Commit graph

79370 commits

Author SHA1 Message Date
Ricardo Wurmus
2aad8aa075
gnu: r-a4core: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
387c023105
gnu: r-annaffy: Update to 1.63.1.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.63.1.
[propagated-inputs]: Add r-biocmanager.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
ad3b03d6ad
gnu: r-mlinterfaces: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.72.0.
[propagated-inputs]: Add r-magrittr.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2a7532cca8
gnu: r-clusterexperiment: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-clusterexperiment): Update to 2.12.0.
[propagated-inputs]: Remove r-rspectra; add r-biocsingular.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2b4c784b2b
gnu: r-clusterprofiler: Update to 4.0.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
8b0dc8e39c
gnu: r-enrichplot: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.0.
[propagated-inputs]: Add r-ggtree.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
ca136dd70a
gnu: r-dose: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
c8bec0d962
gnu: r-fgsea: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.18.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
1bfe5c274f
gnu: r-sigpathway: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.60.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
dda291540b
gnu: r-anota: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.40.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
376d9dd825
gnu: r-gosemsim: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.18.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
faf60162a3
gnu: r-heatplus: Update to 3.0.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 3.0.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
1ade726fdf
gnu: r-varianttools: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.34.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
2c5bba1392
gnu: r-tradeseq: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-tradeseq): Update to 1.6.0.
[propagated-inputs]: Remove r-clusterexperiment and r-dplyr; add r-matrix, r-matrixstats,
and r-viridis.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
0c35cde14f
gnu: r-ioniser: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.16.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
ac150da152
gnu: r-linnorm: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.16.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
f1635d65e7
gnu: r-lumi: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.44.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
973d33484b
gnu: r-methylumi: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.38.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
a387e1d89c
gnu: r-minfi: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.38.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
136adea01b
gnu: r-bumphunter: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.34.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
18c81e5615
gnu: r-siggenes: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.66.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
7e29fb98e1
gnu: r-illuminaio: Update to 0.34.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.34.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
23d3d7af06
gnu: r-geoquery: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.60.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
6db7802b5b
gnu: r-scone: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.16.0.
[propagated-inputs]: Add r-matrixgenerics and r-singlecellexperiment.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
611024367b
gnu: r-scdd: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.16.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
d7390d7c63
gnu: r-noiseq: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.36.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
716ac28a58
gnu: r-monocle: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.20.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
12ec22ca50
gnu: r-mast: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.18.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
79928c5e58
gnu: r-icobra: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.20.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
2ed5a0844e
gnu: r-ihw: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.20.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
0c15284ad0
gnu: r-lpsymphony: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.20.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
c63c44190d
gnu: r-karyoploter: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.18.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
9a67123210
gnu: r-ebseq: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.32.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
729f6adcf4
gnu: r-dnacopy: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.66.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
ac27feed69
gnu: r-copynumber: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.32.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
749cf40ecc
gnu: r-chipexoqual: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.16.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
a10f236ca3
gnu: r-savr: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.30.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
8aef574b84
gnu: r-biocsingular: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.8.0.
[propagated-inputs]: Add r-scaledmatrix.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
f5ae14832c
gnu: r-biocneighbors: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.10.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
618f98c022
gnu: r-ruvseq: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.26.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
cac2839447
gnu: r-dnabarcodes: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.22.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
c6078d915d
gnu: r-inspect: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.22.0.
2021-06-05 09:12:47 +02:00
Ricardo Wurmus
79c1e0335f
gnu: r-plgem: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.64.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
481c3222e6
gnu: r-rots: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.20.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
089f64657b
gnu: r-glimma: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.2.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
4485bc7183
gnu: r-goseq: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.44.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
87d6e68015
gnu: r-ctc: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.66.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
675f1a9144
gnu: r-genomicinteractions: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.26.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
ba7757cf1f
gnu: r-interactionset: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.20.0.
2021-06-05 09:12:46 +02:00
Ricardo Wurmus
43a0a48a69
gnu: r-riboseqr: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.26.0.
2021-06-05 09:12:46 +02:00