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Author SHA1 Message Date
David Craven de459dc095
gnu: Add linux-libre-beagle-bone-black. 
* gnu/packages/linux.scm (linux-libre-beagle-bone-black): New variable.
 2016-09-13 21:01:27 +02:00
David Craven cde7c23f15
gnu: Add linux-libre-arm-generic. 
* gnu/packages/linux.scm (linux-libre-arm-generic): New variable.
 2016-09-13 21:01:27 +02:00
David Craven 78edccccaf
gnu: linux-libre: Use kmod. 
* gnu/packages/linux.scm (make-linux-libre): Use kmod.
 2016-09-13 21:01:27 +02:00
David Craven 3129b9c2b1
gnu: make-linux-libre: Add supported-systems parameter. 
* gnu/packages/linux.scm (make-linux-libre): Add supported-systems
  parameter.
 2016-09-13 21:01:27 +02:00
David Craven fd6e0de3c0
gnu: make-linux-libre: Add zImage to output. 
* gnu/packages/linux.scm (make-linux-libre): Add zImage to output.
 2016-09-13 21:01:27 +02:00
David Craven a6d0132514
gnu: make-linux-libre: Add extra-version parameter. 
* gnu/packages/linux.scm (make-linux-libre): Add extra-version option.
 2016-09-13 21:01:27 +02:00
David Craven 90c18c321e
gnu: make-linux-libre: Add extra-options parameter. 
* gnu/packages/linux.scm (linux-libre): Use
  %default-extra-linux-options.
  (config->string, %default-extra-linux-options): New variables.
 2016-09-13 21:01:27 +02:00
David Craven c258807a85
gnu: Use make-linux-libre. 
* gnu/packages/linux.scm (make-linux-libre): New variable.
  (linux-libre, linux-libre-4.4, linux-libre-4.1): Use make-linux-libre.
  (kernel-config): Take arch instead of system.
 2016-09-13 21:01:27 +02:00
ng0 0a1d8596fd
gnu: lispf4: Remove unused inputs key. 
* gnu/packages/lisp.scm (lispf4)[arguments]: Remove unused
inputs key from 'install' phase.
[source](file-name): Append "-checkout" to the file-name.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 15:00:02 -04:00
David Craven 8feb56b0d4
gnu: u-boot-vexpress_ca9x4: Rename to u-boot-vexpress. 
* gnu/packages/u-boot.scm (u-boot-vexpress_ca9x4): Rename.
 2016-09-13 19:04:43 +02:00
David Craven 20f9c6764c
gnu: Add u-boot-beagle-bone-black. 
* gnu/packages/u-boot.scm (u-boot-beagle-bone-black): New variable.
 2016-09-13 19:04:43 +02:00
Danny Milosavljevic e42a0771b7
gnu: dtc: Remove patch-paths phase. 
* gnu/packages/u-boot.scm (dtc)[arguments]: Remove patch-paths phase.
  [configure-flags]: Add INSTALL.

Signed-off-by: David Craven <david@craven.ch>
 2016-09-13 19:04:43 +02:00
Danny Milosavljevic 243db8245e
gnu: Add python-lit, python2-lit. 
* gnu/packages/python.scm (python-lit, python2-lit): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 12:41:44 -04:00
Tobias Geerinckx-Rice d15e2ef05a
gnu: python-prompt-toolkit: Update to 1.0.7. 
* gnu/packages/python.scm (python-prompt-toolkit): Update to 1.0.7.
[source]: Use 'pypi-uri'.
 2016-09-13 17:03:42 +02:00
Tobias Geerinckx-Rice c033c1958d
gnu: ruby: Remove string-append call with single argument. 
* gnu/packages/ruby.scm (ruby)[source]: Remove string-append.
 2016-09-13 16:48:44 +02:00
Tobias Geerinckx-Rice 05077200f7
gnu: tinyxml: Fix typo in description. 
* gnu/packages/xml.scm (tinyxml)[description]: Fix typo.
 2016-09-13 16:48:44 +02:00
Tobias Geerinckx-Rice d21047d504
services: nginx: Actually check if configuration is valid. 
* gnu/services/web.scm (nginx-activation): Fix path to nginx binary.
