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Author SHA1 Message Date
Ricardo Wurmus
44599e7966
gnu: r-rhdf5filters: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.10.1.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
4afcef7847
gnu: r-biomart: Update to 2.54.1. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.54.1.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
91c41b8ce7
gnu: r-annotationforge: Update to 1.40.2. 
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.40.2.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
473bd926cf
gnu: r-anvil: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.10.2.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
2c3383e8d8
gnu: r-amaretto: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.14.0.
 2023-03-31 15:25:24 +02:00
Maxim Cournoyer
d80c5b936d
gnu: python-geventhttpclient: Update to 2.0.9. 
* gnu/packages/python-web.scm (python-geventhttpclient): Update to 2.0.9.
[propagated-inputs]: Add python-urllib3.
[home-page]: Update URL.
 2023-03-31 09:01:38 -04:00
Danny Milosavljevic
56de91b712
gnu: Add fbautostart. 
* gnu/packages/wm.scm (fbautostart): New variable.
 2023-03-31 14:45:27 +02:00
Maxim Cournoyer
9eafe47e39
gnu: ruby-activesupport: Skip a failing test on i686-linux. 
* gnu/packages/rails.scm (ruby-activesupport)
[arguments]: Skip the test_iso8601_output_and_reparsing test when building for
i686-linux.
 2023-03-31 08:35:01 -04:00
c4droid
1c6238794b
gnu: Add emu8051. 
* gnu/packages/emulators.scm (emu8051): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2023-03-31 19:31:47 +08:00
ivan-p-sokolov@ya.ru
a368e3cf6b
gnu: Add tree-sitter-heex. 
gnu/packages/tree-sitter.scm (tree-sitter-heex): New variable.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-03-31 08:10:29 +04:00
Maxim Cournoyer
4876226dd5
gnu: go: Update home page URL. 
* gnu/packages/golang.scm (go-1.4) [home-page]: Update URL.
 2023-03-30 23:55:21 -04:00
Giacomo Leidi
1ce3acd778
gnu: python-coverage: Update to 5.5. 
* gnu/packages/check.scm (python-coverage): Update to 5.5.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:55:20 -04:00
宋文武
28abb9e7d2
gnu: sdl2: Update to 2.26.2. 
* gnu/packages/sdl.scm (sdl2): Update to 2.26.2.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:55:03 -04:00
Vivien Kraus
e994428066
gnu: ucd: Update to 15.0.0. 
* gnu/packages/unicode.scm (ucd): Update to 15.0.0.
 2023-03-30 23:31:54 -04:00
Maxim Cournoyer
d2f1b1d08b
gnu: Remove ucd-next. 
* gnu/packages/build-tools.scm (ucd-next): Delete variable.
 2023-03-30 23:31:20 -04:00
Hilton Chain
50131780df
gnu: go-1.17: Update to 1.17.13. 
* gnu/packages/golang.scm (go-1.17): Update to 1.17.13.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:27:26 -04:00
Maxim Cournoyer
3fa69a8d5d
gnu: hdf5-1.8: Delete trailing #t. 
* gnu/packages/maths.scm (hdf5-1.8) [arguments]: Delete trailing #t.
 2023-03-30 23:20:21 -04:00
Greg Hogan
8af64f3963
gnu: Add hdf5@1.14. 
* gnu/packages/maths.scm (hdf5-1.14): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:15:13 -04:00
Greg Hogan
cca7f2d7ae
gnu: hdf5@1.12: Update to 1.12.2. 
* gnu/packages/maths.scm (hdf5-1.12): Update to 1.12.2.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:15:13 -04:00
Greg Hogan
2df9cf44b1
gnu: hdf5@1.10: Update to 1.10.9. 
* gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.9.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:15:13 -04:00
Greg Hogan
895de955ae
gnu: hdf5@1.8: Update to 1.8.23. 
* gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.23.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 23:14:22 -04:00
Leo Famulari
e914ae1571
gnu: linux-libre 5.15: Update to 5.15.105. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.105.
(linux-libre-5.15-pristine-source): Update hash.
 2023-03-30 23:09:25 -04:00
Leo Famulari
3967426686
gnu: linux-libre 6.1: Update to 6.1.22. 
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.22.
(linux-libre-6.1-pristine-source): Update hash.
 2023-03-30 23:09:25 -04:00
Leo Famulari
efcaa0d710
gnu: linux-libre: Update to 6.2.9. 
* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.9.
(linux-libre-6.2-pristine-source): Update hash.
 2023-03-30 23:09:25 -04:00
Maxim Cournoyer
4f49d03149
Revert "gnu: subversion: Tentatively reinstate parallel tests." 
This reverts commit 54ee868cbe.
 2023-03-30 23:06:52 -04:00
Maxim Cournoyer
d4683547e8
gnu: ruby-pg: Update to 1.4.6. 
* gnu/packages/ruby.scm (ruby-pg): Update to 1.4.6.
 2023-03-30 21:49:51 -04:00
Jonathan Brielmaier
cb0ae06d76
gnu: icedove: Update to 102.9.1 [fixes CVE-2023-28427]. 
* gnu/packages/gnuzilla.scm (%icedove-version): Update to 102.9.1.
(%icedove-build-id, thunderbird-comm-l10n): Update accordingly.
