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Author SHA1 Message Date
Julien Lepiller
b68aff1f05
gnu: certbot: Add support for manual plugin. 
* gnu/services/certbot.scm (certificate-configuration): Add challenge,
auth-hook and cleanup-hook fields.
(certbot-command): Use them.
* doc/guix.texi (Certificate Services): Document them.
 2019-04-25 19:46:18 +02:00
Julien Lepiller
c3634df2a4
gnu: ocaml@4.02: Remove the package, affected by a CVE, and its dependent 
packages.

This fixes <https://bugs.gnu.org/27462>.

* gnu/packages/ocaml.scm (ocaml-4.02, camlp4-4.02, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit)
(ocaml4.02-camlzip, ocaml4.02-ocamlmod, ocaml4.02-zarith)
(ocaml4.02-qcheck, ocaml4.02-qtest, ocaml4.02-stringext)
(ocaml4.02-bisect, ocaml4.02-bitstring, ocaml4.02-result)
(ocaml4.02-topkg, ocaml4.02-rresult, ocaml4.02-sqlite3, ocaml4.02-csv)
(ocaml4.02-mtime, ocaml4.02-cmdliner, ocaml4.02-fmt, ocaml4.02-astring)
(ocaml4.02-alcotest, ocaml4.02-ppx-tools, ocaml4.02-react, ocaml4.02-ssl)
(ocaml4.02-lwt, ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath)
(ocaml4.02-bos, ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar)
(ocaml4.02-uutf, ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64)
(ocaml4.02-omake, ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-bin-prot, ocaml4.02-fieldslib)
(ocaml4.02-ppx-core, ocaml4.02-ppx-optcomp, ocaml4.02-ppx-driver)
(ocaml4.02-cppo, ocaml4.02-ppx-deriving, ocaml4.02-ppx-type-conv)
(ocaml4.02-ppx-inline-test, ocaml4.02-ppx-bench, ocaml4.02-ppx-compare)
(ocaml4.02-sexplib, ocaml4.02-typerep, ocaml4.02-variantslib)
(ocaml4.02-ppx-sexp-conv, ocaml4.02-ppx-variants-conv)
(ocaml4.02-ppx-here, ocaml4.02-ppx-assert, ocaml4.02-ppx-enumerate)
(ocaml4.02-ppx-let, ocaml4.02-ppx-typerep-conv, ocaml4.02-ppx-sexp-value)
(ocaml4.02-ppx-pipebang, ocaml4.02-ppx-bin-prot, ocaml4.02-ppx-fail)
(ocaml4.02-ppx-custom-printf, ocaml4.02-ppx-sexp-message)
(ocaml4.02-ppx-fields-conv, ocaml4.02-seq, ocaml4.02-re)
(ocaml4.02-ppx-expect, ocaml4.02-ppx-jane, ocaml4.02-core-kernel)
(ocaml4.02-async-kernel, ocaml4.02-async-rpc-kernel, ocaml4.02-core)
(ocaml4.02-async-unix, ocaml4.02-async-extra, ocaml4.02-async)
(ocaml4.02-ocplib-endian, ocaml4.02-easy-format, optcomp)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): Remove variables.
* guix/build-system/ocaml.scm (default-ocaml4.02)
(default-ocaml4.02-findlib, package-with-ocaml4.02)
(strip-ocaml4.02-variant): Remove variables.
 2019-04-25 19:01:31 +02:00
Julien Lepiller
6e49426761
gnu: ocamlify: Downgrade to 0.0.1. 
Version 0.0.2 cannot be built with the latest OCaml, whereas this
version does.  This is also the version used by opam.

* gnu/packages/ocaml.scm (ocamlify): Downgrade to 0.0.1.
[arguments]: Do not use ocaml-4.02.
 2019-04-25 19:01:05 +02:00
Julien Lepiller
0705f389d1
gnu: Remove ocaml-jbuilder. 
Jbuilder is deprecated and replaced by dune.