 2016-09-13 16:48:44 +02:00
David Craven 4b42703ed5
gnu: linux-libre: Add support for cross-compilation. 
* gnu/packages/linux.scm (linux-libre): Add support for
  cross-compilation.
 2016-09-13 16:45:41 +02:00
David Craven 9416459b72
gnu: linux-libre: Move kernel configuration to configure phase. 
* gnu/packages/linux.scm (linux-libre)[arguments]: Add configure phase.
 2016-09-13 16:45:41 +02:00
David Craven 499fb7e0ba
gnu: linux-libre: Apply %boot-logo patch in origin. 
* gnu/packages/linux.scm (linux-libre)[origin]: Apply %boot-logo patch
  in origin.
 2016-09-13 16:45:41 +02:00
David Craven 6d7ef2aad2
gnu: linux-libre: Use system->architecture. 
* gnu/packages/linux.scm (linux-libre): Use system->architecture.
 2016-09-13 16:45:41 +02:00
David Craven 614d1738e2
gnu: linux-libre: Use modify-phases. 
* gnu/packages/linux.scm (linux-libre): Use modify-phases.
 2016-09-13 16:45:41 +02:00
David Craven 885009c5b9
gnu: module-init-tools: Prevent line wrapping. 
* gnu/packages/linux.scm (module-init-tools): Break line.
 2016-09-13 16:45:41 +02:00
Kei Kebreau 89bcf3fcc9
gnu: Add schismtracker. 
* gnu/packages/music.scm (schismtracker): New variable.
 2016-09-13 10:31:40 -04:00
Alex ter Weele 23de5cbd14
gnu: guile-wm: Add '.desktop' file. 
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Add
'install-xsession' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 14:01:27 +02:00
Ben J Woodcroft 66daf78c0a
gnu: Add seqtk. 
* gnu/packages/bioinformatics.scm (seqtk): New variable.
 2016-09-13 20:27:29 +10:00
Andy Patterson 6c0cd765c0
gnu: libbluray: Enable libaacs and libbdplus support. 
* gnu/packages/video.scm (libbluray) [inputs]: Add libaacs and
libbdplus.
[arguments]: Add 'fix-dlopen-paths' to #:phases.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 10:26:35 +02:00
Andy Patterson 8dd6fc5164
gnu: Add libaacs. 
* gnu/packages/video.scm (libaacs): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 10:26:35 +02:00
Andy Patterson 4df0762248
gnu: Add libbdplus. 
* gnu/packages/video.scm (libbdplus): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 10:26:35 +02:00
Marius Bakke 4fba38db9c
gnu: dlib: Disable failing tests. 
* gnu/packages/machine-learning.scm (dlib)[arguments]: Add phase
'disable-failing-tests' for tests that are known not to work in the current
release.
[inputs]: Add lapack.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 01:12:42 -04:00
Marius Bakke 8eaf53e366
gnu: dlib: Do not build dlib twice for tests. 
* gnu/packages/machine-learning.scm (dlib)[arguments]: Use makefile
instead of cmake in check phase to prevent full rebuild.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 01:12:42 -04:00
Marius Bakke f40841e999
gnu: dlib: Remove unused fftw from inputs. 
* gnu/packages/machine-learning.scm (dlib)[inputs]: Remove fftw.
(define-module): Don't include algebra.scm.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 01:12:42 -04:00
Ivan Vilata-i-Balaguer d2262d7052
gnu: python-py3status: Update to 3.1. 
* gnu/packages/python.scm (python-py3status): Update to 3.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-12 16:48:44 -04:00
Efraim Flashner 4f6ec7e800
gnu: youtube-dl: Update to 2016.09.11.1. 
* gnu/packages/video.scm (youtube-dl): Update to 2016.09.11.1.
 2016-09-12 22:34:24 +03:00
Efraim Flashner f34365b53e
gnu: mpv: Remove extra input. 
* gnu/packages/video.scm (mpv)[inputs]: Remove vapoursynth.
 2016-09-12 22:31:15 +03:00
Efraim Flashner 9a078f4863
gnu: vapoursynth: Remove mips support. 
* gnu/packages/video.scm (vapoursynth)[supported-systems]: New field,
remove support for mips64el which is unsupported.
