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Author SHA1 Message Date
Sharlatan Hellseher f10a02bdbf
gnu: go-github-com-nbrownus-go-metrics-prometheus: Fix indentation. 
* gnu/packages/golng-xyz (go-github-com-nbrownus-go-metrics-prometheus):
Fix indentation.

Change-Id: I305e0a64fbb89ea073f30f7b91673628097fc263
 2024-03-27 23:08:24 +00:00
Sharlatan Hellseher d02579c9a1
gnu: go-github-com-miekg-dns: Fix indentation. 
* gnu/packages/golang-xyz (go-github-com-miekg-dns): Fix indentation.

Change-Id: I10f4a9e9e28dd2214e39225a26ec45a0b7f952cf
 2024-03-27 23:08:24 +00:00
Sharlatan Hellseher faf948173f
gnu: go-github-com-cyberdelia-go-metrics-graphite: Fix indentation. 
* gnu/packages/golang-xyz (go-github-com-cyberdelia-go-metrics-graphite):
Fix indentation.

Change-Id: Ia758dfd8f2ec683395eaace73617949a8ad897fe
 2024-03-27 23:08:24 +00:00
Sharlatan Hellseher c9fe935a33
gnu: go-github-com-anmitsu-go-shlex: Fix indentation. 
* gnu/packages/golang-xyz (go-github-com-anmitsu-go-shlex): Fix
indentation.

Change-Id: Ib47fbdf3a31a1442cd88ff12a9a2b6c437c283d9
 2024-03-27 23:08:24 +00:00
Sharlatan Hellseher 90ec785f21
gnu: clipman: Refresh package style. 
* gnu/packages/xdisorg.scm (clipman): Adjust indentation.
[arguments] <#:phases>: Rename 'patch to 'patch-wl-copy-path phase to
reflect the purpose. Revert default 'install-license-files phase.
[native-inputs]: Remove go-github-com-alecthomas-template and
go-github-com-alecthomas-units, they are propagated from
go-gopkg-in-alecthomas-kingpin-v2.

Change-Id: I5332906c126904ced595aa322be5f933c305c5f7
 2024-03-27 23:08:18 +00:00
Sharlatan Hellseher cf5c8c4902
gnu: clipman: Simplify package. 
* gnu/packages/xdisorg.scm (clipman):
[phases] <#:phases>: Adjust 'patch phase to relay on provided module
import path.
[inputs]: Remove go-github-com-alecthomas-kingpin; add
go-gopkg-in-alecthomas-kingpin-v2.

Change-Id: I3d9d82af29672ff94cdbd39b18ec4ed61b8e485f
 2024-03-27 23:05:15 +00:00
Sharlatan Hellseher b58717b419
gnu: go-github-com-alecthomas-kingpin: Adjust inputs. 
gnu/packages/golang-xyz.scm (go-github-com-alecthomas-kingpin)
[native-inputs]: Move go-github-com-alecthomas-units and
go-github-com-alecthomas-template from here ...
[propagated-inputs]: ... to here.

Change-Id: I841ea8cf29ef49008d7a725c9db96b963f263f7f
 2024-03-27 23:05:15 +00:00
Sharlatan Hellseher f1911e65f9
gnu: Add go-gopkg-in-alecthomas-kingpin-v2. 
* gnu/packages/golang-xyz.scm (go-gopkg-in-alecthomas-kingpin-v2): New variable.

Change-Id: I35a0919b30a191000e922882619e778187b5a0da
 2024-03-27 23:05:15 +00:00
Sharlatan Hellseher 1c3bfe42e3
gnu: Add go-github-com-alecthomas-kingpin-v2. 
* gnu/packages/golang-xyz.scm (go-github-com-alecthomas-kingpin-v2): New variable.
* gnu/packages/golang-xyz.scm (go-github-com-kingpin): Delete variable.

Change-Id: If40f318b960e29fd601602d26fd36dcc8fce9583
 2024-03-27 23:05:15 +00:00
Sharlatan Hellseher 81a417aa3e
gnu: Add go-github-com-xhit-go-str2duration-v2. 
* gnu/packages/golang-xyz.scm (go-github-com-xhit-go-str2duration-v2): New variable.

