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Maxim Cournoyer ece8e75902
gnu: python-locust: Update to 2.8.6. 
* gnu/packages/benchmark.scm (python-locust): Update to 2.8.6.
[phases]{relax-requirements}: New phase.
{check}: Skip the test_distributed_shape test.
[propagated-inputs]: Add python-jinja2.
 2022-05-12 12:46:04 -04:00
Maxim Cournoyer bb22c1ba5d
gnu: python-cantools: Update to 37.0.7. 
* gnu/packages/python-xyz.scm (python-cantools): Update to 37.0.7.
[arguments]: Use gexps.
[phases]: Strip trailing #t.
{build-doc}: Use make -C instead of with-directory-excursion.
{install-doc}: Adjust for gexp.
[native-inputs]: Use new style.
[propagated-inputs]: Add python-argparse-addons, python-crccheck,
python-matplotlib and python-parameterized.
 2022-05-12 12:46:03 -04:00
Maxim Cournoyer 1341779f84
gnu: Add python-crccheck. 
* gnu/packages/python-xyz.scm (python-crccheck): New variable.
 2022-05-12 12:46:03 -04:00
Maxim Cournoyer 4fe4943ba6
gnu: python-mkdocs: Update to 1.3.0. 
* gnu/packages/python-xyz.scm (python-mkdocs): Update to 1.3.0.
[source]: Use git.
[phases]{check}: New override.
[propagated-inputs]: Remove python-livereload, python-lunr and
python-tornado.  Add python-babel, python-ghp-import,
python-importlib-metadata, python-markupsafe, python-mdx-gh-links,
python-mergedeep, python-packaging, python-pyyaml-env-tag and python-watchdog.
 2022-05-12 12:46:03 -04:00
Maxim Cournoyer c507802903
gnu: Add python-mdx-gh-links. 
* gnu/packages/python-xyz.scm (python-mdx-gh-links): New variable.
 2022-05-12 12:46:02 -04:00
Maxim Cournoyer 03f26438e0
gnu: python-ghp-import: Update to 2.0.2. 
* gnu/packages/version-control.scm (python-ghp-import): Update to 2.0.2.
[propagated-inputs]: Add python-dateutil.
(python2-ghp-import): Delete variable.
 2022-05-12 12:46:02 -04:00
Maxim Cournoyer e051e00fef
gnu: Add python-pyyaml-env-tag. 
* gnu/packages/python-xyz.scm (python-pyyaml-env-tag): New variable.
 2022-05-12 12:46:02 -04:00
Maxim Cournoyer 9152574009
gnu: Add python-mergedeep. 
* gnu/packages/python-xyz.scm (python-mergedeep): New variable.
 2022-05-12 12:46:02 -04:00
Maxim Cournoyer abca2b8047
gnu: python-multipart: Fix build with PyYAML 6. 
* gnu/packages/python-xyz.scm (python-multipart)
[phases]{patch-test-suite}: Substitute yaml.load for yaml.safe_load.
 2022-05-12 12:46:01 -04:00
Maxim Cournoyer d45727f4e4
gnu: sshoot: Update to 1.5.1. 
* gnu/packages/vpn.scm (sshoot): Update to 1.5.1.
[phases]: Delete trailing #t.
{check}: Override phase.
[inputs]: Add python-pyxdg and python-toolrack.
[native-inputs]: Delete python-fixtures, python-pbr and python-testtools.  Add
python-pytest and python-pytest-mock.
 2022-05-12 12:46:01 -04:00
Maxim Cournoyer 10ea06342a
gnu: Add python-toolrack. 
* gnu/packages/python-xyz.scm (python-toolrack): New variable.
 2022-05-12 12:46:01 -04:00
Maxim Cournoyer 54f67e382e
gnu: python-bitstruct: Update to 8.14.0. 
* gnu/packages/python-xyz.scm (python-bitstruct): Update to 8.14.0.
 2022-05-12 12:46:00 -04:00
Maxim Cournoyer 2380d68227
gnu: Add python-argparse-addons. 
* gnu/packages/python-xyz.scm (python-argparse-addons): New variable.
 2022-05-12 12:46:00 -04:00
Maxim Cournoyer f35d65707c
gnu: python-celery: Update to 5.2.6 and enable tests. 
