. 
* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.3.
[inputs]: Add r-ggbio, r-matrixstats, and r-reshape2.
 2021-04-28 21:58:05 +02:00
Tobias Geerinckx-Rice 7f9888516f
gnu: ustr: Don't use vsnprintf. 
This follows up on 1059d1570b,
which caused new tests failures on non-cross builds.

* gnu/packages/textutils.scm (ustr)[arguments]: Return "0" for
./autoconf_vsnprintf.
 2021-04-28 21:41:20 +02:00
Nicolas Goaziou bbdd43fd11
gnu: giac: Update to 1.7.0-3. 
* gnu/packages/algebra.scm (giac): Update to 1.7.0-3.
 2021-04-28 21:37:16 +02:00
Nicolas Goaziou 510fbf7f93
gnu: python-pikepdf: Update to 2.11.4. 
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.11.4.
 2021-04-28 21:30:39 +02:00
Nicolas Goaziou 00c06f3aae
gnu: emacs-auctex: Update to 13.0.10. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.10.
 2021-04-28 21:27:26 +02:00
Tobias Geerinckx-Rice 1059d1570b
gnu: ustr: Cross-compile. 
Also fix <http://issues.guix.gnu.org/48084>.

* gnu/packages/text-utils.scm (ustr)[arguments]: Use CC-FOR-TARGET.
Add a new 'fix-cross-compilation phase.
 2021-04-28 20:48:22 +02:00
Tobias Geerinckx-Rice f3b2d6681c
gnu: less: Update to 581.2. 
* gnu/packages/less.scm (less): Update to 581.2.
 2021-04-28 19:11:14 +02:00
Tobias Geerinckx-Rice a8dde2fd17
gnu: iproute2: Update to 5.12.0. 
* gnu/packages/linux.scm (iproute2): Update to 5.12.0.
 2021-04-28 19:11:13 +02:00
Tobias Geerinckx-Rice 9dbedb8bae
gnu: folly: Update to 2021.04.26.00. 
* gnu/packages/cpp.scm (folly): Update to 2021.04.26.00.
 2021-04-28 19:11:13 +02:00
Tobias Geerinckx-Rice 97d9814167
gnu: xsimd: Update to 7.5.0. 
* gnu/packages/cpp.scm (xsimd): Update to 7.5.0.
 2021-04-28 19:11:13 +02:00
Tobias Geerinckx-Rice 794bb59b19
gnu: fcitx-qt5: Update to 1.2.6. 
* gnu/packages/fcitx.scm (fcitx-qt5): Update to 1.2.6.
 2021-04-28 19:11:12 +02:00
Marius Bakke 8dcbd8a374
gnu: ungoogled-chromium: Update to 90.0.4430.93. 
* gnu/packages/patches/ungoogled-chromium-system-nspr.patch,
gnu/packages/patches/ungoogled-chromium-system-opus.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 90.
(debian-patch): Make REVISION optional, default to %DEBIAN-REVISION.
(%chromium-version): New variable.
(%ungoogled-revision): Set to 90.0.4430.85-1-11-g3184907.
(%debian-revision): Set to debian/90.0.4430.85-1.
(%debian-patches): Add more patches; update hashes.
(%ungoogled-origin): Update hash.
(%guix-patches): Remove obsolete patches.
(libvpx/chromium): Update to 1.9.0-147-g61edec1ef.
(ungoogled-chromium)[version]: Base on %CHROMIUM-REVISION and the last
component of %UNGOOGLED-REVISION, a 'git describe --long' style ID.
[arguments]: Add build_with_flite_lib in #:configure-flags.  Add openjpeg
substitution in #:phases.
 2021-04-28 17:59:32 +02:00
Marius Bakke cc03603514
gnu: uBlock Origin: Update to 1.35.0. 
* gnu/packages/browser-extensions.scm (uassets): Update to edfb13aae.
(ublock-origin): Update to 1.35.0.
 2021-04-28 17:59:32 +02:00
Marius Bakke 8fa86141b7
gnu: LLVM, Clang: Add 12.0.0. 
* gnu/packages/patches/clang-12-tools-extra-directory.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm-12, clang-runtime-12, clang-12,
clang-toolchain-12): New variables.
(llvm-11): Inherit from LLVM-12.
 2021-04-28 17:59:32 +02:00
Ricardo Wurmus 01e33a031e
gnu: Add lofreq. 
* gnu/packages/bioinformatics.scm (lofreq): New variable.
 2021-04-28 17:41:47 +02:00
Mathieu Othacehe 95b3fc12bc
tests: Add gui-uefi-installed-os test. 
* gnu/installer/tests.scm (conclude-installation): Rename it into ...
(start-installation): ... this new procedure.
(complete-installation): New procedure.
(choose-partitioning): Add an uefi-support? argument.
* gnu/tests/install.scm (uefi-firmware): New procedure.
(run-install, qemu-command/writable-image, gui-test-program,
installation-target-os-for-gui-tests): Add an uefi-support? argument.
(%extra-packages): Add grub-efi, fatfsck/static and dosfstools.
(%test-gui-installed-os): New variable.
 2021-04-28 15:51:12 +02:00
Mathieu Othacehe af7a615c5b
installer: Add MSDOS disk label support on UEFI systems. 
Fixes: <https://issues.guix.gnu.org/47889>.

