Commit graph

310 commits

Author SHA1 Message Date
Eric Bavier d320daf7df
gnu: Add Gappa.
* gnu/packages/algebra.scm (gappa): New variable.
2021-06-23 22:29:24 -05:00
Eric Bavier 6d388103a4
gnu: Add Sollya.
* gnu/packages/algebra.scm (sollya): New variable.
* .mailmap: Adjust "proper email" for `git commit`.
2021-06-23 22:29:23 -05:00
Andreas Enge 91defaf245
gnu: mpfrcx: Update to 0.6.2.
* gnu/packages/algebra.scm (mpfrcx): Update to 0.6.2.
2021-06-21 16:44:26 +02:00
Nicolas Goaziou 9f1d2085df
gnu: giac: Update to 1.7.0-13.
* gnu/packages/algebra.scm (giac): Update to 1.7.0-13.
2021-06-18 11:54:06 +02:00
Nicolas Goaziou 38eaba9a8e
gnu: giac: Update to 1.7.0-11.
* gnu/packages/algebra.scm (giac): Update to 1.7.0-11.
2021-06-05 17:24:13 +02:00
Ricardo Wurmus c2b6d36b66
gnu: pari-gp: Use patched texlive-amsfonts.
* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Use
texlive-amsfonts/patched.
2021-06-05 09:26:13 +02:00
Nicolas Goaziou f161623913
gnu: giac: Update to 1.7.0-9.
* gnu/packages/algebra.scm (giac): Update to 1.7.0-9.
2021-05-21 17:23:01 +02:00
Nicolas Goaziou 646a722658
gnu: giac: Update to 1.7.0-5.
* gnu/packages/algebra.scm (giac): Update to 1.7.0-5.
2021-05-07 17:45:04 +02:00
Andreas Enge df0b723345
gnu: mpfrcx: Update to 0.6.1.
* gnu/packages/algebra.scm (mpfrcx): Update to 0.6.1.
2021-04-29 15:44:15 +02:00
Nicolas Goaziou bbdd43fd11
gnu: giac: Update to 1.7.0-3.
* gnu/packages/algebra.scm (giac): Update to 1.7.0-3.
2021-04-28 21:37:16 +02:00
Tobias Geerinckx-Rice 50a3251667
gnu: ntl: Update to 11.4.4.
* gnu/packages/algebra.scm (ntl): Update to 11.4.4.
2021-03-27 20:52:19 +01:00
Nicolas Goaziou 2ee361c764
gnu: giac: Update to 1.7.0-1.
* gnu/packages/algebra.scm (giac): Update to 1.7.0-1.
2021-03-23 18:12:17 +01:00
Mark H Weaver 1a265842e6
gnu: Use PACKAGE/INHERIT in more places.
* gnu/packages/algebra.scm (fftwf, fftw-openmpi),
gnu/packages/audio.scm (ztoolkit-rsvg),
gnu/packages/bioinformatics.scm (python2-dendropy),
gnu/packages/boost.scm (boost-with-python2),
gnu/packages/check.scm (python2-mock, python2-pytest-mock),
gnu/packages/cups.scm (hplip-minimal),
gnu/packages/freedesktop.scm (libinput-minimal),
gnu/packages/gettext.scm (gnu-gettext),
gnu/packages/glib.scm (python2-pygobject),
gnu/packages/gnome.scm (gdl-minimal, libsoup-minimal, python2-pyatspi),
gnu/packages/groff.scm (groff-minimal),
gnu/packages/jami.scm (ffmpeg-jami),
gnu/packages/libcanberra.scm (libcanberra/gtk+-2),
gnu/packages/lirc.scm (python2-lirc),
gnu/packages/llvm.scm (clang-runtime-3.5),
gnu/packages/mpi.scm (java-openmpi, openmpi-thread-multiple),
gnu/packages/node.scm (libnode),
gnu/packages/onc-rpc.scm (libtirpc/hurd),
gnu/packages/python-compression.scm (bitshuffle-for-snappy),
gnu/packages/python-crypto.scm (python2-pycrypto, python2-cryptography)
(python2-cryptography, python2-m2crypto),
gnu/packages/python-web.scm (python2-html2text, python2-tornado)
(python2-terminado, python2-ndg-httpsclient, python2-websocket-client)
(python2-rauth, python2-url, python2-s3transfer),
gnu/packages/python-xyz.scm (python2-psutil, python2-serpent)
(python2-humanfriendly, python2-empy, python2-parse-type, python2-polib)
(python2-jsonschema, python2-pystache, python2-cython, python2-numpydoc)