Change-Id: I30425e498db6dd8cb736eedffe006346973628ed
 2024-03-27 23:05:15 +00:00
Sharlatan Hellseher 5ad619e0dc
gnu: clipman: Update to 1.6.2. 
* gnu/packages/xdisorg.scm (clipman): Update to 1.6.2.

Change-Id: I389f93f2d43f1675f2b33694ba84711e42df4eaf
 2024-03-27 22:59:02 +00:00
Sharlatan Hellseher 7b15e5334e
gnu: clipman: Fix source and home-page URL. 
The URI https://github.com/yory8/clipman/ no longer exists. The new
project's URL was obtained from the Nix package.

* gnu/packages/xdisorg.scm (clipman) [source]: Fix URL.
[home-page]: As above.

Change-Id: I20e9f22780586ce14d925d5cf106e70de8209e1e
 2024-03-27 22:59:02 +00:00
Sharlatan Hellseher dfd5b96459
gnu: go-github-com-alecthomas-units: Move to golang-xyz. 
* gnu/packages/golang.scm (go-github-com-alecthomas-units): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

* gnu/packages/xdisorg.scm: Remove (gnu packages golang).

Change-Id: I9a4d7da82c9ca1b3c4e0d07d97d8fcde30590e33
 2024-03-27 22:58:44 +00:00
Sharlatan Hellseher d2dcd4c7e1
gnu: go-github-com-alecthomas-template: Move to golang-xyz. 
* gnu/packages/golang.scm (go-github-com-alecthomas-template): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: Iffdd88439819c526cd6dd940192bf48995bf76bc
 2024-03-27 21:33:42 +00:00
Sharlatan Hellseher 2173e4a12e
gnu: go-github-com-alecthomas-kingpin: Move to golang-xyz. 
* gnu/packages/golang.scm (go-github-com-alecthomas-kingpin): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: Ib7609a82c96683809f81479f4eb13f43d85d4a2f
 2024-03-27 21:33:28 +00:00
Sharlatan Hellseher f427ec7026
gnu: go-github-com-kballard-go-shellquote: Move to golang-xyz. 
* gnu/packages/syncthing.scm (go-github-com-kballard-go-shellquote):
Move from here ...
* gnu/packages/golang-xyz.scm: ... to here.

* gnu/packages/xdisorg.scm: Remove (gnu packages syncthing).
Add (gnu packages golang-xyz).

Change-Id: I3ab4cbc55d8ca0ad8b7fec0130bdb935039f2841
 2024-03-27 21:31:58 +00:00
Ricardo Wurmus c2c1098585
gnu: Add r-ggmosaic. 
* gnu/packages/cran.scm (r-ggmosaic): New variable.

Change-Id: Ia399265c01a57074b0cfc29dde45e1900ccc26de
 2024-03-27 17:50:57 +01:00
Ricardo Wurmus ca9d4d9448
gnu: Add r-productplots. 
* gnu/packages/cran.scm (r-productplots): New variable.

Change-Id: I4b8105773e11791e57d6461e8c2b6c65ffc6c6a2
 2024-03-27 17:50:57 +01:00
Marco Rimoldi 517c13624a
gnu: python-mysqlclient: Update to 2.2.4. 
* gnu/packages/databases.scm (python-mysqlclient): Update to 2.2.4.
[arguments]<#:phases>: Remove 'fix-test phase.
[native-inputs]: Add pkg-config.

Change-Id: I57a0b84eb0d56f9cea619b226090cc1ccd84812b
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 23:17:10 +08:00
Marco Rimoldi 5a41d4a56d
gnu: python-mysqlclient: Enable selected tests. 
* gnu/packages/databases.scm (python-mysqlclient)
[build-system]: Change to pyproject-build-system.
[arguments]
<#:phases>: Add 'fix-test phase.
<#:test-flags>: Specify tests to run.
[native-inputs]: Add python-pytest.
[inputs]: Replace mariadb:dev with mariadb-connector-c.
[home-page]: Update.

Change-Id: I5ae0873155f9a7cc90a318762b77864665fadc01
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 23:16:45 +08:00
Efraim Flashner 85e457a417
gnu: libtommath: Update to 1.3.0. 
* gnu/packages/multiprecision.scm (libtommath): Update to 1.3.0.