* gnu/packages/ocaml.scm (ocaml-jbuilder): Remove variable.
(ocaml-zed, ocaml-utop): Use dune-build-system.
 2019-04-25 19:00:48 +02:00
Julien Lepiller
bbe9915b30
gnu: bap: Update to 1.6.0. 
* gnu/packages/ocaml.scm (bap): Update to 1.6.0.
(ocaml-frontc): Update to 3.4.1.
(ocaml-fileutils, ocaml-cstruct, ocaml-hex, ocaml-ezjsonm, ocaml-uri):
New variables.
(ocaml4.02-fileutils, ocaml4.02-cstruct, ocaml4.02-hex,
ocaml4.02-ezjsonm, ocaml4.02-uri): Remove variables.
 2019-04-25 19:00:25 +02:00
Julien Lepiller
ce9a30e6f4
gnu: Add ocaml-bigarray-compat. 
* gnu/packages/ocaml.scm (ocaml-bigarray-compat): New variable.
 2019-04-25 18:59:55 +02:00
Julien Lepiller
57e2b24dc0
nls: Update 'es' translation. 2019-04-25 18:55:12 +02:00
Julien Lepiller
9d92774a22
nls: Update 'de' translation. 2019-04-25 18:55:09 +02:00
Julien Lepiller
518acc73c1
nls: Update 'fr' translation. 2019-04-25 18:54:46 +02:00
Ricardo Wurmus
cd8dce8ac4
gnu: gnome-shell: Add gdk-pixbuf+svg to inputs. 
Fixes <https://bugs.gnu.org/34124>.

* gnu/packages/gnome.scm (gnome-shell)[inputs]: Add gdk-pixbuf+svg.
[arguments]: Add the lib directory of gdk-pixbuf+svg to the LD_LIBRARY_PATH
wrapper of the gnome-shell executable.
 2019-04-25 15:30:07 +02:00
Nicolas Goaziou
92e1e0ec4b
gnu: fltk: Update to 1.3.5. 
* gnu/packages/fltk.scm (fltk): Update to 1.3.5.
 2019-04-25 14:59:16 +02:00
Ludovic Courtès
187122b902
installer: Ask for confirmation of the user passwords. 
* gnu/installer/newt/user.scm (run-user-add-page): Add #:name and
 #:home-directory and honor them.  Add call to 'confirm-password'.
 2019-04-25 12:23:54 +02:00
Ludovic Courtès
8f2b7e3cb4
installer: Ask for confirmation of the root password. 
* gnu/installer/newt/user.scm (confirm-password): New procedure.
(run-root-password-page): Add call to 'confirm-password'.
 2019-04-25 12:23:54 +02:00
Ludovic Courtès
453c976501
installer: Use FLAG-PASSWORD for the encryption passphrase confirmation. 
* gnu/installer/newt/partition.scm (prompt-luks-passwords)
<password-confirm-page>: Pass #:input-flags to 'run-input-page'.
 2019-04-25 12:23:54 +02:00
Chris Marusich
4728806185
gnu: Add python-yubikey-manager and python2-yubikey-manager. 
* gnu/packages/security-token.scm (python-yubikey-manager)
(python2-yubikey-manager): New variables.
 2019-04-24 21:08:39 -07:00
Chris Marusich
5297e97599
gnu: Add python-fido2 and python2-fido2. 
* gnu/packages/security-token.scm (python-fido2, python2-fido2): New
variables.
 2019-04-24 21:08:39 -07:00
Chris Marusich
41553c90e4
gnu: Add public-suffix-list. 
* gnu/packages/dns.scm (public-suffix-list): New variable.
 2019-04-24 21:08:39 -07:00
Chris Marusich
5f7d151c77
gnu: Add libu2f-host. 
* gnu/packages/security-token.scm (libu2f-host): New variable.
 2019-04-24 21:08:39 -07:00
Chris Marusich
404037f83d
gnu: Add python-pyscard and python2-pyscard. 
* gnu/packages/security-token.scm (python-pyscard, python2-pyscard): New
variables.
 2019-04-24 21:08:38 -07:00
Chris Marusich
968e86bd93
gnu: Add python-pyfakefs and python2-pyfakefs. 
* gnu/packages/patches/python-pyfakefs-remove-bad-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.
* gnu/packages/check.scm (python-pyfakefs, python2-pyfakefs): New
  variables.
 2019-04-24 21:08:36 -07:00
Tobias Geerinckx-Rice
0406434baa
gnu: bind: Update to 9.12.4-P1 [fixes CVE-2018-5743, CVE-2019-6467]. 
* gnu/packages/dns.scm (isc-bind): Update to 9.12.4-P1.
[source]: Add patch.
[inputs]: Add python and python-ply.
* packages/patches/bind-fix-unused-pk11-ecc-constants.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-04-25 04:42:17 +02:00
Tobias Geerinckx-Rice
9b19734c50
gnu: r-yamss: Fix typo in description. 
* gnu/packages/bioconductor.scm (r-yamss)[description]: Fix typo.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
61985d650b
gnu: python-dill: Fix typo in description. 
* gnu/packages/python-xyz.scm (python-dill)[description]: Fix typo.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
52beae7b8a
gnu, guix: Yearly ritual purging of the filesystems. 
* gnu/packages/android.scm (android-ext4-utils)[synopsis]: Fix ‘file
system’ spelling.
* gnu/packages/disk.scm (rmlint)[synopsis, description]: Likewise.
* gnu/packages/golang.scm (go-github-com-kr-fs)[synopsis, description]:
Likewise & edit for grammar.
* gnu/packages/ipfs.scm (gx, go-ipfs)[description]: Likewise.
* /gnu/packages/java.scm (java-commons-vfs)[synopsis]: Likewise.
* gnu/packages/linux.scm (fuseiso)[description]: Likewise.
(genext2fs)[synopsis, description]: Likewise.
* gnu/packages/package-management.scm (libostree)[description]: Likewise.
* gnu/packages/python-xyz.scm (python-requests-file)[description]:
Likewise & mark up.
* gnu/packages/rails.scm (ruby-with-advisory-lock)[description]:
Likewise.
* gnu/packages/ruby.scm (ruby-rerun)[description]: Likewise.
* guix/build/go-build-system.scm (setup-go-environment)<docstring>:
Likewise.
* guix/store/deduplication.scm (get-temp-link)<docstring>: Likewise.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
7ecd1761a2
gnu: bubblewrap: Edit description. 
* gnu/packages/virtualization.scm (bubblewrap)[description]: Mark up & edit.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
ac32a451fa
gnu: perl-filesys-notify-simple: Edit description. 
* gnu/packages/perl.scm (perl-filesys-notify-simple)[description]: Mark up & edit.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
ddfd529cc9
gnu: libimobiledevice: Edit description. 
* gnu/packages/libusb.scm (libimobiledevice)[description]: Fix grammar & spelling.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
2cffa2f240
gnu: libsvm: Update to 3.23. 
* gnu/packages/machine-learning.scm (libsvm): Update to 3.23.
 2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice
5ed720976a
gnu: openfst: Update to 1.7.2. 
* gnu/packages/machine-learning.scm (openfst): Update to 1.7.2.
 2019-04-25 04:42:16 +02:00
Ludovic Courtès
ecb33b87aa
vm: Adjust FAT serial number code to 32-bit Guile. 
On 32-bit systems, 'string-hash' would raise an out-of-range exception
when the second argument was 2^32.