(python2-ipyparallel, python2-traitlets, python2-dbus)
(python2-beautifulsoup4, python2-pep517, python2-flake8, python2-llfuse)
(python2-tlsh, python-file, python2-notebook, python-jupyter-console-minimal)
(python2-contextlib2, python2-promise, python2-anyjson, python2-amqp)
(python2-kombu, python2-billiard, python2-celery, python2-whoosh)
(python2-jellyfish, python-rope, ptpython-2, python2-binaryornot)
(python2-setproctitle, python2-argcomplete, python2-xopen, python2-isort)
(python2-radon, python2-rfc6555, python2-activepapers, python2-send2trash)
(python2-cloudpickle, python2-reparser),
gnu/packages/python.scm (python2-called-python),
gnu/packages/qt.scm (python2-sip, python-pyqt-without-qtwebkit, python2-pyqt)
(python-qscintilla, python-pyqt+qscintilla),
gnu/packages/scanner.scm (sane-backends),
gnu/packages/sdl.scm (guile3.0-sdl2),
gnu/packages/selinux.scm (checkpolicy, libselinux, libsemanage, secilc)
(python-sepolgen, policycoreutils),
gnu/packages/serialization.scm (lua5.1-libmpack, lua5.2-libmpack),
gnu/packages/simulation.scm (fenics),
gnu/packages/statistics.scm (python2-statsmodels),
gnu/packages/texinfo.scm (info-reader),
gnu/packages/wxwidgets.scm (wxwidgets-gtk2, wxwidgets-gtk2-3.1),
gnu/packages/xml.scm (xmlsec-nss),
gnu/packages/xorg.scm (uim-gtk, uim-qt),
guix/build-system/python.scm (package-with-explicit-python)
(strip-python2-variant): Use PACKAGE/INHERIT.
2021-03-17 03:58:10 -04:00
Lars-Dominik Braun ed48898931
gnu: Add r-dtt.
* gnu/packages/algebra.scm (r-dtt): New variable.
2021-03-15 10:52:57 +01:00
Efraim Flashner 12640deb50
gnu: symengine: Fix build.
* gnu/packages/algebra.scm (symengine)[native-inputs]: Remove llvm.
[arguments]: Adjust accordingly.
2021-03-09 15:44:31 +02:00
Nicolas Goaziou ac93e58310
gnu: singular: Use HTTPS home page URI.
* gnu/packages/algebra.scm (singular)[home-page]: Use HTTPS URI.
2021-02-28 12:00:51 +01:00
Nicolas Goaziou f54b11b91d
gnu: python-flint: Use HTTPS home page URI.
* gnu/packages/algebra.scm (python-flint)[home-page]: Use HTTPS URI.
2021-02-28 11:24:32 +01:00
Andreas Enge 099026df5b
gnu: cmh: Update to 1.1.0.
* gnu/packages/algebra.scm (cmh): Update to 1.1.0.
(fplll-4-cmh): Remove variable.
2021-02-26 10:44:09 +01:00
Andreas Enge 9d22c0ca39
gnu: pari-gp: Update to 2.13.1.
* gnu/packages/algebra.scm (pari-gp): Update to 2.13.1.
2021-02-12 12:13:10 +01:00
Nicolas Goaziou 9a062ce9b5
gnu: giac: Update to 1.6.0-47.
* gnu/packages/algebra.scm (giac): Update to 1.6.0-47.
2021-01-22 16:21:41 +01:00
Ludovic Courtès 9673402d02
gnu: cmh: Update source code URL.
Partly fixes <https://bugs.gnu.org/42162>.

* gnu/packages/algebra.scm (cmh)[source, home-page]: Refer to
multiprecision.org.
2021-01-13 16:26:58 +01:00
Andreas Enge 56bfc71f0b
gnu: gmp-ecm: Update source URI.
* gnu/packages/algebra.scm (gmp-ecm): Update source URI from gforge.inria.fr
to gitlab.inria.fr.
2021-01-13 16:02:58 +01:00
Nicolas Goaziou 28f15b985f
gnu: giac: Update to 1.6.0-41.
* gnu/packages/algebra.scm (giac): Update to 1.6.0-41.
2021-01-02 21:12:18 +01:00
Nicolas Goaziou 2f4dcff4c2
gnu: arb: Use HTTPS home page URI.
* gnu/packages/algebra.scm (arb)[home-page]: Use HTTPS URI.  Move above
synopsis.
