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Author SHA1 Message Date
Jelle Licht
f3cd70ff8c
gnu: node-lts: Update to 14.18.1 [security fixes]. 
* gnu/packages/node.scm (node-lts): Update to 14.18.1.
[native-inputs]: Replace c-ares with c-ares-for-node.
[inputs]: Replace c-ares with c-ares-for-node.

Includes fixes for CVE-2021-22918, CVE-2021-22930, CVE-2021-22931,
CVE-2021-22939, and CVE-2021-22940.
 2021-11-15 22:43:24 +01:00
Jelle Licht
cae7c3f389
gnu: llhttp-bootstrap: Update to 2.1.4 [security-fixes]. 
* gnu/packages/node.scm (llhttp-bootstrap): Update to 2.1.4.

Includes fixes for CVE-2021-22959 and CVE-2021-22960.
 2021-11-15 22:43:23 +01:00
Jelle Licht
ecbf59abad
gnu: Add c-ares-for-node. 
* gnu/packages/adns.scm (c-ares-for-node): New variable.

Co-authored-by: Marius Bakke <marius@gnu.org>
 2021-11-15 22:43:23 +01:00
Jelle Licht
a69076e792
gnu: node: Add cpe-name. 
* gnu/packages/node.scm (node)[properties]: Add cpe-name.
 2021-11-15 22:43:23 +01:00
Lenny Händler
847f2ae859
gnu: taskwarrior: Update to 2.6.1. 
* gnu/packages/task-management.scm (taskwarrior): Update to 2.6.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 22:26:50 +01:00
Nicolas Goaziou
ae14076578
gnu: emacs-helm: Update to 3.8.1. 
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.8.1.
 2021-11-15 21:43:39 +01:00
Nicolas Goaziou
1a925d3af7
gnu: pdfarranger: Update to 1.8.0. 
* gnu/packages/pdf.scm (pdfarranger): Update to 1.8.0.
 2021-11-15 21:41:26 +01:00
Jean-Baptiste Volatier
a1a7e2b951
gnu: julia: Fix llvm-julia version. 
LLVM bundled in the binary julia distributed by upstream has its
version with a "jl" suffix. The llvm-julia package does not have
this suffix, which causes some packages (e. g. LLVM.jl) to fail to
load.

LLVM.jl does this in order to be sure that it is loading a LLVM as
patched for julia and not LLVM from the distribution which will
lack the correct patches on distribs other than GUIX.

I guess there might be other packages that rely on this, so we
should fix our llvm-julia package.

* gnu/packages/julia.scm (llvm)
[source]: Add missing upstream patch
[arguments]: Add configure-flag to set a "jl" suffix to llvm version
(julia)[arguments]: Symlink llvm to llvm-11jl.so

