TakeV/guix
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
57179 commits 103 branches 35 tags 496 MiB
Commit graph

57179 commits

This branch
This branch
All branches
Author SHA1 Message Date
Amar Singh
be78906592
gnu: Add guile-torrent. 
* gnu/packages/guile-xyz.scm (guile-torrent): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2020-03-12 15:52:41 +01:00
Efraim Flashner
0c08e4bfa1
gnu: edirect: Update to 13.3.20200128. 
* gnu/packages/bioinformatics.scm (edirect): Update to 13.3.20200128.
[source]: Remove bundled certificate authority tarball.
 2020-03-12 16:50:23 +02:00
Ricardo Wurmus
72e76113f7
gnu: r-car: Update to 3.0-7. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-7.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:04 +01:00
Ricardo Wurmus
92d6c94a16
gnu: r-nloptr: Update to 1.2.2.1. 
* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.2.1.
 2020-03-12 15:15:04 +01:00
Ricardo Wurmus
66f1fead63
gnu: r-roxygen2: Update to 7.1.0. 
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.1.0.
[native-inputs]: Move r-knitr from here...
[propagated-inputs]: ...to here.
 2020-03-12 15:15:04 +01:00
Ricardo Wurmus
09583a0f79
gnu: r-xml2: Update to 1.2.5. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.5.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:04 +01:00
Ricardo Wurmus
defbaab3f8
gnu: r-tam: Update to 3.4-26. 
* gnu/packages/cran.scm (r-tam): Update to 3.4-26.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
4dab179de2
gnu: r-cdm: Update to 7.5-15. 
* gnu/packages/cran.scm (r-cdm): Update to 7.5-15.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
ca29e40dac
gnu: r-parameters: Update to 0.6.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.6.0.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
40ac3dc394
gnu: r-graphlayouts: Update to 0.6.0. 
* gnu/packages/cran.scm (r-graphlayouts): Update to 0.6.0.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
9d3d3d1bd5
gnu: r-ggfortify: Update to 0.4.9. 
* gnu/packages/cran.scm (r-ggfortify): Update to  0.4.9.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
0cc0e7e370
gnu: r-ggplotify: Update to 0.0.5. 
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.5.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
f718c28cc6
gnu: r-pegas: Update to 0.13. 
* gnu/packages/cran.scm (r-pegas): Update to 0.13.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
a85aef2d75
gnu: r-spatialextremes: Update to 2.0-8. 
* gnu/packages/cran.scm (r-spatialextremes): Update to 2.0-8.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
dca5a8143f
gnu: r-tidytree: Update to 0.3.2. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.2.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
d520e4c942
gnu: r-rcppparallel: Update to 5.0.0. 
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.0.0.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
69a3c4ce51
gnu: r-sjplot: Update to 2.8.3. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.3.
[propagated-inputs]: Remove r-forcats.
[native-inputs]: Remove r-knitr.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
cd26e5dee8
gnu: r-catdap: Update to 1.3.5. 
* gnu/packages/cran.scm (r-catdap): Update to 1.3.5.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
f7306e465e
gnu: r-vim: Update to 5.1.1. 
* gnu/packages/cran.scm (r-vim): Update to 5.1.1.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
117270fb51
gnu: r-vctrs: Update to 0.2.4. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.4.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:03 +01:00
Ricardo Wurmus
6bd6097ed5
gnu: r-cicero: Update to 1.4.4. 
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.4.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:02 +01:00
Ricardo Wurmus
0754fefb75
gnu: r-ggcyto: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.14.1.
[native-inputs]: Add r-knitr.
 2020-03-12 15:15:02 +01:00
Ricardo Wurmus
e0061f5125
gnu: r-mlinterfaces: Update to 1.66.5. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.5.
 2020-03-12 15:15:02 +01:00
Ricardo Wurmus
0b692ef2c6
gnu: r-qtl: Update to 1.46-2. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.46-2.
 2020-03-12 15:15:02 +01:00
Pierre Neidhardt
04ff192ec4
gnu: Add hyperledger-iroha. 
This package was co-authored with Efraim Flashner <efraim@flashner.co.il>

