* gnu/packages/bioinformatics.scm (sambamba): Update to 0.8.2.
[arguments]: Sett CC and D_LD in build phase.
[native-inputs]: Add ld-gold-wrapper and binutils-gold.
Fixes: <https://issues.guix.gnu.org/52943>.
* tests/gremlin.scm (file-needed/recursive)[ground-truth]: On aarch64-linux,
remove the dynamic linker from this list.
* gnu/packages/python-xyz.scm (python-pydbus): New variable.
Co-authored-by: Aleksandr Vityazev <avityazev@posteo.org>
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
I noticed that pam_mount mounts work fine when loging into a textual
session, but not when using sddm. This patch fixes this problem by
ensuring that pam_mount.so is included in /etc/pam.d/sddm config file.
* gnu/services/pam-mount.scm (pam-mount-pam-service): Add sddm to the list of
pam services.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu/packages/python-xyz.scm (python-cftime): Update to 1.5.1.1.
[native-inputs]: Add python-check-manifest, python-coverage, python-sphinx,
python-twine, python-wheel.
[home-page]: Use page linked in the GitHub repository.
[license]: Change to expat according to the GitHub repository.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Fixes, for example, "guix import pypi --<TAB>", which would previously
fail to show '--recursive'.
* etc/completion/bash/guix (_guix_complete_option): Fix options
completion for first subcommand.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Fixes a regression introduced in
a773c3142d, which would lead the first
'trap' to be ignored, thereby leaving 't-guix-graph-*' directories
behind it.
* tests/guix-graph.sh: Remove first 'trap' line that had no effect;
replace second 'trap' line.
* Makefile.am (SCM_TESTS): Register new tests.
* guix/import/github.scm
(%github-api): New variable.
(fetch-releases-or-tags): Use the new variable.
* tests/import-github.scm: New file with tests.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix/import/github.scm
(latest-released-version): Also return the tag.
(latest-release): Use this information to return <git-reference> objects
when appropriate.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Fixes <https://issues.guix.gnu.org/52766>.
Reported by Michael Rohleder <mike@rohleder.de>.
* gnu/machine/ssh.scm (<machine-ssh-configuration>)[safety-checks?]: New
field.
(machine-check-file-system-availability): Return the empty list when
'safety-checks?' is false.
(machine-check-initrd-modules): Likewise.
* doc/guix.texi (Invoking guix deploy): Document it.
librsvg is already propagated by gtk+, so directly adding it to the inputs
is only going to cause unnecessary breakages.
* gnu/packages/gnome.scm (gnome-mahjongg)[inputs]: Remove librsvg.
* gnu/packages/python-xyz.scm (python-piexif): New variable.
* gnu/packages/patches/python-piexif-fix-tests-with-pillow-7.2.patch: New file.
* gnu/packages/python-xyz.scm (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (autokey): Add comments on the disabled tests
and GI_TYPELIB_PATH wrapping.
[inputs]: Add ipython.
[phases]{fix-paths}: Use paths to ipython3 and python3 in autokey-shell
script.
{wrap-autokey}: Change name to...
{wrap-autokey-gi}: ...this and move to before wrap for clarity.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* gnu/packages/emacs-xyz (emacs-consult): [propagated-inputs]:
Remove emacs-flycheck, there is currently no consult-flycheck.el
file in the consult.el repository. consult-flycheck.el is stored in
its own repository.
Remove emacs-selectrum, an optional dependency. Not required for
successful compilation.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
