TakeV/guix
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
40858 commits 103 branches 35 tags 492 MiB
Commit graph

40858 commits

This branch
This branch
All branches
Author SHA1 Message Date
Ricardo Wurmus
74c2339fff
gnu: Add java-eclipse-jdt-compiler-apt. 
* gnu/packages/java.scm (java-eclipse-jdt-compiler-apt): New variable.
 2019-03-08 23:18:56 +01:00
Ricardo Wurmus
8057c9e906
gnu: Add epl2.0. 
* guix/licenses.scm (epl2.0): New variable.
 2019-03-08 23:18:01 +01:00
Ricardo Wurmus
8b6acb1f20
gnu: blast+: Update to 2.7.1. 
* gnu/packages/bioinformatics.scm (blast+): Update to 2.7.1.
[inputs]: Add lmdb.
[source]: Remove obsolete patch.
* gnu/package/patches/blast+-fix-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-03-08 23:00:07 +01:00
Ricardo Wurmus
f87dcb4d75
gnu: Add texlive-latex-pdfx. 
* gnu/packages/tex.scm (texlive-latex-pdfx): New variable.
 2019-03-08 21:49:25 +01:00
Ricardo Wurmus
cafd4d387b
gnu: Add texlive-latex-xmpincl. 
* gnu/packages/tex.scm (texlive-latex-xmpincl): New variable.
 2019-03-08 21:48:19 +01:00
Ricardo Wurmus
847768b9cc
gnu: Add translate2geda. 
* gnu/packages/engineering.scm (translate2geda): New variable.
 2019-03-08 21:45:29 +01:00
Ricardo Wurmus
a734da8675
gnu: Add rkrlv2. 
* gnu/packages/music.scm (rkrlv2): New variable.
 2019-03-08 21:02:49 +01:00
Danny Milosavljevic
eb6ef893e8
gnu: fc-host-tools: Update to 10. 
* gnu/packages/embedded.scm (fc-host-tools): Update to 10.
[arguments]<:make-flags>: Change INSTBIN to INSTALL_PREFIX.
 2019-03-08 19:33:04 +01:00
Efraim Flashner
606c198788
gnu: crawl: Find all the included headers. 
* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
change the path for some headers.
 2019-03-08 17:22:29 +02:00
Efraim Flashner
b89284407f
gnu: crawl: Don't assume system architecture. 
This allows crawl to build on non-Intel architectures.

* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
remove x86* specific CFLAGS.
 2019-03-08 17:22:29 +02:00
Efraim Flashner
fc7d6bc60d
gnu: crawl: Build with python3-wrapper. 
* gnu/packages/games.scm (crawl)[native-inputs replace python with
python-wrapper.
[arguments]: Remove custom 'patch-python phase.
 2019-03-08 17:22:26 +02:00
Ludovic Courtès
4035fcba93
channels: Do not fail when the inferior lacks 'guix repl'. 
Fixes <https://bugs.gnu.org/34637>.
Reported by Martin Flack <martin.flack@gmail.com>.

Previously we'd fail to build the package cache for old versions of Guix
that lack 'guix repl'.  Now we simply ignore the issue and keep going
without a cache.

* guix/inferior.scm (gexp->derivation-in-inferior): Add
 #:silent-failure? and honor it.
[drop-extra-keyword]: New procedure.
Use it.
* guix/channels.scm (package-cache-file): Pass #:silent-failure? #t.
 2019-03-08 12:31:38 +01:00
Ludovic Courtès
910aaa3b86
doc: Document references. 
Suggested by "pelzflorian (Florian Pelz)" <pelzflorian@pelzflorian.de>.
Fixes <https://bugs.gnu.org/34574>.

* doc/guix.texi (Derivations): Document references.
 2019-03-08 12:31:37 +01:00
Vagrant Cascadian
fb0aeaacea
gnu: u-boot: Remove openssl input. 
Fixes <https://bugs.gnu.org/34717>.