 2016-09-12 22:29:35 +03:00
Efraim Flashner f51940b0f5
gnu: vim: Make builds bit-reproducable. 
* gnu/packages/vim.scm (vim)[arguments]: Remove the compiled date.
 2016-09-12 21:54:05 +03:00
Efraim Flashner db3cc007e3
gnu: vim: Update to 8.0. 
* gnu/packages/vim.scm (vim): Update to 8.0.
[arguments]: Update files which need /bin/sh patched.
 2016-09-12 21:54:04 +03:00
Leo Famulari 2642231b39
gnu: bowtie: Update to 2.2.9. 
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.2.9.
 2016-09-12 14:19:37 -04:00
Leo Famulari d8a1be6328
gnu: certbot: Improve synopsis. 
* gnu/packages/tls.scm (certbot)[synopsis]: Add authorship information.
 2016-09-12 13:05:42 -04:00
Leo Famulari 0581c273a4
gnu: Add acme-client. 
* gnu/packages/tls.scm (acme-client): New variable.
 2016-09-12 13:05:42 -04:00
Leo Famulari 974e2b2971
gnu: gnutls: Replace with 3.5.4 [fixes GNUTLS-SA-2016-3]. 
* gnu/packages/tls.scm (gnutls)[replacement]: New field.
(gnutls-3.5.4): New variable.
 2016-09-12 12:30:33 -04:00
John Darrington e9aba1ea33
gnu: Add nfs-utils 
* gnu/packages/nfs.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-09-12 18:17:57 +02:00
Ricardo Wurmus d108c21228
gnu: r-org-mm-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.3.0.
 2016-09-12 17:44:49 +02:00
Ricardo Wurmus 6ab7ca24f2
gnu: r-org-dm-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 019be09060
gnu: r-org-ce-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 5cc7cff6ef
gnu: r-org-hs-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 401528b2b5
gnu: r-go-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 87a7c55ebd
gnu: r-rmarkdown: Update to 1.0. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.0.
[propagated-inputs]: Add "r-jsonlite" and "r-base64enc".
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus de1eebd7d7
gnu: r-dplyr: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.5.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 5e67507273
gnu: r-rcpparmadillo: Update to 0.7.400.2.0. 
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.400.2.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.400.2.0.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus 1b7f85f52d
gnu: r-tidyr: Update to 0.6.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.0.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus c3253ce1b5
gnu: r-irlba: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.1.1.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus f791b689b2
gnu: r-dt: Update to 0.2. 
* gnu/packages/statistics.scm (r-dt): Update to 0.2.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus 7931531a23
gnu: r-sparsem: Update to 1.72. 
* gnu/packages/statistics.scm (r-sparsem): Update to 1.72.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus b9ab3b08b8
gnu: r-lambda-r: Update to 1.1.9. 
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.1.9.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus 27f10d3db2
gnu: r-futile-logger: Update to 1.4.3. 
* gnu/packages/statistics.scm (r-futile-logger): Update to 1.4.3.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus fce4dfd82e
gnu: r-lattice: Update to 0.20-34. 
* gnu/packages/statistics.scm (r-lattice): Update to 0.20-34.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus bdfc2c954e
gnu: r-plotrix: Update to 3.6-3. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-3.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus 8c6e2b843e
gnu: r-readr: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-readr): Update to 1.0.0.
[propagated-inputs]: Add "r-hms", "r-tibble", and "r-r6".
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus b90314b4f8
gnu: Add r-hms. 
* gnu/packages/statistics.scm (r-hms): New variable.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus a589acfb08
gnu: Add r-tibble. 
* gnu/packages/statistics.scm (r-tibble): New variable.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus 348bb8d663
gnu: r-withr: Update to 1.0.2. 
* gnu/packages/statistics.scm (r-withr): Update to 1.0.2.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 3bb9708a7f
gnu: r-devtools: Update to 1.12.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.12.0.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus e2cfac445e
gnu: r-rstudioapi: Update to 0.6. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.6.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus e58498b6ee
gnu: r-httr: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-httr): Update to 1.2.1.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 130c3c8b93
gnu: r-openssl: Update to 0.9.4. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.4.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 81147fe886
gnu: r-rversions: Update to 1.0.3. 