Change-Id: If0b4758abb634f4e7564d90e8a5534ebdf6579a6
 2024-03-27 17:05:49 +02:00
Jason Darby 0b38c9401b
home: services: bash: Reorder aliases. 
Reported in <https://issues.guix.gnu.org/67652>.

* home/services/shells.scm (add-bash-configuration): Reorder aliases.

Change-Id: I288856bb6befe378ca60ef78578acc069cb18532
Reported-by: Atte Torri <atte.torri@universite-paris-saclay.fr>
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 22:25:19 +08:00
Nicolas Graves b5e359eb07
gnu: Add tree-sitter-matlab. 
* gnu/packages/tree-sitter.scm (tree-sitter-matlab): New variable.

Change-Id: I5a72d20e18ed370852b9a6d3037d94675aad8c4b
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 22:24:04 +08:00
Paul A. Patience cd82bf824e
gnu: Add tree-sitter-ungrammar. 
* gnu/packages/tree-sitter.scm (tree-sitter-ungrammar): New variable.

Change-Id: I162e1ffe692aaf0b81080e4df239bba10da477ed
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 22:23:58 +08:00
Paul A. Patience 424b81c745
gnu: Add tree-sitter-ron. 
* gnu/packages/tree-sitter.scm (tree-sitter-ron): New variable.

Change-Id: I26abfa4a298b23a14bcea852c2974e694daddecd
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 22:23:53 +08:00
Paul A. Patience a4573ee607
gnu: Add tree-sitter-hcl. 
* gnu/packages/tree-sitter.scm (tree-sitter-hcl): New variable.

Change-Id: I2522cf5cc30b313c16636821deed2752ea65b43e
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 22:23:48 +08:00
Paul A. Patience 6881f090cf
gnu: Add tree-sitter-kdl. 
* gnu/packages/tree-sitter.scm (tree-sitter-kdl): New variable.

Change-Id: I40a9d9629e29d1682999d9787d4092775be23c19
Signed-off-by: Hilton Chain <hako@ultrarare.space>
 2024-03-27 22:23:43 +08:00
Hilton Chain 7995816ec4
linux-modules: Ignore nonexistent module files on boot. 
This is a follow-up to 8f8ec56052, which only
covers building initrd, while the booting code still tries to load nonexistent
files for builtin modules.

* gnu/build/linux-modules.scm (load-linux-modules-from-directory): Ignore
nonexistent module files.

Change-Id: I09ef207e82397e915e671c8464b92bcf90f03dcf
 2024-03-27 22:23:38 +08:00
nafkhamdc 3feb8f7f02
gnu: Add python-icecream. 
* gnu/packages/python-xyz.scm (python-icecream): New variable.

Change-Id: I866d0ce591a1b81fdd7e0ee706cb8e9791e70c49
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2024-03-27 15:10:15 +01:00
nafkhamdc 64db5d6de3
gnu: Add python-pytest-relaxed. 
* gnu/packages/check.scm (python-pytest-relaxed): New variable.

Change-Id: I9c506fe6a6586c87d72775a0567fd3c45ba03568
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2024-03-27 15:06:54 +01:00
Ricardo Wurmus a223b1e52b
gnu: r-bionero: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.10.2.

Change-Id: I419476f683156fa612b35680c5de3f8044851439
 2024-03-27 14:20:57 +01:00
Ricardo Wurmus af70b1d39c
gnu: r-flowworkspace: Update to 4.14.3. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.3.

Change-Id: I2a717e99d7b71df0c3774ad235e0fe87f5b2aa19
 2024-03-27 14:20:57 +01:00
Ricardo Wurmus 9c85ed3f54
gnu: r-rprotobuflib: Update to 2.14.1. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.14.1.

Change-Id: I10d2e5f7d7e55039085c51592b2046a340810a0a
 2024-03-27 14:20:57 +01:00
Ricardo Wurmus 6506d63865
gnu: r-flowcore: Update to 2.14.2. 
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.14.2.

Change-Id: I61158d6b9243c4386149364ef0d36a0d1bd5e4b8
 2024-03-27 14:20:57 +01:00
Ricardo Wurmus 684271cede
gnu: r-trackviewer: Update to 1.38.2. 
* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.2.