* gnu/build/vm.scm (make-iso9660-image): Pass 2^32 - 1 to 'string-hash'.
 2019-04-25 00:45:35 +02:00
Ludovic Courtès
e7c7b73320
installer: Preserve order of user accounts. 
* gnu/installer/newt/user.scm (run-user-page): Add call to 'reverse'.
 2019-04-25 00:45:35 +02:00
Ludovic Courtès
5be7aecd14
vm: 'system-disk-image' no longer requires the OS to define the "/" file system. 
Previously 'guix system disk-image' would fail if the OS didn't define a
"/" file system, even though it actually overrides that file system.

* gnu/system/vm.scm (system-disk-image)[root-uuid]: Turn into a
procedure.
Call 'root-uuid' on a variant of OS with a "/" file system and inherit
from that.
 2019-04-25 00:45:35 +02:00
Ludovic Courtès
91a7c4998f
installer: Ask for the root account password. 
Fixes <https://bugs.gnu.org/35399>.

* gnu/installer/newt/user.scm (run-root-password-page): New procedure.
* gnu/installer/user.scm (users->configuration): Filter out the "root"
account.
* gnu/installer/final.scm (create-user-database): Set 'uid' field in
'user-account' form.
 2019-04-25 00:45:35 +02:00
Ludovic Courtès
399c31d40a
installer: 'run-input-page' has a new #:input-flags parameter. 
* gnu/installer/newt/page.scm (run-input-page): Add #:input-flags and
honor it.
 2019-04-25 00:45:35 +02:00
Ludovic Courtès
898677ed17
installer: Ask for user password and initialize /etc/shadow. 
Partly fixes <https://bugs.gnu.org/35399>.