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-15 22:38:09 +02:00
Nicolas Goaziou
2b56e477f3
gnu: emacs-consult: Update to 0.13. 
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.13.
 2021-11-15 21:35:33 +01:00
Nicolas Goaziou
9784e14817
gnu: emacs-exwm: Update to 0.26. 
* gnu/packages/emacs-xyz.scm (emacs-exwm): Update to 0.26.
 2021-11-15 21:33:51 +01:00
Nicolas Goaziou
d24333c29c
gnu: emacs-rustic: Update to 2.1. 
* gnu/packages/emacs-xyz.scm (emacs-rustic): Update to 2.1.
 2021-11-15 21:31:38 +01:00
Nicolas Goaziou
563354db48
gnu: emacs-marginalia: Update to 0.10. 
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.10.
 2021-11-15 21:29:47 +01:00
Nicolas Goaziou
fb8e5f530e
gnu: borgmatic: Fix typo in description. 
* gnu/packages/backup.scm (borgmatic): Fix typo, "software" being a mass noun.
 2021-11-15 21:17:21 +01:00
Ludovic Courtès
21332f3b8c
gnu: hpcguix-web: Update to 0.2.0. 
* gnu/packages/web.scm (hpcguix-web): Update to 0.2.0.
[arguments]: In 'wrap-program' phase, add guile-zlib to DEPS.
[native-inputs]: Add GUILE.
[inputs]: Add GUILE-ZLIB, GUILE-COMMONMARK, and GUILE-JSON.
[propagated-inputs]: Remove.  These were pointless.
* gnu/services/web.scm (<hpcguix-web-configuration>)[address, port]: New
fields.
* doc/guix.texi (Web Services): Document them.
* gnu/tests/web.scm (%hpcguix-web-os): Add 'address'.
 2021-11-15 17:55:50 +01:00
Ludovic Courtès
782e9975dc
gnu: python-pytorch: Update to 1.10.0. 
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.0.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Adjust.
 2021-11-15 17:55:50 +01:00
Ryan Prior
1a501646f5
gnu: Add python-minikanren. 
* gnu/packages/python-xyz.scm (python-minikanren): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior
f661fa8e8f
gnu: Add python-etuples. 
* gnu/packages/python-xyz.scm (python-etuples): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior
37e6f02880
gnu: Add python-cons. 
* gnu/packages/python-xyz.scm (python-cons): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior
9373007321
gnu: Add python-logical-unification. 
* gnu/packages/python-xyz.scm (python-logical-unification): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior
0ace339cbe
gnu: Add python-multipledispatch. 
* gnu/packages/python-xyz.scm (python-multipledispatch): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:49 +01:00
Ludovic Courtès
2a32c99b38
gnu: clang-toolchain: Add libomp. 
* gnu/packages/llvm.scm (make-clang-toolchain)[inputs]: Add LIBOMP.
 2021-11-15 17:55:49 +01:00
Vinicius Monego
3288d6bf76
gnu: Add python-rtree. 
* gnu/packages/geo.scm (python-rtree): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:49:24 +01:00
Foo Chuan Wei
386db367c9
gnu: Add python-ta-lib. 
* gnu/packages/finance.scm (python-ta-lib): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:40:30 +01:00
Foo Chuan Wei
f50c9b45ad
gnu: Add cl-chemboy. 
* gnu/packages/lisp-xyz.scm (cl-chemboy, ecl-chemboy, sbcl-chemboy):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:38:14 +01:00
Foo Chuan Wei
8e18eb8cdf
gnu: Add cl-chemical-compounds. 
* gnu/packages/lisp-xyz.scm (cl-chemical-compounds,
  ecl-chemical-compounds, sbcl-chemical-compounds): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:32:36 +01:00
Foo Chuan Wei
333e1b3ce6
gnu: Add cl-periodic-table. 
* gnu/packages/lisp-xyz.scm (cl-periodic-table, ecl-periodic-table,
  sbcl-periodic-table): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:26:58 +01:00
Ricardo Wurmus
616bcc9c0b
gnu: python-scanpy: Run tests conditionally. 
* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Respect TESTS?
argument.
 2021-11-15 15:21:06 +00:00
Julien Lepiller
46432cceeb
gnu: guile-netlink: Update to 1.1. 
* gnu/packages/guile-xyz.scm (guile-netlink): Update to 1.1.
 2021-11-15 16:05:19 +01:00
Arun Isaac
f2ad33bc39
gnu: python-pingouin: Update to 0.5.0. 
* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.0.
 2021-11-15 17:19:52 +05:30
Ricardo Wurmus
078934bdd4
gnu: python-scipy: Run tests conditionally. 
* gnu/packages/python-science.scm (python-scipy)[arguments]: Respect TESTS? in
'CHECK phase.
 2021-11-15 11:46:23 +00:00
Ricardo Wurmus
373d2099c9
gnu: Add python-hnswlib. 
* gnu/packages/python-xyz.scm (python-hnswlib): New variable.
 2021-11-15 11:35:03 +00:00
Ricardo Wurmus
f2d5597145
gnu: Add texlive-fira. 
* gnu/packages/tex.scm (texlive-fira): New variable.
 2021-11-15 11:34:58 +00:00
phodina
ce9b9e7cba
gnu: Add rust-adblock-0.4. 
* gnu/packages/crates-io.scm (rust-adblock-0.4): New variable.
* gnu/packages/patches/rust-adblock-ignore-live-tests.patch: New file.
* gnu/local.mk: Add patch.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:39:17 +01:00
phodina
e5354455e5
gnu: Add rust-tokio-1.8. 
* gnu/packages/crates-io.scm (rust-tokio-1.8): New variable.
  (rust-tokio-1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:55 +01:00
phodina
a8cce5c3b9
gnu: Add rust-selectors-0.21. 
* gnu/packages/crates-io.scm (rust-selectors-0.21): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:39 +01:00
phodina
a19423cd75
gnu: Add rust-rmp-serde-0.13. 
* gnu/packages/crates-io.scm (rust-rmp-serde-0.13): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:23 +01:00
phodina
d3d064a073
gnu: Add rust-twoway-0.2. 
* gnu/packages/crates-io.scm (rust-twoway-0.2): New variable.
  (rust-twoway-0.1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:08 +01:00
phodina
c8f6f58c9a
gnu: rust-rmp-serde: Update to 0.15.5. 
* gnu/packages/crates-io.scm (rust-rmp-serde): Update to 0.15.5.
(rust-serdeconv-0.4)[arguments]: Update rust-rmp-serde-0.15 in cargo-inputs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:37:51 +01:00
phodina
62939e47b3
gnu: Add rust-addr-0.14. 
* gnu/packages/crates-io.scm (rust-addr-0.14): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:37:37 +01:00
phodina
3fb4515d0f
gnu: Add rust-no-std-net-0.5. 
* gnu/packages/crates-io.scm (rust-no-std-net-0.5): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:37:18 +01:00
phodina
5489dd376f
gnu: Add rust-publicsuffix-2. 
* gnu/packages/crates-io.scm (rust-publicsuffix-2): New variable.
(rust-publicsuffix-1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:36:57 +01:00
phodina
492bec66a8
gnu: Add rust-psl-2. 
* gnu/packages/crates-io.scm (rust-psl-2): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:36:35 +01:00
phodina
6d5295acb8
gnu: Add rust-psl-types-2. 
* gnu/packages/crates-io.scm (rust-psl-types-2): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:36:20 +01:00
phodina
01b64290cb
gnu: Add rust-lifeguard-0.6. 
* gnu/packages/crates-io.scm (rust-lifeguard-0.6): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:36:00 +01:00
Michael Rohleder
dd1b0d9d76
gnu: stockfish: Update to 14.1. 
* gnu/packages/games.scm (stockfish): Update to 14.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:33:24 +01:00
pinoaffe
2b1e807733
gnu: Add emacs-org-vcard 
* gnu/packages/emacs-xyz.scm (emacs-org-vcard): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:32:05 +01:00
phodina via Guix-patches via
879bcb71e8
gnu: Add mtm. 
* gnu/packages/terminals.scm (mtm): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:26:17 +01:00
jgart
50f3b082a7
gnu: Add music21. 
* gnu/packages/music.scm (music21): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:17:50 +01:00
Tanguy Le Carrour
1e9bed9ebe
gnu: profanity: Update to 0.11.1. 
* gnu/packages/messaging.scm (profanity): Update to 0.11.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:10:16 +01:00
Tanguy Le Carrour
378955341a
gnu: grisbi: Update to 2.0.5. 
* gnu/packages/finance.scm (grisbi): Update to 2.0.5.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:08:17 +01:00