* gnu/packages/bootloaders (u-boot): Remove openssl from native-inputs.
  (u-boot-tools): Disable FIT_SIGNATURES in tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-03-08 12:31:37 +01:00
Rutger Helling
75f0bda71a
gnu: flatpak: Add more dependencies. 
* gnu/packages/package-management.scm (flatpak)[propagated-inputs]: Add
"glib-networking", "gnupg" and "gsettings-desktop-schemas".
 2019-03-08 11:50:56 +01:00
Ricardo Wurmus
daeb3cd98c
gnu: r-genelendatabase: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.
 2019-03-08 09:30:00 +01:00
Ricardo Wurmus
183b6575e7
gnu: r-mzr: Update to 2.16.2. 
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.2.
[inputs]: Replace "boost" with "boost-for-mysql".
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
6453d7aecc
gnu: r-gviz: Update to 1.26.5. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.5.
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
101dcc29d3
gnu: r-ensembldb: Update to 2.6.7. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.7.
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
d3713237c5
gnu: r-annotationhub: Update to 2.14.4. 
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.4.
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
53e7f028ed
gnu: r-rhtslib: Update to 1.14.1. 
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.1.
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
d86b9eca56
gnu: r-genomicfeatures: Update to 1.34.4. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
d493043daf
gnu: r-rtracklayer: Update to 1.42.2. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.
 2019-03-08 09:14:01 +01:00
Ricardo Wurmus
57f40dc220
gnu: r-rsamtools: Update to 1.34.1. 
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.
 2019-03-08 09:14:00 +01:00
Ricardo Wurmus
58209b1e21
gnu: r-biocparallel: Update to 1.16.6. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.
 2019-03-08 09:14:00 +01:00
Ricardo Wurmus
cd43ae3fd6
gnu: r-variantannotation: Update to 1.28.11. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.
 2019-03-08 09:14:00 +01:00
Ricardo Wurmus
fff11bccc6
gnu: r-genomeinfodb: Update to 1.18.2. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.
 2019-03-08 09:14:00 +01:00
Ricardo Wurmus
8972989e10
gnu: r-dexseq: Update to 1.28.2. 
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.
 2019-03-08 09:14:00 +01:00
Tobias Geerinckx-Rice
792d3ed7eb
gnu: man-pages: Update to 5.00. 
* gnu/packages/man.scm (man-pages): Update to 5.00.
[source]: Re-format.
 2019-03-08 01:35:42 +01:00
Tobias Geerinckx-Rice
13b1fb5c92
gnu: dovecot: Update to 2.3.5. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.5.
[arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from
‘patch-other-file-names’.
 2019-03-08 01:34:41 +01:00
Tobias Geerinckx-Rice
2fa1a3a808
gnu: dovecot: Don't use NAME in source URI. 
* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.
 2019-03-08 01:34:40 +01:00
Ricardo Wurmus
95803946c7
etc: snippets: Prefill package name. 
* etc/snippets/text-mode/guix-commit-message-add-package: Extract package
name from diff.
 2019-03-08 00:17:30 +01:00
Ricardo Wurmus
933dad9156
gnu: Add mruby. 
* gnu/packages/ruby.scm (mruby): New variable.
 2019-03-08 00:07:45 +01:00
Ricardo Wurmus
d6234620ac
etc: snippets: Prefill package name and version. 
* etc/snippets/text-mode/guix-commit-message-update-package: Extract package
name and version from git diff output.
 2019-03-07 23:55:24 +01:00
Ricardo Wurmus
20662a3020
gnu: r-ggmap: Update to 3.0.0. 
* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0.
[propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr,
r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj,
r-proto, and r-reshape2.
 2019-03-07 23:52:44 +01:00
Ricardo Wurmus
8f37f53837
gnu: r-readxl: Update to 1.3.0. 
* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.
 2019-03-07 23:52:44 +01:00
Ricardo Wurmus
f544ab3379
gnu: r-sys: Update to 3.0. 
* gnu/packages/cran.scm (r-sys): Update to 3.0.
 2019-03-07 23:52:44 +01:00
Ricardo Wurmus
790db519f4
gnu: r-servr: Update to 0.13. 
* gnu/packages/cran.scm (r-servr): Update to 0.13.
 2019-03-07 23:52:44 +01:00
Ricardo Wurmus
e89d54278d
gnu: r-flextable: Update to 0.5.1. 
* gnu/packages/cran.scm (r-flextable): Update to 0.5.1.
[propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and
r-stringr.
 2019-03-07 23:52:44 +01:00
Ricardo Wurmus
e190d9af6c
gnu: r-proxy: Update to 0.4-23. 
* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
bef78244de
gnu: r-haven: Update to 2.1.0. 
* gnu/packages/cran.scm (r-haven): Update to 2.1.0.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
59c513422c
gnu: r-emdbook: Update to 1.3.11. 
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
937e15571c
gnu: r-rmysql: Update to 0.10.17. 
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17.
[native-inputs]: Remove pkg-config.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
2170a36c3b
gnu: r-gower: Update to 0.2.0. 
* gnu/packages/cran.scm (r-gower): Update to 0.2.0.
[native-inputs]: Remove r-knitr.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
6e4a9b8365
gnu: r-ggsignif: Update to 0.5.0. 
* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
532b359865
gnu: r-jomo: Update to 2.6-7. 
* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.
 2019-03-07 23:52:43 +01:00
Ricardo Wurmus
d2cd541cc7
gnu: r-mice: Update to 3.4.0. 
* gnu/packages/cran.scm (r-mice): Update to 3.4.0.
 2019-03-07 23:52:42 +01:00
Ricardo Wurmus
22777c8657
gnu: r-xfun: Update to 0.5. 
* gnu/packages/cran.scm (r-xfun): Update to 0.5.
 2019-03-07 23:52:42 +01:00
Ricardo Wurmus
87bb1b8c9e
gnu: r-metap: Update to 1.1. 
* gnu/packages/cran.scm (r-metap): Update to 1.1.
 2019-03-07 23:52:42 +01:00
Ricardo Wurmus
d8787b3387
gnu: r-ifultools: Update to 2.0-5. 
* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.
 2019-03-07 23:52:42 +01:00