* gnu/installer/user.scm (<user>)[password]: New field.
* gnu/installer/final.scm (%seed): New variable.
(integer->alphanumeric-char, random-string)
(create-user-database): New procedures.
(install-system): Call 'create-user-database'.
* gnu/installer/newt/final.scm (run-install-shell): Add #:users and pass
it to 'install-system'.
(run-final-page): Pass #:users to 'run-install-shell'.
* gnu/installer/newt/user.scm (run-user-add-page): Add password entry.
Pass its result as the 'password' field of <user>.
 2019-04-25 00:45:34 +02:00
Ludovic Courtès
3cc033f2a8
installer: Add missing 'G_' for networking message. 
* gnu/installer/newt/network.scm (wait-technology-powered): Add missing
'G_'.
 2019-04-25 00:45:34 +02:00
Ludovic Courtès
17503ea8a2
self: Install 'guix.zh_CN.info'. 
Reported by Julien Lepiller.

* guix/self.scm (info-manual): Adjust file name regexp so that it
matches *.zh_CN.texi.
 2019-04-25 00:45:34 +02:00
Ludovic Courtès
01ac0e6be1
system: Add guile-readline and guile-colorized to %BASE-PACKAGES. 
This adds pretty much nothing to the system closure size.

* gnu/system.scm (%base-packages): Add GUILE-READLINE and
GUILE-COLORIZED.
 2019-04-25 00:45:34 +02:00
Ludovic Courtès
55111549e8
install: Add node name in Castellano. 
* gnu/system/install.scm (%installation-node-names): Add "es".
 2019-04-25 00:45:34 +02:00
Danny Milosavljevic
9374cbd1fb
services: fprintd: Provide polkit policy. 
* gnu/services/authentication.scm (fprintd-service-type)[extensions]: Add
polkit-service-type.
 2019-04-24 22:21:35 +02:00
Ricardo Wurmus
190dc09e95
gnu: r-xtable: Update to 1.8-4. 
* gnu/packages/statistics.scm (r-xtable): Update to 1.8-4.
 2019-04-24 17:04:54 +02:00
Ricardo Wurmus
3a9991e4dd
gnu: r-dbplyr: Update to 1.4.0. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.0.
 2019-04-24 17:04:54 +02:00
Ricardo Wurmus
3cc8f66e95
gnu: r-testthat: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-testthat): Update to 2.1.1.
 2019-04-24 17:04:54 +02:00
Ricardo Wurmus
a300ab685a
gnu: r-igraph: Update to 1.2.4.1. 
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.1.
 2019-04-24 17:04:54 +02:00
Ricardo Wurmus
8fc6188e4f
gnu: r-pamr: Update to 1.56.1. 
* gnu/packages/cran.scm (r-pamr): Update to 1.56.1.
 2019-04-24 17:04:54 +02:00
Ricardo Wurmus
a059791f4e
gnu: r-ggforce: Update to 0.2.2. 
* gnu/packages/cran.scm (r-ggforce): Update to 0.2.2.
 2019-04-24 17:04:54 +02:00
Ricardo Wurmus
88a39cc6f5
gnu: r-rms: Update to 5.1-3.1. 
* gnu/packages/cran.scm (r-rms): Update to 5.1-3.1.
 2019-04-24 17:04:53 +02:00
Ricardo Wurmus
f1c1bbc1a6
gnu: r-genetics: Update to 1.3.8.1.2. 
* gnu/packages/cran.scm (r-genetics): Update to 1.3.8.1.2.
 2019-04-24 17:04:53 +02:00
Ricardo Wurmus
378b5f4d1e
gnu: r-fields: Update to 9.7. 
* gnu/packages/cran.scm (r-fields): Update to 9.7.
 2019-04-24 17:04:53 +02:00
Ricardo Wurmus
90325bb182
gnu: r-splitstackshape: Update to 1.4.8. 
* gnu/packages/cran.scm (r-splitstackshape): Update to 1.4.8.
 2019-04-24 17:04:53 +02:00