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Author SHA1 Message Date
Nicolas Goaziou 0306d83bed
gnu: emacs-apheleia: Update to 4.0. 
* gnu/packages/emacs-xyz.scm (emacs-apheleia): Update to 4.0.

Change-Id: I2d61a20e434400f8dbae7d33894ab6f6134c9630
 2024-01-02 00:43:02 +01:00
Nicolas Goaziou 30a7f0212a
gnu: emacs-vertico-posframe: Update to 0.7.5. 
* gnu/packages/emacs-xyz.scm (emacs-vertico-posframe): Update to 0.7.5.

Change-Id: Ifff04b43f978e0664cafca2ab8b8e5a8b826bca4
 2024-01-02 00:43:02 +01:00
Nicolas Goaziou 9e195fa0ed
gnu: emacs-ebdb: Update to 0.8.20. 
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.20.

Change-Id: Ib3420c220beadc022bf3e65c8d904a0237f9dd18
 2024-01-02 00:43:01 +01:00
Nicolas Goaziou 08c08b22b2
gnu: emacs-tramp: Update to 2.6.2.0. 
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.6.2.0.

Change-Id: Id3db704243d269b1b0979a4ed2fe36bd42f8e9bb
 2024-01-02 00:43:01 +01:00
Nicolas Goaziou 4dc30915cc
gnu: emacs-kind-icon: Update to 0.2.1. 
* gnu/packages/emacs-xyz.scm (emacs-kind-icon): Update to 0.2.1.

Change-Id: Id0fe5f72a3252cf3bf7348cd45db89da9e80b6ec
 2024-01-02 00:43:01 +01:00
Nicolas Goaziou cab4cf27dc
gnu: emacs-eldoc: Update to 1.15.0. 
* gnu/packages/emacs-xyz.scm (emacs-eldoc): Update to 1.15.0.

Change-Id: Icea7f7d60301892e9476b930ab19a85f41b29f4f
 2024-01-02 00:43:01 +01:00
Nicolas Goaziou 6ca99feaf5
gnu: emacs-subed: Update to 1.2.11. 
* gnu/packages/emacs-xyz.scm (emacs-subed): Update to 1.2.11.

Change-Id: Ib3838ec91afdeefef267df49394ee4b1f75fa63a
 2024-01-02 00:43:00 +01:00
Nicolas Goaziou 2bfcb104b7
gnu: emacs-auctex: Update to 13.2.3. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.2.3.

Change-Id: Iabeb142f7fe1f5fcf925f788263c76eb0bbf1382
 2024-01-02 00:43:00 +01:00
Nicolas Goaziou 8f8fbb79ba
gnu: emacs-rec-mode: Update to 1.9.3. 
* gnu/packages/databases.scm (emacs-rec-mode): Update to 1.9.3.

Change-Id: I4268c08171b75442a6ba5b5da2887ae9764df98d
 2024-01-02 00:42:55 +01:00
Ricardo Wurmus ee0cf3b9ff
gnu: r-seurat-utils: Update to 2.5.0-1.c0374cc. 
* gnu/packages/bioinformatics.scm (r-seurat-utils): Update to 2.5.0-1.c0374cc.
[propagated-inputs]: Add r-databaselinke-r, r-enhancedvolcano, r-foreach,
r-job, r-magrittr, r-pheatmap, r-plotly, r-qs, r-rstudioapi, and r-tidyverse.

Change-Id: Iea2df8205357e7717c0adec00f6852794817d295
 2024-01-01 19:22:11 +01:00
Ricardo Wurmus 679560ffca
gnu: Add r-databaselinke-r. 
* gnu/packages/bioinformatics.scm (r-databaselinke-r): New variable.

Change-Id: I0cfcb5b6810b7afebbb9ccb02aafcce05507536c
 2024-01-01 19:21:59 +01:00
Ricardo Wurmus 510c2206e4
gnu: Add r-job. 
* gnu/packages/cran.scm (r-job): New variable.

Change-Id: I37a0870bd22d5bc2e700f843fca49f242a197440
 2024-01-01 19:21:37 +01:00
Ricardo Wurmus ff586211aa
gnu: Remove r-rmetasim. 
This package fails to build and has been archived on CRAN in 2021.

* gnu/packages/cran.scm (r-rmetasim): Remove variable.

