Commit graph

117291 commits

Author SHA1 Message Date
Ricardo Wurmus 1f0633db11
gnu: r-annotationforge: Update to 1.42.2.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.42.2.
2023-07-12 14:29:10 +02:00
Ricardo Wurmus c397d6a5e1
gnu: r-genomeinfodb: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.1.
2023-07-12 14:29:10 +02:00
Ricardo Wurmus 3c201e1aab
gnu: r-annotationdbi: Update to 1.62.2.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.2.
2023-07-12 14:29:10 +02:00
Ricardo Wurmus 565d84170a
gnu: r-affy: Update to 1.78.1.
* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.1.
2023-07-12 14:29:10 +02:00
Ricardo Wurmus a9d140996c
gnu: r-isoformswitchanalyzer: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 2.0.1.
[propagated-inputs]: Remove r-drimseq; add r-biocparallel, r-pfamanalyzer, r-s4vectors,
r-saturn, r-summarizedexperiment, r-sva, and r-tidyr.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus b864a5956f
gnu: r-iranges: Update to 2.34.1.
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.34.1.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 5eaf9f6b83
gnu: r-delayedarray: Update to 0.26.6.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.6.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 6e83dee12a
gnu: r-bambu: Update to 3.2.5.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.5.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus f0c82ddced
gnu: r-alevinqc: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.16.1.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 4db85c197b
gnu: r-ancombc: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.1.
[propagated-inputs]: Remove r-dplyr, r-emmeans, r-magrittr, r-rlang, r-rngtools,
r-tibble, and r-tidyr; add r-gtools, r-matrix, and r-multcomp.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 558637533f
gnu: r-gdsfmt: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.1.
[properties]: Tell updater to leave the extra inputs be.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus b4cafa71ae
gnu: Add r-saturn.
* gnu/packages/bioconductor.scm (r-saturn): New variable.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 990bac0ea5
gnu: Add r-pfamanalyzer.
* gnu/packages/bioconductor.scm (r-pfamanalyzer): New variable.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus b10bff65be
gnu: r-mzr: Update to 2.34.1.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.34.1.
[properties]: Tell updater to not remove the "boost" input.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus ee50cae529
gnu: r-norm: Update to 1.0-11.1.
* gnu/packages/statistics.scm (r-norm): Update to 1.0-11.1.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus c141725c65
gnu: r-logspline: Update to 2.1.20.
* gnu/packages/statistics.scm (r-logspline): Update to 2.1.20.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 5a1c16fa18
gnu: r-pbapply: Update to 1.7-2.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.7-2.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 42c29d9d22
gnu: r-robust: Update to 0.7-2.
* gnu/packages/statistics.scm (r-robust): Update to 0.7-2.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 2108aa1975
gnu: r-rrcov: Update to 1.7-4.
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-4.
2023-07-12 14:29:09 +02:00
Ricardo Wurmus 387c1fafce
gnu: r-robustbase: Update to 0.99-0.
* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-0.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 86c7032abf
gnu: r-deoptimr: Update to 1.0-14.
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-14.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus f9dc378cb4
gnu: r-mvtnorm: Update to 1.2-2.
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-2.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus e8ef13993e
gnu: r-rmarkdown: Update to 2.23.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.23.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 7cb71cb2fb
gnu: r-rcpparmadillo: Update to 0.12.4.1.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.4.1.0.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus b8112b4600
gnu: r-rstudioapi: Update to 0.15.0.
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.15.0.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus c5c0f85b77
gnu: r-xml2: Update to 1.3.5.
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.5.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 4ec94fe0a9
gnu: r-locfit: Update to 1.5-9.8.
* gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.8.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 1493844a1e
gnu: r-dbplyr: Update to 2.3.3.
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.3.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 6276fbb64a
gnu: r-testthat: Update to 3.1.10.
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.10.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus b372435930
gnu: r-matrix: Update to 1.6-0.
* gnu/packages/statistics.scm (r-matrix): Update to 1.6-0.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus f072cd9486
gnu: r-kernsmooth: Update to 2.23-22.
* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-22.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 42b5758b82
gnu: r-paws: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws): Update to 0.3.0.
2023-07-12 14:29:08 +02:00
Ricardo Wurmus 5933aadf2f
gnu: r-paws-compute: Update to 0.3.1.
* gnu/packages/cran.scm (r-paws-compute): Update to 0.3.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus c7d49778e2
gnu: r-paws-storage: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-storage): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 39302d72b8
gnu: r-paws-database: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-database): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 6df06f6712
gnu: r-paws-networking: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-networking): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 5e436baab7
gnu: r-paws-management: Update to 0.3.1.
* gnu/packages/cran.scm (r-paws-management): Update to 0.3.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 969d35e169
gnu: r-paws-machine-learning: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-machine-learning): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 9ac7524dd4
gnu: r-paws-analytics: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-analytics): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 885c7b0b3c
gnu: r-paws-security-identity: Update to 0.3.1.
* gnu/packages/cran.scm (r-paws-security-identity): Update to 0.3.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus f85b362b81
gnu: r-paws-application-integration: Update to 0.3.1.
* gnu/packages/cran.scm (r-paws-application-integration): Update to 0.3.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 688e22f4b7
gnu: r-paws-end-user-computing: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-end-user-computing): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 52312a4551
gnu: r-paws-developer-tools: Update to 0.3.1.
* gnu/packages/cran.scm (r-paws-developer-tools): Update to 0.3.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 17148282b6
gnu: r-paws-cost-management: Update to 0.3.1.
* gnu/packages/cran.scm (r-paws-cost-management): Update to 0.3.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus a656a07e37
gnu: r-paws-customer-engagement: Update to 0.3.0.
* gnu/packages/cran.scm (r-paws-customer-engagement): Update to 0.3.0.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 8302b17bff
gnu: r-paws-common: Update to 0.5.8.
* gnu/packages/cran.scm (r-paws-common): Update to 0.5.8.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 432ffdb433
gnu: r-delaporte: Update to 8.1.1.
* gnu/packages/cran.scm (r-delaporte): Update to 8.1.1.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 6945b8502a
gnu: r-intervals: Update to 0.15.4.
* gnu/packages/cran.scm (r-intervals): Update to 0.15.4.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 24177b718f
gnu: r-readtext: Update to 0.90.
* gnu/packages/cran.scm (r-readtext): Update to 0.90.
2023-07-12 14:29:07 +02:00
Ricardo Wurmus 7ecefb14dd
gnu: r-downlit: Update to 0.4.3.
* gnu/packages/cran.scm (r-downlit): Update to 0.4.3.
2023-07-12 14:29:07 +02:00