 2023-03-31 00:45:47 +02:00
Maxim Cournoyer
68b3e927c7
gnu: ruby-puma: Disable a flaky test. 
* gnu/packages/ruby.scm (ruby-puma) [arguments]: Disable the
hot_restart_does_not_drop_connections tests, which fail non-deterministically.
 2023-03-30 17:36:00 -04:00
Maxim Cournoyer
3b7ed50771
ruby: ruby-nokogiri: Update issue URL in comment. 
* gnu/packages/ruby.scm (ruby-nokogiri) [arguments]: Update issue URL in
delete-mkmf.log phase.
 2023-03-30 17:19:27 -04:00
Maxim Cournoyer
4817758655
gnu: ruby-puma: Do not install mkmf.log file. 
* gnu/packages/ruby.scm (ruby-puma) [arguments]: Add delete-mkmf.log phase.
 2023-03-30 17:18:39 -04:00
Timo Wilken
e7558d1647
gnu: Add zsh-completions 
* gnu/packages/shellutils.scm (zsh-completions): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:17 +02:00
Timo Wilken
8c76eb6168
gnu: Add zsh-history-substring-search 
* gnu/packages/shellutils.scm (zsh-history-substring-search): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:17 +02:00
Bruno Victal
6d0ad93020
services: pam-limits-service-type: Deprecate file-like object support in favour for lists as service value. 
* doc/guix.texi (Base Services): Document it.
* gnu/local.mk: Register test.
* gnu/services/base.scm (pam-limits-service-type): Accept both lists and
file-like objects. Deprecate file-like object support.
* gnu/tests/pam.scm: New file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Bruno Victal
ed50531885
services: base: Deprecate 'pam-limits-service' procedure. 
* doc/guix.texi (Base Services): Replace pam-limits-service with pam-limits-service-type.
* gnu/packages/benchmark.scm (python-locust)[description]: Update index anchor to manual.
* gnu/services/base.scm (pam-limits-service-type): Set default value.
(pam-limits-service): Deprecate procedure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Bruno Victal
59878230f4
system: Remove obsolete GUIX_LOCPATH workaround. 
* gnu/system.scm (operating-system-environment-variables): Do not set GUIX_LOCPATH.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Nicolas Graves
1984d56b0e
gnu: Add scilab. 
* gnu/packages/maths.scm (scilab): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Nicolas Graves
13b2d110ee
gnu: Add suitesparse-3. 
* gnu/packages/maths.scm (suitesparse-3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Nicolas Graves
f4d7b901db
gnu: matio: Add header file. 
* gnu/packages/maths.scm (matio):
  [arguments] (phases): Add phase install-matioConfig.h.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Maxim Cournoyer
e457f01a31
gnu: ruby-puma: Update to 6.2.0. 
* gnu/packages/ruby.scm (ruby-puma): Update to 6.2.0.
 2023-03-30 17:08:18 -04:00
Ricardo Wurmus
42b938ae8c
gnu: Add audmes. 
* gnu/packages/engineering.scm (audmes): New variable.
 2023-03-30 22:40:09 +02:00
Bruno Victal
1369f5df80
gnu: perl-io-socket-ssl: Update to 2.081. 
* gnu/packages/web.scm (perl-io-socket-ssl): Update to 2.081.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-03-30 16:39:32 -04:00
Maxim Cournoyer
be5e280e5f
Revert "gnu: network-manager: Update to 1.43.4." 
This reverts commit 01984774a2.  It is
apparently a development snapshot, and while working great for the most part, it
caused issues with WPA2 Enterprise WiFi configuration in
nm-connection-editor (see: https://issues.guix.gnu.org/62496).

Reported-by: John Kehayias <john.kehayias@protonmail.com>
 2023-03-30 15:57:14 -04:00
Maxim Cournoyer
7ceedc7df7
gnu: conan: Update to 2.0.2. 
* gnu/packages/package-management.scm (conan): Update to 2.0.2.
[arguments]: Delete relax-requirements phase.  Update patch-paths phase.
Add new patch-hard-coded-GCC-references, use-current-cmake-for-tests and
configure-tests phases.  Update check phase.
[native-inputs]: Replace autoconf with autoconf-wrapper.  Add libtool.
 2023-03-30 15:57:14 -04:00
Maxim Cournoyer
57c3662ddd
gnu: conan: Use gexps and remove input labels. 
* gnu/packages/package-management.scm (conan) [arguments]: Use gexps.  Use
search-input-file in patch-paths phase.
[native-inputs]: Remove labels.
 2023-03-30 15:57:14 -04:00
Ricardo Wurmus
113146d31c
gnu: r-mumin: Update to 1.47.5. 
* gnu/packages/statistics.scm (r-mumin): Update to 1.47.5.
[propagated-inputs]: Add r-insight.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
c029bac121
gnu: r-tclust: Update to 1.5-4. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.5-4.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
aadc68f297
gnu: r-car: Update to 3.1-2. 
* gnu/packages/statistics.scm (r-car): Update to 3.1-2.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
25e67fdc4f
gnu: r-robustbase: Update to 0.95-1. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.95-1.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
8a69976f6c
gnu: r-hexbin: Update to 1.28.3. 
* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.3.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
042dc3b65d
gnu: r-glmnet: Update to 4.1-7. 
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1-7.
 2023-03-30 19:21:08 +02:00