* gnu/packages/python-xyz.scm (python-celery): Update to 5.2.6.
[tests?]: Delete argument.
[phases]{delete-integration-tests}: Delete phase.
{relax-requirements}: New phase.
{check}: Ignore the "t/integration" directory and the
t/unit/backends/test_mongodb.py file.  Remove skip directive for
test_all_reqs_enabled_in_tests.
[native-inputs]: Add python-dnspython.
[propagated-inputs]: Delete python-boto3 and python-cryptography.
 2022-05-12 12:46:00 -04:00
Maxim Cournoyer daf2b25755
gnu: python-kombu: Update to 5.2.4. 
* gnu/packages/python-xyz.scm (python-kombu): Update to 5.2.4.
[phases]{delete-transport-tests}: Delete phase.
{check}: New phase.
[native-inputs]: Remove python-mock.
 2022-05-12 12:46:00 -04:00
Maxim Cournoyer e8dc6ec5d8
gnu: python-amqp: Update to 5.1.1 and enable tests. 
* gnu/packages/python-xyz.scm (python-amqp): Update to 5.1.1.
[arguments]: New field.
[native-inputs]: Add python-pytest.
 2022-05-12 12:45:59 -04:00
Maxim Cournoyer 8f3eb93cb0
gnu: python-can: Update to 4.0.0. 
* gnu/packages/python-xyz.scm (python-can): Update to 4.0.0.
[phases]: Strip trailing #t.
{relax-version-requirements}: Relax pytest-cov requirement.
{check}: Override phase.
[propagated-inputs]: Remove python-aenum.  Add python-msgpack and
python-typing-extensions.
[native-inputs]: Add python-parameterized.
 2022-05-12 12:45:59 -04:00
Maxim Cournoyer d153caabac
gnu: Add python-bson. 
* gnu/packages/python-xyz.scm (python-bson): New variable.
 2022-05-12 12:45:59 -04:00
Maxim Cournoyer 1f88242992
gnu: python-parse-type: Update to 0.6.0, fixing build. 
* gnu/packages/python-xyz.scm (python-parse-type): Update to 0.6.0.
[arguments]: New field.
[native-inputs]: Remove python-pytest-runner and python-setuptools.
 2022-05-12 12:45:58 -04:00
Maxim Cournoyer 046e5f0d04
gnu: conan: Update to 1.47.0 and relax PyYAML requirement. 
* gnu/packages/package-management.scm (conan): Update to 1.47.0.
[phases]{check}: Skip the test_apt_check test.
{relax-requirements}: Drop upper bound on PyYAML.
 2022-05-12 12:45:58 -04:00
Maxim Cournoyer d95db23cb1
gnu: mbed-tools: Update to 7.53.0 and relax click version requirement. 
* gnu/packages/embedded.scm (mbed-tools): Update to 7.53.0.
[phases]{relax-requirements}: New phase.
 2022-05-12 12:45:58 -04:00
Maxim Cournoyer ef4473051e
gnu: python-readme-renderer: Update to 34.0. 
* gnu/packages/python-xyz.scm (python-readme-renderer): Update to 34.0.
[phases]{check}: Skip GFM tests for now.
 2022-05-12 12:45:58 -04:00
Maxim Cournoyer fa3f7073a9
gnu: python-cmarkgfm: Update to 0.8.0. 
* gnu/packages/markup.scm (python-cmarkgfm): Update to 0.8.0.
 2022-05-12 12:45:57 -04:00
Maxim Cournoyer f2dfeef931
gnu: python-types-dataclasses: Fix typo. 
* gnu/packages/python-xyz.scm (python-types-dataclasses): Fix typo in description.
 2022-05-12 12:45:57 -04:00
Maxim Cournoyer d9bb301460
gnu: xeus: Update to 2.4.1. 
* gnu/packages/jupyter.scm (xeus): Update to 2.4.1.
[source]: Update Git URI.
 2022-05-12 12:45:57 -04:00
Maxim Cournoyer bf17d08256
gnu: python-jupyter-kernel-mgmt: Update to 0.5.1 and disable tests. 
* gnu/packages/jupyter.scm (python-jupyter-kernel-mgmt): Update to 0.5.1.
[arguments]: New field.
[propagated-inputs]: Add python-tornado.