Change-Id: I46a6c98d7e05faac6f83e29dfb21196a69bae56b
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus 00e6f55ddb
gnu: r-batchelor: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.18.1.

Change-Id: Ic541acacc7e02951f0b2cc6d08d257fe22d7d4b4
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus c8d1f64f40
gnu: r-genomeinfodb: Update to 1.38.5. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.5.

Change-Id: I000bf46cc66ed4a6f1e44b12989326c121acde4c
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus b0580a05be
gnu: r-seuratdisk: Update to 0.0.0.9021-1.877d4e1. 
* gnu/packages/cran.scm (r-seuratdisk): Update to 0.0.0.9021-1.877d4e1.

Change-Id: Iab1426efe5b792aacf19ab15e9d6d95be0bac38b
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus 2510849ec9
gnu: r-sparsearray: Update to 1.2.3. 
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.3.

Change-Id: I5907db78a1261a3dbe0390737cc357bafbdb331e
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus 31e882e4b1
gnu: r-genomicscores: Update to 2.14.3. 
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.3.

Change-Id: I973721a2ba3a5c5d7e23c4063f363fea7bdfe77e
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus e15b95c126
gnu: r-metapod: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-metapod): Update to 1.10.1.

Change-Id: Iafd5b48420d12f9fd02966c83914feb1ef38e510
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus 5673484cbc
gnu: r-biocneighbors: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.20.1.

Change-Id: I34aa795404d8c083585f83d5a02810a9005bef32
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus a72c6ba19a
gnu: r-genomeinfodb: Update to 1.38.4. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.4.

Change-Id: Icdd7237e7a4d15a6b9554fca77423148d6f7438e
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus 25d7dbd61c
gnu: Add r-inext. 
* gnu/packages/cran.scm (r-inext): New variable.

Change-Id: I6a87cfb57bfc8000520b98999cf260d2873f0b61
 2024-01-01 14:35:16 +01:00
Ricardo Wurmus 513994aead
import/cran: Restore format-inputs. 
This fixes a regression introduced in commit
e6223017d9 causing the selected input style to
be ignored.

* guix/import/cran.scm (format-inputs): New procedure.
(maybe-inputs): Use it.

Change-Id: I0d36f972fcb9888ed2be4ec9360bbcab13c25c5d
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus a2a8c4c13a
gnu: r-fpc: Update to 2.2-11. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-11.

Change-Id: Iebf343be3f9ce37fc9d740286b185e9c5c733efb
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 79fe5cbad0
gnu: r-cowplot: Update to 1.1.2. 
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.2.

Change-Id: Ie1688b1eb38e2c3ef04460cc4dd7c35179b6c48e
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus df69fcac77
gnu: r-vipor: Update to 0.4.7. 
* gnu/packages/statistics.scm (r-vipor): Update to 0.4.7.

Change-Id: I7a7442ae64d5a96a4ab20427ab5fb8bcdc2e51e2
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 8047e5328b
gnu: r-matrixstats: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 1.2.0.

Change-Id: I08ad75b3cdfefdeb9718086be75bb24153e117c9
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 2b2ad78597
gnu: r-segmented: Update to 2.0-1. 
* gnu/packages/statistics.scm (r-segmented): Update to 2.0-1.

Change-Id: Ieb6dac2712af46fffd29959d9510153dd1f1fb5d
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus cd1ea61bc0
gnu: r-brew: Update to 1.0-10. 
* gnu/packages/statistics.scm (r-brew): Update to 1.0-10.

Change-Id: I8d3045477d8b329f0c626738a0cd8cf02862e34c
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 373c9b4efc
gnu: r-yaml: Update to 2.3.8. 
* gnu/packages/statistics.scm (r-yaml): Update to 2.3.8.

Change-Id: I0b654db60d894e160c1ad8aa77000fc90ea649c3
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus da28470890
gnu: r-dbi: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-dbi): Update to 1.2.0.

Change-Id: I4384d37dd602b396fce736ff5c3b33e3da965233
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 7f7c2a4805
gnu: r-stringi: Update to 1.8.3. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.8.3.

Change-Id: Id600b65a926a233400870444ad3028690be3e92e
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 5106fc899a
gnu: r-mgcv: Update to 1.9-1. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.9-1.

Change-Id: I9275750902b6e2d2bd1c7394363bdbc66043c4de
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus b9e33a7fd4
gnu: r-ggh4x: Update to 0.2.7. 
* gnu/packages/cran.scm (r-ggh4x): Update to 0.2.7.