* gnu/installer/parted.scm (esp-partition?): Remove the MSDOS check.
(auto-partition!): On MSDOS disks, check if an ESP partition is present. If
that's the case, do not remove it. Otherwise, if UEFI is supported, create
one.
 2021-04-28 15:50:02 +02:00
Mathieu Othacehe 3f8ea83e2a
installer: Force GPT disk label when UEFI is supported. 
* gnu/installer/newt/partition.scm (run-label-page): Force the GPT disk label
when UEFI is supported.
 2021-04-28 15:49:53 +02:00
Ricardo Wurmus f01b3cd063
gnu: kraken2: Replace references to rsync. 
* gnu/packages/bioinformatics.scm (kraken2)[inputs]: Add rsync.
[arguments]: Replace references to rsync; use WITH-DIRECTORY-EXCURSION to
avoid repeating "scripts".
 2021-04-28 14:50:50 +02:00
Efraim Flashner f7ff886213
gnu: global: Fix cross compiling. 
Coreutils was removed during patch review erroneously.
Reported by Maxime Devos <maximedevos@telenet.be>.

* gnu/packages/code.scm (global)[inputs]: Add coreutils.
 2021-04-28 14:41:31 +03:00
Mathieu Othacehe f97e220b45
ci: Add custom subset. 
* gnu/ci.scm (cuirass-jobs): Add 'custom susbset.
 2021-04-28 11:53:33 +02:00
Mathieu Othacehe 3034f3d05b
ci: Add arguments->systems procedure. 
* gnu/ci.scm (arguments->systems): New procedure.
(cuirass-jobs): Use it.
 2021-04-28 11:53:32 +02:00
Mathieu Othacehe 996b5edf51
ci: Factorize image->job procedure. 
* gnu/ci.scm (image-jobs): Extract ->job procedure into ...
(image->job): ... this new procedure.
 2021-04-28 11:53:32 +02:00
luhui 93242b54e4
gnu: global: Fix globash. 
* gnu/packages/code.scm (global)[arguments]: Add 'fix-globash phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-28 12:25:09 +03:00
Ricardo Wurmus 5ea5ea6066
gnu: Add python-pyliftover. 
* gnu/packages/bioinformatics.scm (python-pyliftover): New variable.
 2021-04-28 10:52:12 +02:00
Efraim Flashner 562c3a4e12
gnu: keepassxc: Wrap binary with wrap-qt-program. 
* gnu/packages/password-utils.scm (keepassxc)[arguments]: Import
qt-utils module. Replace custom 'wrap-bin phase with 'wrap-qt phase.
 2021-04-28 11:43:34 +03:00
Ricardo Wurmus d027637026
gnu: slurm: Link plugins with libslurm. 
* gnu/packages/parallel.scm (slurm)[arguments]: Add phase
patch-plugin-linker-flags to link plugins with libslurm; run autoconf phase
after this new phase.
 2021-04-28 10:18:07 +02:00
Ricardo Wurmus ffd5bc9600
gnu: krona-tools: Install download scripts. 
* gnu/packages/web.scm (krona-tools)[inputs]: Add curl and make.
[arguments]: Patch and install update scripts to /share.
 2021-04-28 10:18:07 +02:00
Ricardo Wurmus fe28f395bc
gnu: krona-tools: Update to 2.8. 
* gnu/packages/web.scm (krona-tools): Update to 2.8.
 2021-04-28 10:18:07 +02:00
Timothy Sample e74250c3c5
Revert "download: Use Disarchive as a last resort." 
This reverts commit 66b14dccdd, which broke
'guix pull'.
 2021-04-28 00:24:28 -04:00
Leo Famulari 1f6854bd06
gnu: Add mmc-utils. 
* gnu/packages/disk.scm (mmc-utils): New variable.
 2021-04-28 00:01:17 -04:00