[native-inputs]: Remove python-mock.  Add python-async-generator and
python-pytest-asyncio.
 2022-05-12 12:45:57 -04:00
Maxim Cournoyer 1178fdee3b
gnu: python-jupyter-protocol: Update to 0.2.0. 
* gnu/packages/jupyter.scm (python-jupyter-protocol): Update to 0.2.0.
[propagated-inputs]: Add python-ipython-genutils.
 2022-05-12 12:45:56 -04:00
Maxim Cournoyer 7fc8e9ea90
gnu: python-sparqlkernel: Use gexps and fix inputs. 
[arguments]: Use gexps.
[tests?]: Add comment.
[phases]: Delete trailing #t.
{no-custom-css}: Use a regular lambda.
{install-kernelspec}: Move after the add-installed-pythonpath phase.  Remove
now extraneous add-installed-pythonpath call.  Adjust for gexps.
[native-inputs]: Delete field.
[propagated-inputs]: Add python-ipykernel, python-notebook, python-rdflib and
pythopython-traitlets.
[description]: Avoid '&' in description.
 2022-05-12 12:45:56 -04:00
Maxim Cournoyer 2c30237809
gnu: python-sparqlwrapper: Update to 2.0.0. 
* gnu/packages/rdf.scm (python-sparqlwrapper): Update to 2.0.0.
[source]: Adjust Git URI.
 2022-05-12 12:45:56 -04:00
Maxim Cournoyer 5fcd6aefe9
gnu: python-voila: Update to 0.3.5. 
* gnu/packages/jupyter.scm (python-voila): Update to 0.3.5.
[source]: Use git.
[arguments]: New field.
[propagated-inputs]: Add python-jupyterlab-server, python-traitlets and
python-websockets.
[native-inputs]: Remove python-jupyter-packaging and python-setuptools.  Add
python-numpy and python-pandas.
 2022-05-12 12:45:56 -04:00
Maxim Cournoyer 5f3457ccbb
gnu: python-jupyter-server: Update to 1.16.0. 
* gnu/packages/jupyter.scm (python-jupyter-server): Update to 1.16.0.
[propagated-inputs]: Remove python-ipython-genutils and
python-requests-unixsocket.
 2022-05-12 12:45:56 -04:00
Maxim Cournoyer 34106c85d8
gnu: python-umap-learn: Update to 0.5.3. 
* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.3.
[source]: Use git.
[arguments]: New field.
[native-inputs]: Delete python-joblib and python-nose.  Add python-pytest.
[propagated-inputs]: Add python-pynndescent and python-tqdm.
[synopsis]: Fix indentation.
[description]: Fix typo and re-indent.
 2022-05-12 12:45:55 -04:00
Maxim Cournoyer 06b0512260
gnu: python-pynndescent: Update to 0.5.6. 
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
 2022-05-12 12:45:55 -04:00
Maxim Cournoyer 1d1f44b709
gnu: python-scikit-learn: Parallelize build and test suite. 
* gnu/packages/machine-learning.scm (python-scikit-learn)
[phases]{configure}: New phase.
{build-ext}: Add '-j' option.
{check}: Add '-n' option.
[native-inputs]: Add python-pytest-xdist.
 2022-05-12 12:45:55 -04:00
Maxim Cournoyer c359a4fabb
gnu: python-pandas: Update to 1.4.2. 
* gnu/packages/python-science.scm (python-pandas): Update to 1.4.2.
 2022-05-12 12:45:55 -04:00
Maxim Cournoyer 8b390a8750
gnu: python-pandas: Build and run tests in parallel. 
* gnu/packages/python-science.scm (python-pandas)
[phases]{enable-parallel-build}: New phase.
{check}: Add xdist -n option.  Skip test_memory_usage test.
[native-inputs]: Add python-pytest-xdist.
 2022-05-12 12:45:55 -04:00
Maxim Cournoyer feee911366
gnu: python-numba: Update to 0.55.1. 
* gnu/packages/python-xyz.scm (python-numba): Update to 0.55.1.
 2022-05-12 12:45:55 -04:00
Maxim Cournoyer 152e45ef4d
gnu: python-llvmlite: Update to 0.38.0. 
* gnu/packages/llvm.scm (python-llvmlite): Update to 0.38.0.
