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103955 commits

Author SHA1 Message Date
Mădălin Ionel Patrașcu
a4c738f40f
gnu: Add r-catdata.
* gnu/packages/cran.scm (r-catdata): New variable.
2022-10-31 20:12:27 +01:00
Mădălin Ionel Patrașcu
72315072d6
gnu: Add r-forestplot.
* gnu/packages/cran.scm (r-forestplot): New variable.
2022-10-31 20:10:19 +01:00
Mădălin Ionel Patrașcu
6e0361d035
gnu: Add r-decontam.
* gnu/packages/bioconductor.scm (r-decontam): New variable.
2022-10-31 20:00:17 +01:00
Mădălin Ionel Patrașcu
fc27bf5d74
gnu: Add r-deconrnaseq.
* gnu/packages/bioconductor.scm (r-deconrnaseq): New variable.
2022-10-31 19:59:30 +01:00
Mădălin Ionel Patrașcu
ae94d879a1
gnu: Add r-decomptumor2sig.
* gnu/packages/bioconductor.scm (r-decomptumor2sig): New variable.
2022-10-31 19:59:01 +01:00
Mădălin Ionel Patrașcu
a8631c816d
gnu: Add r-decomplexdisease.
* gnu/packages/bioconductor.scm (r-decomplexdisease): New variable.
2022-10-31 19:58:32 +01:00
Mădălin Ionel Patrașcu
41461b6e22
gnu: Add r-deco.
* gnu/packages/bioconductor.scm (r-deco): New variable.
2022-10-31 19:57:53 +01:00
Ricardo Wurmus
22c8783dff
gnu: Add ghc-6.10.
* gnu/packages/haskell.scm (ghc-6.10): New variable.
2022-10-31 19:51:40 +01:00
Ricardo Wurmus
26e1f3ec9a
gnu: ghc-6.6: Patch more references to /bin/sh.
* gnu/packages/haskell.scm (ghc-6.6)[arguments]: Patch references to /bin/sh
in Cabal and process internals.
2022-10-31 19:51:36 +01:00
Denis 'GNUtoo' Carikli
eaaba9d62c
gnu: Add wipe.
* gnu/packages/disk.scm (wipe): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-10-31 11:42:25 -04:00
jgart
5da8e1e6e5
gnu: Add cl-airship-scheme.
* gnu/packages/scheme.scm (cl-airship-scheme, sbcl-airship-scheme): New
  variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-10-31 16:01:12 +01:00
jgart
2bff470920
gnu: Add cl-zr-utils.
* gnu/packages/lisp-xyz.scm (cl-zr-utils, ecl-zr-utils, sbcl-zr-utils): New
  variables.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2022-10-31 16:01:12 +01:00
Guillaume Le Vaillant
39816716c3
gnu: stumpwm: Update to 22.05-1.ff6cb73.
* gnu/packages/wm.scm (stumpwm): Update to 22.05-1.ff6cb73.
2022-10-31 16:01:12 +01:00
Guillaume Le Vaillant
1eee671d7d
gnu: sbcl: Update to 2.2.10.
* gnu/packages/lisp.scm (sbcl): Update to 2.2.10.
  [arguments]: Remove obsolete fix from 'build-doc' phase.
2022-10-31 16:01:12 +01:00
Mehmet Tekman
e90e47c00a
gnu: Add x11vnc.
* gnu/packages/vnc.scm (x11vnc): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-10-31 09:48:50 -04:00
Nicolas Goaziou
61c002930e
gnu: silkaj: Update to 0.10.0.
* gnu/packages/finance.scm (silkaj): Update to 0.10.0.
[build-system]: Use PYPROJECT-BUILD-SYSTEM.
[arguments]: Remove it.
[native-inputs]: Add PYTHON-POETRY-CORE.
[inputs]: Remove input labels. Remove PYTHON-PYNACL. Add PYTHON-PENDULUM.
[description]: Do not overemphasize project name.
2022-10-31 14:21:48 +01:00
Peter Polidoro
0f902e6a9e
gnu: kicad: Update to 6.0.8.
* gnu/packages/engineering.scm (kicad): Update to 6.0.8.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-10-31 12:57:23 +01:00
jgart
c9fb08a2b1
gnu: Add emacs-hare-mode.