Change-Id: I1b26ba59abbba23d8215a16fdf9bbb7e49e54260
 2024-03-27 14:20:57 +01:00
Ricardo Wurmus 782b7509d3
gnu: r-dittoseq: Update to 1.14.3. 
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.14.3.

Change-Id: I85f76e70f0b275749d622dad28346c0912e09b57
 2024-03-27 14:20:57 +01:00
Ricardo Wurmus f443c6d192
gnu: r-diffcyt: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.22.1.

Change-Id: Id1d88a4a660908c949107ffaf3ec33e5d69bff11
 2024-03-27 14:20:56 +01:00
Ricardo Wurmus 8cbdeb44a9
gnu: r-hdcytodata: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-hdcytodata): Update to 1.22.1.

Change-Id: I7c159709261c7862a171aac14962b4b18cf1459f
 2024-03-27 14:20:56 +01:00
Ricardo Wurmus 656baadf83
gnu: r-rstudioapi: Update to 0.16.0. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.16.0.

Change-Id: I587b1c0a7ba302ba158cc8c40d1bf3477a106d8a
 2024-03-27 13:49:45 +01:00
Ricardo Wurmus da071b8682
gnu: r-dbplyr: Update to 2.5.0. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.5.0.

Change-Id: I14e5c4a551dc8311d6ee563763a4cd0d0d136c55
 2024-03-27 13:49:45 +01:00
Ricardo Wurmus d341a9c5ec
gnu: r-lattice: Update to 0.22-6. 
* gnu/packages/statistics.scm (r-lattice): Update to 0.22-6.

Change-Id: I7f273c9264eaddae45bb7d44ee2dbff99546cd91
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus b931ad2102
gnu: r-maxlik: Update to 1.5-2.1. 
* gnu/packages/cran.scm (r-maxlik): Update to 1.5-2.1.

Change-Id: Iaa44b650388003bbefe20b8d54874475a9d86104
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus cebed8db36
gnu: r-mlr3pipelines: Update to 0.5.1. 
* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.5.1.

Change-Id: Ie59fd68968bf930d60b7740b6d3e07e2d786e5df
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus 2dfb802b35
gnu: r-tidymodels: Update to 1.2.0. 
* gnu/packages/cran.scm (r-tidymodels): Update to 1.2.0.

Change-Id: Ic806e59987525dbed0f5fa174863a88c236d9c4d
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus b0c2ea8562
gnu: r-infer: Update to 1.0.7. 
* gnu/packages/cran.scm (r-infer): Update to 1.0.7.
[propagated-inputs]: Add r-lifecycle.

Change-Id: I749a723ea02dac13f9d441622dde03b04c5b8bbd
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus 8e9ce7552e
gnu: r-parsnip: Update to 1.2.1. 
* gnu/packages/cran.scm (r-parsnip): Update to 1.2.1.

Change-Id: I16f45c41a20f472aac34f6879c487d81f6fd1203
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus 33b3d7b404
gnu: r-tune: Update to 1.2.0. 
* gnu/packages/cran.scm (r-tune): Update to 1.2.0.
[propagated-inputs]: Add r-dofuture and r-future.

Change-Id: I21cf291720b57744ddced96bbbb70baeebf2f109
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus 80ac0fe4ff
gnu: r-rsample: Update to 1.2.1. 
* gnu/packages/cran.scm (r-rsample): Update to 1.2.1.

Change-Id: If01f092f1fe8c97aa19c47a3341c43d1e9a2d40a
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus 7b5074930e
gnu: r-yardstick: Update to 1.3.1. 
* gnu/packages/cran.scm (r-yardstick): Update to 1.3.1.

Change-Id: I7b3dd4259a33464f79d894b3c8105b62c8899324
 2024-03-27 13:49:44 +01:00
Ricardo Wurmus 13bfcf9d6b
gnu: r-spatstat: Update to 3.0-8. 
* gnu/packages/cran.scm (r-spatstat): Update to 3.0-8.

Change-Id: I885f9707f1c442e2b1f1667792b33e665ecfa809
 2024-03-27 13:49:44 +01:00