 2022-05-12 12:45:54 -04:00
Maxim Cournoyer 411cd4345f
gnu: python-numpy: Update to 1.21.6 and parallelize build/tests. 
* gnu/packages/python-xyz.scm (python-numpy): Update to 1.21.6.  Move inputs
and native-inputs fields after arguments.  Use gexps.
[modules]: New argument.
[phases]{parallelize-build}: New phase.
{configure-blas}: Format via (ice-9 format).
{fix-executable-paths}: Use search-file-input.  Remove obsolete system_info.py
substitution.
{check}: Remove extraneous add-installed-pythonpath and setenv calls.  Provide
the '-n' pytest-xdist option.
[native-inputs]: Use python-hypothesis-next.
(python-numpy-next): Inherit from python-numpy.
(python2-numpy): Adjust for gexps.
[phases]{delete-failing-test}: Rename to...
{delete-failing-tests}: ... this.
(python2-numpy-1.8): Likewise, and delete 'delete-failing-tests' phase.
Disable tests.
[native-inputs]: Define as the empty list.
 2022-05-12 12:45:54 -04:00
Maxim Cournoyer bfe7f40650
gnu: python-hypothesis-6.23: Update to 6.43.3. 
* gnu/packages/check.scm (python-hypothesis-6.23): Update to 6.43.3 and rename
to...
(python-hypothesis-next): ... this.
[propagated-inputs]: Add python-pytest.
* gnu/packages/matrix.scm (python-matrix-nio): Adjust accordingly.
* gnu/packages/python-web.scm (python-h2): Likewise.
* gnu/packages/check.scm (python-hypothesis)[home-page]: Update URL.
 2022-05-12 12:45:54 -04:00
Maxim Cournoyer 1a564cf147
gnu: Add python-jupyterlab-server. 
* gnu/packages/jupyter.scm (python-jupyterlab-server): New variable.
 2022-05-12 12:45:54 -04:00
Maxim Cournoyer 3f9eafbedd
gnu: Add python-openapi-core. 
* gnu/packages/python-web.scm (python-openapi-core): New variable.
 2022-05-12 12:45:53 -04:00
Maxim Cournoyer ea754c74d3
gnu: Add python-dictpath. 
* gnu/packages/python-xyz.scm (python-dictpath): New variable.
 2022-05-12 12:45:53 -04:00
Maxim Cournoyer e5d3408022
gnu: python-falcon: Update to 3.1.0. 
* gnu/packages/python-web.scm (python-falcon): Update to 3.1.0.
[source]: Use git.  Adjust snippet.
[phases]{check}: Set HOME and invoke pytests with "-vv".
[native-inputs]: Add python-aiofiles, python-cbor2, python-fakeredis,
python-httpx, python-pecan, python-pillow, python-pytest-asyncio and
python-websockets.
[synopsis, description]: Fix indentation.
 2022-05-12 12:45:53 -04:00
Maxim Cournoyer a64ea1f2d3
gnu: python-fakeredis: Update to 1.7.1. 
* gnu/packages/databases.scm (python-fakeredis): Update to 1.7.1.
[propagated-inputs]: Add python-aioredis.
 2022-05-12 12:45:53 -04:00
Maxim Cournoyer eba0784937
gnu: Add python-aioredis. 
* gnu/packages/databases.scm (python-aioredis): New variable.
 2022-05-12 12:45:53 -04:00
Maxim Cournoyer 0d58503970
gnu: Add python-pecan. 
* gnu/packages/python-web.scm (python-pecan): New variable.
 2022-05-12 12:45:52 -04:00
Maxim Cournoyer df95872d10
gnu: python-sqlalchemy: Update to 1.4.35. 
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.4.35.
 2022-05-12 12:45:52 -04:00
Maxim Cournoyer 72d292eac0
gnu: python-sqlalchemy: Run tests in parallel via xdist. 
* gnu/packages/databases.scm (python-sqlalchemy)[phases]: Use gexps.
{check}: Run tests in parallel; skip slow test_memusage.
* gnu/packages/databases.scm (python2-sqlalchemy): Adjust to avoid xdist.
 2022-05-12 12:45:52 -04:00
Maxim Cournoyer 1f5f4cc1a2
gnu: Add python-socksio. 
* gnu/packages/python-web.scm (python-socksio): New variable.
 2022-05-12 12:45:52 -04:00