2020-12-19 15:58:01 +01:00
Efraim Flashner 885fe927e7
gnu: glpk: Update to 5.0.
* gnu/packages/maths.scm (glpk): Update to 5.0.
(glpk-4.65): New variable.
* gnu/packages/algebra.scm (giac)[inputs]: Replace glpk with glpk-4.
2020-12-17 22:26:30 +02:00
Andreas Enge 19c782b3ca
gnu: gp2c: Update to 0.0.12.
* gnu/packages/algebra.scm (gp2c): Update to 0.0.12.
2020-12-13 15:07:40 +01:00
Tobias Geerinckx-Rice ba902a1598
gnu: eigen: Add upstream bugfix patch.
This fixes the build of nanopolish, imp, and others.

Reported by apteryx in #guix.

* gnu/packages/algebra.scm (eigen)[source]: Add patch.
* gnu/packages/patches/eigen-remove-openmp-error-counting.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-23 19:22:31 +01:00
Tobias Geerinckx-Rice 2d2ac74237
gnu: eigen: Update to 3.3.8.
* gnu/packages/algebra.scm (eigen): Update to 3.3.8.
2020-11-19 00:08:40 +01:00
Nicolas Goaziou 191a4ced8e
gnu: giac: Update to 1.6.0-31.
* gnu/packages/algebra.scm (giac): Update to 1.6.0-31.
2020-11-11 14:14:17 +01:00
Efraim Flashner 57797b8533
gnu: eigen: Add source mirror.
* gnu/packages/algebra.scm (eigen)[source]: Add Debian source mirror.
2020-11-09 09:54:52 +02:00
Efraim Flashner 7c30e2348b
gnu: xtensor: Update URIs.
* gnu/packages/algebra.scm (xtensor)[source]: Update to new URI.
[home-page]: Same.
2020-11-08 22:43:39 +02:00
Andreas Enge 6657d73942
gnu: pari-gp: Update to 2.13.0.
* gnu/packages/algebra.scm (pari-gp): Update to 2.13.0.
2020-10-20 17:11:15 +02:00
Nicolas Goaziou 1ceeaa5dff
gnu: giac: Update to 1.6.0-25.
* gnu/packages/algebra.scm (giac): Update to 1.6.0-25.
[native-inputs]: Add hevea.
2020-10-07 21:38:40 +02:00
Efraim Flashner 1628d57bb5
gnu: Fix package references.
* gnu/packages/algebra.scm (iml)[inputs]: Correctly refer to package
inputs.
* gnu/packages/astronomy.scm (xplanet),
* gnu/packages/audio.scm (redkite, libaudec, lv2lint, lv2toweb),
* gnu/packages/bioconductor.scm (r-cummerbund),
* gnu/packages/chicken.scm (chicken),
* gnu/packages/conky.scm (conky),
* gnu/packages/cran.scm (r-latex2exp),
* gnu/packages/crates-io.scm (rust-rgb),
* gnu/packages/databases.scm (mariadb),
* gnu/packages/diffoscope.scm (reprotest),
* gnu/packages/file-systems.scm (glusterfs),
* gnu/packages/finance.scm (electron-cash),
* gnu/packages/games.scm (rinutils, ksudoku, kdiamond, kigo),
* gnu/packages/geo.scm (grass),
* gnu/packages/gnome.scm (libmediaart, gnome-contacts, geoclue),
* gnu/packages/gnucash.scm (aqbanking),
* gnu/packages/image.scm (mtpaint),
* gnu/packages/kde-internet.scm (kopete, ktorrent),
* gnu/packages/kde-utils.scm (kmousetool, kmouth, kronometer),
* gnu/packages/linphone.scm (liblinphone),
* gnu/packages/maths.scm (ppl),
* gnu/packages/mercury.scm (mercury-minimal),
* gnu/packages/music.scm (bjumblr, bschaffl, lsp-plugins,
spectacle-analyzer, helm, tap-lv2, wolf-shaper, shiru-lv2),
* gnu/packages/networking.scm (restinio),
* gnu/packages/prolog.scm (swi-prolog),
* gnu/packages/python-web.scm (gunicorn),
* gnu/packages/python-xyz.scm (python-docusign-esign),
* gnu/packages/ruby.scm (ruby-cucumber, ruby_version, ruby-addressable),
* gnu/packages/sagemath.scm (python-cypari2),
* gnu/packages/skarnet.scm (s6-linux-init),
* gnu/packages/vpn.scm (sshuttle),
* gnu/packages/web.scm (libcyaml),
* gnu/packages/xdisorg.scm (kbdd),
* gnu/packages/xorg.scm (xpra): Same.
