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Author SHA1 Message Date
Ricardo Wurmus 9485578570
gnu: java-native-access: Use older GCC. 
* gnu/packages/java.scm (java-native-access)[native-inputs]: Add gcc-7 to fix
the build.
 2021-12-05 01:03:31 +01:00
Ricardo Wurmus 48235c37db
gnu: java-commons-math3: Remove trailing #T. 
* gnu/packages/java.scm (java-commons-math3)[arguments]: Remove trailing #T
from build phase.
 2021-12-05 00:49:06 +01:00
Ricardo Wurmus 1e7bd5e679
gnu: salmon: Remove reference to %build-inputs. 
* gnu/packages/bioinformatics.scm (salmon)[arguments]: Use a gexp to remove
reference to %build-inputs.
 2021-12-05 00:49:06 +01:00
Ryan Desfosses 20d525a842
gnu: Add libphonenumber 
* gnu/package/messaging.scm (libphonenumber): New variable

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-04 23:03:54 +01:00
Artyom V. Poptsov ac872546fc
gnu: Add guile-smc 
* gnu/packages/guile-xyz.scm (guile-smc): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-04 22:45:27 +01:00
Ludovic Courtès 3ee142ebd6
gnu: libhandy: Skip test that requires librsvg on non-x86_64. 
* gnu/packages/gnome.scm (libhandy)[arguments]: Add
'skip-test-that-requires-svg' phase on non-x86_64.
 2021-12-04 22:39:47 +01:00
Ludovic Courtès 73f78d556b
gnu: gtranslator: Update to 40.0. 
* gnu/packages/gnome.scm (gtranslator): Update to 40.0.
[inputs]: Add LIBHANDY.
 2021-12-04 22:39:46 +01:00
Ludovic Courtès d4c4348d83
gnu: gtranslator: Fix compilation. 
* gnu/packages/gnome.scm (gtranslator)[inputs]: Replace LIBSOUP with
LIBSOUP-MINIMAL-2.
[arguments]: Pass #:meson.
 2021-12-04 22:39:46 +01:00
Ludovic Courtès 3f03f502ee
gnu: libgda: Do not use the bundled sqlite. 
* gnu/packages/gnome.scm (libgda)[source]: Add snippet.
[arguments]: Pass "--enable-system-sqlite".
[inputs]: Add SQLITE.
 2021-12-04 22:39:46 +01:00
Julien Lepiller 634b46a469
gnu: java-commons-math3: Remove references to %build-inputs. 
* gnu/packages/java.scm (java-commons-math3)[arguments]: Use a gexp
to remove references to %build-inputs.
 2021-12-04 22:07:26 +01:00
Julien Lepiller ba5cb6456d
gnu: java-commons-collections4: Remove references to %build-inputs. 
* gnu/packages/java.scm (java-commons-collections4)[arguments]: Use a gexp
to remove references to %build-inputs.
 2021-12-04 22:07:17 +01:00
Julien Lepiller 035fec27fc
gnu: java-commons-exec-1.1: Remove references to %build-inputs. 
* gnu/packages/java.scm (java-commons-exec-1.1)[arguments]: Use a gexp
to remove references to %build-inputs.
 2021-12-04 22:07:11 +01:00
Julien Lepiller 5a4ad372ef
gnu: java-commons-exec: Remove references to %build-inputs. 
* gnu/packages/java.scm (java-commons-exec)[arguments]: Use a gexp to
remove references to %build-inputs.
 2021-12-04 22:06:49 +01:00
Julien Lepiller 2aee138485
gnu: maven-components-parent-pom-22: Remove references to %build-inputs. 
* gnu/packages/maven-parent-pom.scm (maven-components-parent-pom-22)
[arguments]: Use a gexp to remove references to %build-inputs.
 2021-12-04 22:06:41 +01:00
Julien Lepiller d29f14aca2
gnu: java-sonatype-oss-parent-pom-9: Remove references to %build-inputs. 
* gnu/packages/maven-parent-pom.scm (java-sonatype-oss-parent-pom-9)
[arguments]: Use a gexp to remove references to %build-inputs.
 2021-12-04 22:06:23 +01:00
Ludovic Courtès f044ffc1c4
gnu: ocaml4.07-ppx-let: Make 'properties' an alist. 
The incorrect 'properties' value was introduced in
3649c56a5f.

* gnu/packages/ocaml.scm (ocaml4.07-ppx-let)[properties]: Turn into an
alist.
 2021-12-04 21:57:27 +01:00
Ricardo Wurmus 98d2abe523
gnu: sailfish: Remove references to %build-inputs. 
* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use a gexp to remove
references to %build-inputs.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus 39e2a84f52
gnu: sailfish: Simplify snippet. 
* gnu/packages/bioinformatics.scm (sailfish)[source]: Remove trailing #T from
snippet.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus b0fd09f856
gnu: piranha: Remove references to %build-inputs. 
* gnu/packages/bioinformatics.scm (piranha)[arguments]: Use gexp to remove
references to %build-inputs.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus 01d2e2b334
gnu: piranha: Remove trailing #T. 
* gnu/packages/bioinformatics.scm (piranha)[arguments]: Remove trailing #T
from build phases.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus 502538c6e4
gnu: emboss: Remove reference to %build-inputs. 
* gnu/packages/bioinformatics.scm (emboss)[arguments]: Use gexp to remove
reference to %build-inputs.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus 2657bdc100
gnu: vcftools: Replace references to %outputs. 
* gnu/packages/bioinformatics.scm (vcftools)[arguments]: Use gexp to remove
references to %outputs.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus eec1bdcd9e
gnu: seqan-1: Use gexp for builder. 