* gnu/packages/statistics.scm (r-rversions): Update to 1.0.3.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 03306201a7
gnu: r-multitaper: Update to 1.0-12. 
* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-12.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus e2ad0228fc
gnu: r-xml2: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.0.0.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus ef82bd5888
gnu: r-r6: Update to 2.1.3. 
* gnu/packages/statistics.scm (r-r6): Update to 2.1.3.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus 344d5323d6
gnu: r-crayon: Update to 1.3.2. 
* gnu/packages/statistics.scm (r-crayon): Update to 1.3.2.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus ad28491e12
gnu: r-knitr: Update to 1.14. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.14.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus 2d037a2d68
gnu: r-mime: Update to 0.5. 
* gnu/packages/statistics.scm (r-mime): Update to 0.5.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus 5b67bd6e8f
gnu: r-dbi: Update to 0.5-1. 
* gnu/packages/statistics.scm (r-dbi): Update to 0.5-1.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 6d6a917a16
gnu: r-lazyeval: Update to 0.2.0. 
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.0.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus bf1e9e4517
gnu: r-stringr: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-stringr): Update to 1.1.0.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 1f94ede8ea
gnu: r-stringi: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.1.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus deb265a7b3
gnu: r-plyr: Update to 1.8.4. 
* gnu/packages/statistics.scm (r-plyr): Update to 1.8.4.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 8b2f96e73a
gnu: r-permute: Update to 0.9-4. 
* gnu/packages/statistics.scm (r-permute): Update to 0.9-4.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 21f45c9d9e
gnu: r-mgcv: Update to 1.8-14. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-14.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus cb27d6ba4e
gnu: r-rcpp: Update to 0.12.7. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.7.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 5aaa12dfb5
gnu: r-digest: Update to 0.6.10. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.10.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 44f711dbe6
gnu: r-biocparallel: Update to 1.6.6. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.6.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 10e479a7c0
gnu: r-genomicranges: Update to 1.24.3. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.3.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 01ebbb1b76
gnu: r-limma: Update to 3.28.21. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.21.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus bbf53cb527
gnu: r-variantannotation: Update to 1.18.7. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.7.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 4fa7091d54
gnu: r-genomeinfodb: Update to 1.8.7. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.7.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 3b851cd4ac
gnu: r-seqinr: Update to 3.3-1. 
* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-1.
[propagated-inputs]: Add "r-segmented".
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 3e4c0c6662
gnu: Add r-segmented. 
* gnu/packages/statistics.scm (r-segmented): New variable.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 2b1cc79d98
gnu: r-s4vectors: Update to 0.10.3. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.10.3.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 0b54b4c986
gnu: r-acsnminer: Update to 0.16.8.25. 
* gnu/packages/bioinformatics.scm (r-acsnminer): Update to 0.16.8.25.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 2c575bb9a2
gnu: r-vegan: Update to 2.4-1. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-1.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus 02a87536bf
gnu: r-curl: Update to 1.2. 
* gnu/packages/web.scm (r-curl): Update to 1.2.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus cc1446acc7
gnu: r-htmlwidgets: Update to 0.7. 
* gnu/packages/web.scm (r-htmlwidgets): Update to 0.7.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus 4df0cb8d05
gnu: r-jsonlite: Update to 1.0. 
* gnu/packages/web.scm (r-jsonlite): Update to 1.0.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus ccd9b1511e
gnu: r-pracma: Update to 1.9.5. 
* gnu/packages/maths.scm (r-pracma): Update to 1.9.5.
[propagated-inputs]: Add "r-quadprog".
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus 2d047896f9
gnu: Add r-quadprog. 
* gnu/packages/maths.scm (r-quadprog): New variable.
 2016-09-12 17:44:40 +02:00
John Darrington 39fb629535
gnu: (cfitsio, wcslib): Change return values of custom phases. 
* gnu/packages/astronomy.scm (cfitsio, wcslib): Return #t from patch phases.
 2016-09-12 17:35:03 +02:00
Andreas Enge 378920defc
gnu: python-django: Add patch file. 
* gnu/packages/patches/python-django-fix-testcase.patch: New file.

This is a follow-up to commit d18197af78.
 2016-09-12 17:27:33 +02:00