2020-09-30 09:28:26 +03:00
Nicolas Goaziou 07c3c3ba53
gnu: giac: Update to 1.6.0-23.
* gnu/packages/algebra.scm (giac): Update to 1.6.0-23.
[arguments]: Fix more hard-coded /bin/cp in Make files.
[native-inputs]: Add python-wrapper.
2020-09-29 13:57:38 +02:00
Andreas Enge 4c09ec43db
gnu: cm: Update to 0.3.1.
* gnu/packages/algebra.scm (cm): Update to 0.3.1.
2020-09-28 19:39:23 +02:00
Andreas Enge 049a1714fc
gnu: fplll: Correct include files.
* gnu/packages/patches/fplll-std-fenv.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/algebra.scm (fplll): Use patch and move all inputs to
propagated-inputs.
2020-09-23 14:14:09 +02:00
Andreas Enge 82f983da35
gnu: fplll: Update to 5.3.3.
* gnu/packages/algebra.scm (fplll): Update to 5.3.3.
[native-inputs]: Add pkg-config.
2020-09-23 13:59:32 +02:00
Andreas Enge 42ed53173e
gnu: gap: Update to 4.11.0.
* gnu/packages/algebra.scm (gap)[source]: Update to 4.11.0. Identify kept
packages by name prefix, dropping version number comparisons.
[inputs]: Add readline.
[arguments]: Use make targets instead of file copying where possible.
2020-09-01 13:27:42 +02:00
Andreas Enge 280455809d
gnu: python-fpylll: Update to 0.5.2.
* gnu/packages/algebra.scm (python-fpylll): Update to 0.5.2.
2020-08-20 19:27:10 +02:00
Andreas Enge b9ef00258c
gnu: fplll: Update to 5.3.2.
* gnu/packages/algebra.scm (fplll): Update to 5.3.2.
2020-08-20 19:23:03 +02:00
Efraim Flashner e188d2f8aa
gnu: cmh: Update home-page.
* gnu/packages/algebra.scm (cmh)[home-page]: Update to new home-page.
2020-08-19 21:34:41 +03:00
Andreas Enge 5f8ea8e491
gnu: mpfrcx: Update to 0.6.
* gnu/packages/algebra.scm (mpfrcx): Update to 0.6.
2020-08-18 16:50:32 +02:00
Tobias Geerinckx-Rice eefa30c1c6
gnu: flint: Update to 2.6.3.
* gnu/packages/algebra.scm (flint): Update to 2.6.3.
[license]: Update to LGPL 2.1+.
2020-08-15 22:09:06 +02:00
Tobias Geerinckx-Rice 2d80caa86c
gnu: flint: Add a comment about the licence.
* gnu/packages/algebra.scm (flint): Note the upstream licence change/fix.

Reported by Max Horn <max@quendi.de>.
2020-08-08 21:22:39 +02:00
Tobias Geerinckx-Rice a8139e9785
gnu: flint: Update to 2.6.2.
* gnu/packages/algebra.scm (flint): Update to 2.6.2.
2020-08-08 14:27:07 +02:00
Tobias Geerinckx-Rice fa0c177493
gnu: flint: Update to 2.6.1.
* gnu/packages/algebra.scm (flint): Update to 2.6.1.
2020-07-25 22:13:24 +02:00
Andreas Enge 7dcf529673
arb: Update to 2.18.1.
* gnu/packages/patches/arb-flint-2.6.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/algebra.scm (arb): Update to 2.18.1.
[source](patches): Remove.
2020-07-22 12:20:24 +02:00
Andreas Enge e239135c56
gnu: gp2c: Update to 0.0.11pl4.
* gnu/packages/algebra.scm (gp2c): Update to 0.0.11pl4.
2020-07-22 12:13:04 +02:00
Ludovic Courtès b0e7b6992f
gnu: Remove ".git" from "https://github/…/….git".
Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix
swh) would sometimes return #f for these because the ".git" URLs are
redirects to the non-".git" URLs.  Consequently, 'guix lint -c archival'
would keep saying "scheduled Software Heritage archival"; likewise, the
fallback download code would fail.

* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/aidc.scm,
gnu/packages/algebra.scm,
gnu/packages/android.scm,
gnu/packages/animation.scm,
gnu/packages/arcan.scm,
gnu/packages/assembly.scm,
gnu/packages/audio.scm,
gnu/packages/authentication.scm,
gnu/packages/avr.scm,
gnu/packages/axoloti.scm,
gnu/packages/backup.scm,
gnu/packages/bash.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioconductor.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/boost.scm,
gnu/packages/build-tools.scm,
gnu/packages/c.scm,
gnu/packages/calendar.scm,
gnu/packages/cdrom.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/chez.scm,
gnu/packages/clojure.scm,
gnu/packages/code.scm,
gnu/packages/compression.scm,
gnu/packages/compton.scm,
gnu/packages/coq.scm,
gnu/packages/cpp.scm,
gnu/packages/cran.scm,
gnu/packages/crypto.scm,
gnu/packages/curl.scm,
gnu/packages/databases.scm,
gnu/packages/datastructures.scm,
gnu/packages/debug.scm,
gnu/packages/disk.scm,
gnu/packages/distributed.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/dns.scm,
gnu/packages/docker.scm,
gnu/packages/education.scm,
gnu/packages/efi.scm,
gnu/packages/elixir.scm,
gnu/packages/emacs-xyz.scm,
gnu/packages/embedded.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/erlang.scm,
gnu/packages/fabric-management.scm,
gnu/packages/file-systems.scm,
gnu/packages/finance.scm,
gnu/packages/firmware.scm,
gnu/packages/flashing-tools.scm,
gnu/packages/fonts.scm,
gnu/packages/fontutils.scm,
gnu/packages/fpga.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/genealogy.scm,
gnu/packages/genimage.scm,
gnu/packages/geo.scm,
gnu/packages/gimp.scm,
gnu/packages/gl.scm,
gnu/packages/gnome-xyz.scm,
gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/golang.scm,
gnu/packages/gpodder.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/groff.scm,
gnu/packages/groovy.scm,
gnu/packages/gtk.scm,
gnu/packages/guile-xyz.scm,
gnu/packages/guile.scm,
gnu/packages/hardware.scm,
gnu/packages/haskell-apps.scm,
gnu/packages/haskell-xyz.scm,
gnu/packages/hexedit.scm,
gnu/packages/i2p.scm,
gnu/packages/ibus.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/ipfs.scm,
gnu/packages/java-graphics.scm,
gnu/packages/java-maths.scm,
gnu/packages/java.scm,
gnu/packages/javascript.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/jupyter.scm,
gnu/packages/kodi.scm,
gnu/packages/language.scm,
gnu/packages/lego.scm,
gnu/packages/less.scm,
gnu/packages/libusb.scm,
gnu/packages/linux.scm,
gnu/packages/lirc.scm,
gnu/packages/lisp-xyz.scm,
gnu/packages/llvm.scm,
gnu/packages/logging.scm,
gnu/packages/lolcode.scm,
gnu/packages/lua.scm,
gnu/packages/lxde.scm,
gnu/packages/lxqt.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/markup.scm,
gnu/packages/maths.scm,
gnu/packages/maven.scm,
gnu/packages/mes.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/node-xyz.scm,
gnu/packages/ocaml.scm,
gnu/packages/ocr.scm,
gnu/packages/onc-rpc.scm,
gnu/packages/opencl.scm,
gnu/packages/opencog.scm,
gnu/packages/pantheon.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/perl6.scm,
gnu/packages/phabricator.scm,
gnu/packages/popt.scm,
gnu/packages/printers.scm,
gnu/packages/prolog.scm,
gnu/packages/protobuf.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/python-xyz.scm,
gnu/packages/qt.scm,
gnu/packages/radio.scm,
gnu/packages/rails.scm,
gnu/packages/rdf.scm,
gnu/packages/rednotebook.scm,
gnu/packages/rpc.scm,
gnu/packages/rsync.scm,
gnu/packages/ruby.scm,
gnu/packages/rust.scm,
gnu/packages/scheme.scm,
gnu/packages/screen.scm,
gnu/packages/security-token.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/shellutils.scm,
gnu/packages/simh.scm,
gnu/packages/sml.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/stenography.scm,
gnu/packages/sync.scm,
gnu/packages/syncthing.scm,
gnu/packages/synergy.scm,
gnu/packages/telephony.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tmux.scm,
gnu/packages/tor.scm,
gnu/packages/toys.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/vim.scm,
gnu/packages/virtualization.scm,
gnu/packages/vlang.scm,
gnu/packages/vnc.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wireservice.scm,
gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm,
tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
2020-07-12 23:08:15 +02:00