* gnu/packages/bioinformatics.scm (seqan-1)[arguments]: Use a gexp to remove
references to %build-inputs and %outputs.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus 2c1c75a56c
gnu: seqan-2: Use gexp for builder. 
* gnu/packages/bioinformatics.scm (seqan-2)[arguments]: Use a gexp to remove
references to %build-inputs and %outputs.
 2021-12-04 19:54:28 +01:00
Ricardo Wurmus f41576c09f
gnu: sra-tools: Remove references to %build-inputs. 
* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use a gexp instead
of referencing %build-inputs.
 2021-12-04 19:54:27 +01:00
Ricardo Wurmus f33e490334
gnu: preseq: Remove references to %outputs and %build-inputs. 
* gnu/packages/bioinformatics.scm (preseq)[arguments]: Replace references to
%outputs and %build-inputs by using a gexp.
 2021-12-04 19:54:27 +01:00
Ricardo Wurmus 8a446f5e41
gnu: preseq: Simplify snippet. 
* gnu/packages/bioinformatics.scm (preseq)[source]: Simplify snippet.
 2021-12-04 19:54:27 +01:00
Julien Lepiller 7fcb20a8fa
nls: Update translations. 2021-12-04 19:40:52 +01:00
zimoun bd746917a2
gnu: julia-forwarddiff: Disable tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-forwarddiff)[arguments]<#:tests?>:
Conditionally disable tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:33 +02:00
zimoun 82586916be
gnu: julia-geometrybasics: Fix tests on i686-linux. 
* gnu/packages/julia-xyz (julia-geometrybasics)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:33 +02:00
zimoun eb4f1fcf74
gnu: julia-structarrays: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-structarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in the test suite.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:32 +02:00
zimoun afd35e8e9c
gnu: julia-mutablearithmetics: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-mutablearithmetics)[arguments]<#:phases>:
Conditionally disable the failing test.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:32 +02:00
zimoun 630824a238
gnu: julia-woodburymatrices: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-woodburymatrices)[arguments]<#:phases>:
Conditionally disable the failing test.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:32 +02:00
zimoun 828012ed9f
gnu: julia-intervalsets: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-intervalsets)[arguments]<#:phases>:
Conditionally disable the failing test.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:32 +02:00
zimoun 29c0410086
gnu: julia-reversediff: Disable tests on i686-linux. 
* gnu/packages/julia-xyz (julia-reversediff)[arguments]<#:tests?>:
Conditionally disable tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:31 +02:00
zimoun 28d530ea44
gnu: julia-interpolations: Disable tests in i686-linux. 
* gnu/packages/julia-xyz.scm (julia-interpolations)[arguments]<#:tests?>:
Conditionally disable tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:31 +02:00
zimoun e3c15b0bfc
gnu: julia-arrayinterface: Disable tests for i686. 
* gnu/packages/julia-xyz.scm (julia-arrayinterface)[arguments]<#:tests?>:
Conditionally disable tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:31 +02:00
zimoun 7c8e9cbfa9
gnu: julia-mappedarrays: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-mappedarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:30 +02:00
zimoun dcd7c950c6
gnu: julia-blockarrays: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-blockarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:30 +02:00
zimoun 557caa4e2c
gnu: julia-lazyarrays: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-lazyarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:30 +02:00
zimoun dbad333481
gnu: julia-configurations: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-configurations)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:30 +02:00
zimoun a31a4517b6
gnu: julia-finitedifferences: Fix tests on i686-linux. 
* gnu/packages/julia-xyz (julia-finitedifferences)[arguments]<#:phases>:
Conditionnally disable the failing test.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:29 +02:00
zimoun 2a749f34e5
gnu: julia-benchmarktools: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-benchmarktools)[arguments]<#:phases>:
Conditionnally disable the failing tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:29 +02:00
zimoun 7fee8a46fb
gnu: julia-datastructures: Fix tests on i686-linux. 
* gnu/packages/julia-xyz.scm (julia-datastructures)[arguments]<#:phases>:
Conditionnally disable the failing test.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:50:29 +02:00
zimoun 9112bed608
gnu: libunwind-julia: Fix build on i686-linux. 
* gnu/packages/julia.scm (libunwind)[origin]<patches>: Add patch.
* gnu/packages/patches/libunwind-julia-fix-GCC10-fno-common.patch: New file.
* gnu/local/mk (dist_patch_DATA): Register it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-04 19:33:30 +02:00
Nicolas Goaziou f199427c1b
gnu: emacs-org-roam-bibtex: Update to 0.6.1. 
* gnu/packages/emacs-xyz.scm (emacs-org-roam-bibtex): Update to 0.6.1.
 2021-12-04 16:17:58 +01:00
Ricardo Wurmus cc491eab7e
gnu: plink-ng: Enable tests. 
* gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Replace 'check phase
to run tests; do not disable tests via arguments.
[native-inputs]: Add diffutils, plink, and python.
 2021-12-04 16:00:08 +01:00
Ricardo Wurmus e28b8a9cea
gnu: plink-ng: Replace reference to %outputs. 
* gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Remove reference to
%outputs by using a gexp.
 2021-12-04 15:35:28 +01:00
Ricardo Wurmus 88bb81b515
gnu: plink: Remove reference to %build-inputs. 
* gnu/packages/bioinformatics.scm (plink)[arguments]: Use a gexp to replace
reference to %build-inputs.
 2021-12-04 15:31:31 +01:00
Ricardo Wurmus e920101141
gnu: plink: Remove trailing #T. 
* gnu/packages/bioinformatics.scm (plink)[arguments]: Remove trailing #T from
build phase.
 2021-12-04 15:31:08 +01:00