* gnu/packages/emacs-xyz.scm (emacs-hare-mode): New variable.

Co-authored-by: ( <paren@disroot.org>
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-10-31 12:18:06 +01:00
Nicolas Goaziou
a618505eeb
gnu: emacs-pyim: Update to 5.2.7.
* gnu/packages/emacs-xyz.scm (emacs-pyim): Update to 5.2.7.
2022-10-31 12:18:06 +01:00
Nicolas Goaziou
2b2564c0d8
gnu: emacs-mint-mode: Remove unnecessary #:INCLUDE.
* gnu/packages/emacs-xyz.scm (emacs-mint-mode)[arguments]: Remove it.
Upstream provides no ".txt" and ".el" files are matched in %DEFAULT-INCLUDE.
2022-10-31 12:18:06 +01:00
jgart
7c25c94a27
gnu: emacs-mint-mode: Update to 2.0.0.
* gnu/packages/emacs-xyz.scm (emacs-mint-mode): Update to 2.0.0.
[description]: Update description for accuracy with current version.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-10-31 12:18:05 +01:00
Mathieu Othacehe
ab974ed709
installer: parted: Retry failing read-partition-uuid call.
Fixes: <https://issues.guix.gnu.org/53541>.

* gnu/installer/parted.scm (read-partition-uuid/retry): New procedure.
(check-user-partitions): Use it.
2022-10-31 09:34:13 +01:00
Efraim Flashner
5197b07e0e
gnu: mpv-mpris: Update to 0.9.
* gnu/packages/video.scm (mpv-mpris): Update to 0.9.
2022-10-31 08:12:44 +02:00
(unmatched-parenthesis
c3f391376b
* gnu/packages/golang.scm (notmuch-fixtures): New variable here...
(go-github-com-zenhack-go-notmuch): ...and here.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
2022-10-31 02:09:30 -04:00
Tobias Geerinckx-Rice
044985f5f9
gnu: jo: Update to 1.7.
* gnu/packages/web.scm (jo): Update to 1.7.
2022-10-23 02:00:00 +02:00
Tobias Geerinckx-Rice
128f3cf8a4
gnu: hamlib: Fix inputs.
* gnu/packages/radio.scm (hamlib)[native-inputs]: Move lua and tcl…
[inputs]: …here.  Add python.
2022-10-23 02:00:00 +02:00
Tobias Geerinckx-Rice
fad1165fdb
gnu: hamlib: Rebuild broken configure script.
* gnu/packages/radio.scm (hamlib)[native-inputs]: Add autoconf, automake, and libtool.
[arguments]: Add a new 'force-bootstrap phase.
2022-10-23 02:00:00 +02:00
Tobias Geerinckx-Rice
157db85f6d
gnu: sdrangel: Don't detect CPU extensions at build time.
* gnu/packages/radio.scm (sdrangel)[arguments]:
Add a new 'fix-CPU-extension-detection phase.
2022-10-23 02:00:00 +02:00
Christopher Baines
1f29136e25
gnu: tar: Add chained renames and Directory to hurd skipped tests.
* gnu/packages/base.scm (tar)[arguments]: Include chained renames and
Directory in the tests skipped for when building for the hurd.
2022-10-30 20:53:06 +00:00
Christopher Baines
8b8430c0ad
gnu: diffutils: Add large-subopt to XFAIL_TESTS for the hurd.
* gnu/packages/base.scm (diffutils)[arguments]: Add large-subopt to
XFAIL_TESTS for the hurd.
2022-10-30 20:52:24 +00:00
Christopher Baines
2b21d60a94
gnu: coreutils: Remove test-tls from XFAIL_TESTS for the hurd.
As this test passes.

* gnu/packages/base.scm (coreutils)[arguments]: Remove test-tls from
XFAIL_TESTS for the hurd.
2022-10-30 20:51:26 +00:00
Leo Famulari
5b87c7c1d2
gnu: linux-libre 4.9: Update to 4.9.331.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.331.
(linux-libre-4.9-pristine-source): Update hash.
2022-10-30 14:57:19 -04:00
Leo Famulari
325326f516
gnu: linux-libre 4.14: Update to 4.14.296.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.296.
(linux-libre-4.14-pristine-source): Update hash.