Change-Id: I0211d69404806922d6725f4936593573674d7e59
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus ba23ca977e
gnu: r-ragg: Update to 1.2.7. 
* gnu/packages/cran.scm (r-ragg): Update to 1.2.7.

Change-Id: I95f8c91f678181066745cad09295c4bcf24993de
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 6b86c1f3db
gnu: r-mlr3learners: Update to 0.5.8. 
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.5.8.

Change-Id: Icae31b1458044eb224a19f06b46a45906a9c0f6d
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 42c76e2f49
gnu: r-mlr3: Update to 0.17.1. 
* gnu/packages/cran.scm (r-mlr3): Update to 0.17.1.
[propagated-inputs]: Add r-rhpcblasctl.

Change-Id: Ida585a8ac45d8f78de787a243808788927ab765a
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus c5df00c1d1
gnu: r-projpred: Update to 2.8.0. 
* gnu/packages/cran.scm (r-projpred): Update to 2.8.0.

Change-Id: I01cfa407b53ccb02eea729319454f1f1f409d1d3
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus ae27de6649
gnu: r-rcdd: Update to 1.6. 
* gnu/packages/cran.scm (r-rcdd): Update to 1.6.

Change-Id: I6b76442004bb2fe3a6bb66c296562df295da2378
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 4b70228358
gnu: r-rsconnect: Update to 1.2.0. 
* gnu/packages/cran.scm (r-rsconnect): Update to 1.2.0.

Change-Id: I8611d8a82b040f33292cdd81b5a278bdf500e956
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 9fb3c0057b
gnu: r-gghighlight: Update to 0.4.1. 
* gnu/packages/cran.scm (r-gghighlight): Update to 0.4.1.

Change-Id: Ic4067391a7713b59081f8a688704175e5bb024aa
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus b7e2c6b1c8
gnu: r-tidygraph: Update to 1.3.0. 
* gnu/packages/cran.scm (r-tidygraph): Update to 1.3.0.
[propagated-inputs]: Add r-lifecycle.

Change-Id: I99834ca5ee3ca760d2d5f16245118cd56c5e2b75
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 8b5768d509
gnu: r-terra: Update to 1.7-65. 
* gnu/packages/cran.scm (r-terra): Update to 1.7-65.

Change-Id: I4fbb281b56600d51e59c863e5cfba00005db91de
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus ea6b9e91ff
gnu: r-yulab-utils: Update to 0.1.2. 
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.2.

Change-Id: If6c7afd545aae041a8f9a541845ae12b2285314e
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus 5709ad0046
gnu: r-haplo-stats: Update to 1.9.5. 
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.9.5.

Change-Id: Ic7e9c54242a0112de0b110e1b2c3c30288dd135a
 2024-01-01 14:35:15 +01:00
Ricardo Wurmus eb50f38a6d
gnu: r-pegas: Update to 1.3. 
* gnu/packages/cran.scm (r-pegas): Update to 1.3.

Change-Id: If0c384c10f6203eaa8c4c15c17856a89351b6830
 2024-01-01 14:35:14 +01:00
Ricardo Wurmus c774b097a8
gnu: r-sf: Update to 1.0-15. 
* gnu/packages/cran.scm (r-sf): Update to 1.0-15.

Change-Id: I56c17f3d492664e080e5936a6bffad1f219d6231
 2024-01-01 14:35:14 +01:00
Ricardo Wurmus 8d01590dc2
gnu: r-s2: Update to 1.1.6. 
* gnu/packages/cran.scm (r-s2): Update to 1.1.6.

Change-Id: Ia4fec706e071401d0b2999bf94e1871898224bf4
 2024-01-01 14:35:14 +01:00
Ricardo Wurmus 4cad958bb3
gnu: r-lavaan: Update to 0.6-17. 
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-17.

Change-Id: I1b02e94154badf23becd6c95cca13ca8188f3168
 2024-01-01 14:35:14 +01:00
Ricardo Wurmus 6c2c12de93
gnu: r-tensora: Update to 0.36.2.1. 
* gnu/packages/cran.scm (r-tensora): Update to 0.36.2.1.

Change-Id: I9d8ae1b94fd43ceb68044b944335d341b84bed70
 2024-01-01 14:35:14 +01:00