* gnu/packages/hyperledger.scm (hyperledger-iroha): New variable.
 2020-03-12 15:34:28 +02:00
Efraim Flashner
f204d155e3
gnu: Add boost-1.69. 
* gnu/packages/boost.scm (boost-1.69): New hidden package.
 2020-03-12 15:34:28 +02:00
Pierre Neidhardt
37109658a5
gnu: Add hyperledger-iroha-ed25519. 
* gnu/packages/hyperledger.scm (hyperledger-iroha-ed25519): New variable.
 2020-03-12 15:34:28 +02:00
Efraim Flashner
d56d3ae704
gnu: grpc: Build shared libraries. 
* gnu/packages/machine-learning.scm (grpc)[outputs]: Add static.
[arguments]: Copy configure-flags from cmake-build-system. Add custom
phases 'configure-shared, 'install-shared-libraries and 'move-static-libs
to build shared libs and move static libs to their own output.
(tensorflow)[native-inputs]: Add grpc:static.
 2020-03-12 15:34:28 +02:00
Efraim Flashner
b0aa58d8f1
gnu: python2-jupyter-console: Build with python2. 
* gnu/packages/python-xyz.scm (python2-jupyter-console)[arguments]: Add
python keyword, set to python-2.
 2020-03-12 15:34:28 +02:00
Efraim Flashner
e8588a7847
gnu: python-jupyter-console: Specify python2 variant. 
* gnu/packages/python-xyz.scm (python-jupyter-console)[properties]: New
field. Specify python2-jupyter-console as python2 variant.
 2020-03-12 15:34:27 +02:00
Ricardo Wurmus
a595399230
services: mumi-service-type: Update to latest version of mumi. 
* gnu/services/web.scm (%mumi-activation): Create /var/mumi/db.
(mumi-shepherd-services): Add service for mumi worker.
 2020-03-12 12:47:45 +01:00
Ricardo Wurmus
c107e50a0e
gnu: mumi: Update to 0.0.0-7.6653e2d. 
* gnu/packages/mail.scm (mumi): Update to 0.0.0-7.6653e2d.
[inputs]: Add guile-sqlite3.
 2020-03-12 12:47:45 +01:00
Ricardo Wurmus
e4cdadc18d
gnu: r-cairo: Update to 1.5-11. 
* gnu/packages/statistics.scm (r-cairo): Update to 1.5-11.
 2020-03-12 12:47:45 +01:00
Felix Gruber
0a703c0486
gnu: dune-istl: Build with suitesparse 
* gnu/packages/maths.scm (dune-istl)[inputs]: Add suitesparse to build
additional solvers in dune-istl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-03-12 11:52:38 +01:00
Felix Gruber
f1f9466e33
gnu: Add dune-subgrid 
* gnu/packages/maths.scm (dune-subgrid): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-03-12 11:52:38 +01:00
Felix Gruber
07ebb75d17
gnu: Add dune-uggrid. 
* gnu/packages/maths.scm (dune-uggrid): New variable.
(dune-grid)[propagated-inputs]: Add dune-uggrid dependency, so
that the UGGrid class in dune-grid can be used by packages that
have dune-grid as input.
(dune-functions)[arguments]: Enable tests that previously weren't
built as they require dune-uggrid.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-03-12 11:52:38 +01:00
Felix Gruber
a669f6e27b
gnu: dune-*: set up MPI for tests 
* gnu/packages/maths.scm (dune-common, dune-grid, dune-istl,
dune-alugrid): [arguments]: correctly set up MPI instead of disabling
tests that require MPI.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-03-12 11:52:38 +01:00
Ludovic Courtès
f7537e30b8
inferior: Distinguish inferior exceptions. 
This avoids ambiguities when looking at a backtrace where the exception
was actually thrown by an inferior in a very different context.

* guix/inferior.scm (&inferior-exception): New condition type.
(read-repl-response): Add optional 'inferior' parameter.  Raise
'&inferior-exception' instead of rethrowing to KEY when receiving an
'exception' message.
(read-inferior-response): Pass INFERIOR to 'read-repl-response'.
* tests/inferior.scm ("&inferior-exception"): New test.
 2020-03-12 11:52:38 +01:00
Ludovic Courtès
c00ae79cca
import: cpan: Gracefully handle missing projects. 
* guix/import/cpan.scm (cpan-fetch): Check whether 'json-fetch' returns #f.
 2020-03-12 11:52:38 +01:00
Ludovic Courtès
2d0409a4a2
import: utils: Remove 'assoc-ref*'. 
* guix/import/utils.scm (assoc-ref*): Remove.
 2020-03-12 11:52:37 +01:00
Ludovic Courtès
7657e61d6b
import: pypi: Rewrite to use 'define-json-mapping'. 
* guix/import/pypi.scm (non-empty-string-or-false): New procedure.
(<pypi-project>, <project-info>, <distribution>): New record types.
(pypi-fetch): Call 'json->pypi-project'.
(latest-source-release, latest-wheel-release): Use the new record
accessors instead of 'assoc-ref*'.
(pypi->guix-package, latest-release): Likewise.
* tests/pypi.scm (test-json): Add mandatory fields.
 2020-03-12 11:52:37 +01:00
Ludovic Courtès
a20cfe71e9
gnu: guile-next: Enable JIT on ARMv7. 
JIT support on ARMv7 is fixed by "guile-3.0-crash.patch".

* gnu/packages/guile.scm (guile-3.0)[arguments]: Remove.
 2020-03-12 11:52:21 +01:00
Guillaume Le Vaillant
ec73c90ee3
gnu: Add virtualpg. 
* gnu/packages/geo.scm (virtualpg): New variable.
 2020-03-12 10:08:45 +01:00
Guillaume Le Vaillant
69b03ecd95
gnu: jgmenu: Update to 4.1.0. 
* gnu/packages/xdisorg.scm (jgmenu): Update to 4.1.0.
 2020-03-12 10:08:45 +01:00
Guillaume Le Vaillant
034d9544e2
gnu: udiskie: Update to 2.1.0. 
* gnu/packages/freedesktop.scm (udiskie): Update to 2.1.0.
 2020-03-12 10:08:45 +01:00
Guillaume Le Vaillant
0aedcf4bc3
gnu: txr: Update to 233. 
* gnu/packages/lisp.scm (txr): Update to 233.
 2020-03-12 10:08:45 +01:00
Danny Milosavljevic
04b4c43232
doc: Fix description for "guix package -A". 
* doc/guix.texi (Invoking guix package): Fix description for "guix package -A".
 2020-03-12 09:55:20 +01:00
Efraim Flashner
d8ba1135eb
gnu: python2-ipython: Fix build. 
* gnu/packages/python-xyz.scm (python2-ipython)[arguments]: Adjust
skipped tests.
 2020-03-12 10:25:42 +02:00
Tobias Geerinckx-Rice
bf8ee1c504
gnu: xlockmore: Update to 5.62. 
* gnu/packages/xdisorg.scm (xlockmore): Update to 5.62.
 2020-03-12 05:10:21 +01:00
Tobias Geerinckx-Rice
81166ee488
gnu: xlockmore: Use HTTPS home page. 
* gnu/packages/xdisorg.scm (xlockmore)[home-page]: Use HTTPS.
 2020-03-12 04:57:46 +01:00