2022-10-30 14:57:19 -04:00
Leo Famulari
1be537bf3d
gnu: linux-libre 4.19: Update to 4.19.262.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.262.
(linux-libre-4.19-pristine-source): Update hash.
2022-10-30 14:57:19 -04:00
Leo Famulari
33bf1e1fed
gnu: linux-libre 5.4: Update to 5.4.221.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.221.
(linux-libre-5.4-pristine-source): Update hash.
2022-10-30 14:57:19 -04:00
Leo Famulari
41d24c88ec
gnu: linux-libre 5.10: Update to 5.10.152.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.152.
(linux-libre-5.10-pristine-source): Update hash.
2022-10-30 14:57:19 -04:00
Leo Famulari
78602aae4e
gnu: linux-libre 5.15: Update to 5.15.76.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.76.
(linux-libre-5.15-pristine-source): Update hash.
2022-10-30 14:57:08 -04:00
jgart
9eabe0e1fd
gnu: Add emacs-flymake-collection.
* gnu/packages/emacs-xyz.scm (emacs-flymake-collection): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-10-30 10:54:01 +01:00
Nicolas Goaziou
631105947f
gnu: emacs-plz: Remove unnecessary call to MAKE-FILE-WRITABLE.
* gnu/packages/emacs-xyz.scm (emacs-plz)[arguments]: Remove unnecessary
MAKE-FILE-WRITABLE call.
2022-10-30 10:37:01 +01:00
Michael Rohleder
5b8b38d33a
gnu: emacs-plz: Patch path to curl.
* gnu/packages/emacs-xyz.scm (emacs-plz)[arguments]: Add phase substitute-curl-path.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-10-30 10:34:57 +01:00
Nicolas Goaziou
2727cebef3
gnu: emacs-mentor: Update to 0.5.
* gnu/packages/emacs-xyz.scm (emacs-mentor): Update to 0.5.
2022-10-30 10:27:54 +01:00
Nicolas Goaziou
3684d9c119
gnu: wireshark: Update to 4.0.1.
* gnu/packages/networking.scm (wireshark): Update to 4.0.1.
2022-10-30 10:23:46 +01:00
Nicolas Goaziou
dc06ddee2e
gnu: keepassxc: Update to 2.7.4.
* gnu/packages/password-utils.scm (keepassxc): Update to 2.7.4.
2022-10-30 10:20:50 +01:00
Efraim Flashner
87727b6dcb
gnu: vim: Update to 9.0.0820.
* gnu/packages/vim.scm (vim): Update to 9.0.0820.
2022-10-30 09:57:49 +02:00
Efraim Flashner
2facc0eb37
gnu: vim: Patch another '/bin/sh' shebang.
* gnu/packages/vim.scm (vim)[arguments]: Adjust custom phase
'patch-absolute-paths to use absolute value when checking for custom
cscope command.
2022-10-30 09:57:46 +02:00
Tobias Geerinckx-Rice
63bf060138
gnu: nginx-documentation: Update to 1.23.1-2898-0b7e004b5061.
* gnu/packages/web.scm (nginx-documentation): Update to 1.23.1-2898-0b7e004b5061.
2022-10-23 02:00:27 +02:00
Tobias Geerinckx-Rice
a63f8b89cf
gnu: nginx: Update to 1.23.2.
* gnu/packages/web.scm (nginx): Update to 1.23.2.
2022-10-23 02:00:26 +02:00
Tobias Geerinckx-Rice
d03bd43f46
gnu: pgloader: Update to 3.6.9.
* gnu/packages/databases.scm (pgloader): Update to 3.6.9.
2022-10-23 02:00:26 +02:00
Tobias Geerinckx-Rice
068f1a1905
etc: systemd services shouldn't ‘RemainAfterExit’.
* etc/guix-daemon.service.in (RemainAfterExit): Don't.
* etc/guix-publish.service.in (RemainAfterExit): Likewise don't.
2022-10-23 02:00:26 +02:00
Tobias Geerinckx-Rice
0f6ec662f6
etc: Add ‘Restart=always’ to both systemd services.
* etc/guix-daemon.service.in (Restart): ‘Always’ do.
* etc/guix-publish.service.in (Restart): Likewise.
2022-10-23 02:00:25 +02:00