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Author SHA1 Message Date
Tobias Geerinckx-Rice 58649b8747
doc: Remove obsolete example module import. 
This follows up on commit a247f5c753.

* doc/guix.texi (X Window): Remove unused (srfi srfi-1) from
the modify-services example.
 2021-11-16 01:15:04 +01:00
Christopher Baines db5907138c
gnu: guix-build-coordinator: Update to 0-37.200ffe7. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-37.200ffe7.
 2021-11-15 21:49:21 +00:00
Jelle Licht 63915955e2
gnu: libuv-for-node: Update to 1.42.0. 
* gnu/packages/libevent.scm (libuv-for-node): Update to 1.42.0.
 2021-11-15 22:43:24 +01:00
Jelle Licht f3cd70ff8c
gnu: node-lts: Update to 14.18.1 [security fixes]. 
* gnu/packages/node.scm (node-lts): Update to 14.18.1.
[native-inputs]: Replace c-ares with c-ares-for-node.
[inputs]: Replace c-ares with c-ares-for-node.

Includes fixes for CVE-2021-22918, CVE-2021-22930, CVE-2021-22931,
CVE-2021-22939, and CVE-2021-22940.
 2021-11-15 22:43:24 +01:00
Jelle Licht cae7c3f389
gnu: llhttp-bootstrap: Update to 2.1.4 [security-fixes]. 
* gnu/packages/node.scm (llhttp-bootstrap): Update to 2.1.4.

Includes fixes for CVE-2021-22959 and CVE-2021-22960.
 2021-11-15 22:43:23 +01:00
Jelle Licht ecbf59abad
gnu: Add c-ares-for-node. 
* gnu/packages/adns.scm (c-ares-for-node): New variable.

Co-authored-by: Marius Bakke <marius@gnu.org>
 2021-11-15 22:43:23 +01:00
Jelle Licht a69076e792
gnu: node: Add cpe-name. 
* gnu/packages/node.scm (node)[properties]: Add cpe-name.
 2021-11-15 22:43:23 +01:00
Lenny Händler 847f2ae859
gnu: taskwarrior: Update to 2.6.1. 
* gnu/packages/task-management.scm (taskwarrior): Update to 2.6.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 22:26:50 +01:00
Nicolas Goaziou ae14076578
gnu: emacs-helm: Update to 3.8.1. 
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.8.1.
 2021-11-15 21:43:39 +01:00
Nicolas Goaziou 1a925d3af7
gnu: pdfarranger: Update to 1.8.0. 
* gnu/packages/pdf.scm (pdfarranger): Update to 1.8.0.
 2021-11-15 21:41:26 +01:00
Jean-Baptiste Volatier a1a7e2b951
gnu: julia: Fix llvm-julia version. 
LLVM bundled in the binary julia distributed by upstream has its
version with a "jl" suffix. The llvm-julia package does not have
this suffix, which causes some packages (e. g. LLVM.jl) to fail to
load.

LLVM.jl does this in order to be sure that it is loading a LLVM as
patched for julia and not LLVM from the distribution which will
lack the correct patches on distribs other than GUIX.

I guess there might be other packages that rely on this, so we
should fix our llvm-julia package.

* gnu/packages/julia.scm (llvm)
[source]: Add missing upstream patch
[arguments]: Add configure-flag to set a "jl" suffix to llvm version
(julia)[arguments]: Symlink llvm to llvm-11jl.so

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-15 22:38:09 +02:00
Nicolas Goaziou 2b56e477f3
gnu: emacs-consult: Update to 0.13. 
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.13.
 2021-11-15 21:35:33 +01:00
Nicolas Goaziou 9784e14817
gnu: emacs-exwm: Update to 0.26. 
* gnu/packages/emacs-xyz.scm (emacs-exwm): Update to 0.26.
 2021-11-15 21:33:51 +01:00
Nicolas Goaziou d24333c29c
gnu: emacs-rustic: Update to 2.1. 
* gnu/packages/emacs-xyz.scm (emacs-rustic): Update to 2.1.
 2021-11-15 21:31:38 +01:00
Nicolas Goaziou 563354db48
gnu: emacs-marginalia: Update to 0.10. 
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.10.
 2021-11-15 21:29:47 +01:00
Nicolas Goaziou fb8e5f530e
gnu: borgmatic: Fix typo in description. 
* gnu/packages/backup.scm (borgmatic): Fix typo, "software" being a mass noun.
 2021-11-15 21:17:21 +01:00
Ludovic Courtès 21332f3b8c
gnu: hpcguix-web: Update to 0.2.0. 
* gnu/packages/web.scm (hpcguix-web): Update to 0.2.0.
[arguments]: In 'wrap-program' phase, add guile-zlib to DEPS.
[native-inputs]: Add GUILE.
[inputs]: Add GUILE-ZLIB, GUILE-COMMONMARK, and GUILE-JSON.
[propagated-inputs]: Remove.  These were pointless.
* gnu/services/web.scm (<hpcguix-web-configuration>)[address, port]: New
fields.
* doc/guix.texi (Web Services): Document them.
* gnu/tests/web.scm (%hpcguix-web-os): Add 'address'.
 2021-11-15 17:55:50 +01:00
Ludovic Courtès 782e9975dc
gnu: python-pytorch: Update to 1.10.0. 
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.0.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Adjust.
 2021-11-15 17:55:50 +01:00
Ryan Prior 1a501646f5
gnu: Add python-minikanren. 
* gnu/packages/python-xyz.scm (python-minikanren): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior f661fa8e8f
gnu: Add python-etuples. 
* gnu/packages/python-xyz.scm (python-etuples): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior 37e6f02880
gnu: Add python-cons. 
* gnu/packages/python-xyz.scm (python-cons): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior 9373007321
gnu: Add python-logical-unification. 
* gnu/packages/python-xyz.scm (python-logical-unification): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:50 +01:00
Ryan Prior 0ace339cbe
gnu: Add python-multipledispatch. 
* gnu/packages/python-xyz.scm (python-multipledispatch): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 17:55:49 +01:00
Ludovic Courtès 2a32c99b38
gnu: clang-toolchain: Add libomp. 
* gnu/packages/llvm.scm (make-clang-toolchain)[inputs]: Add LIBOMP.
 2021-11-15 17:55:49 +01:00
Vinicius Monego 3288d6bf76
gnu: Add python-rtree. 
* gnu/packages/geo.scm (python-rtree): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:49:24 +01:00
Foo Chuan Wei 386db367c9
gnu: Add python-ta-lib. 
* gnu/packages/finance.scm (python-ta-lib): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:40:30 +01:00
Foo Chuan Wei f50c9b45ad
gnu: Add cl-chemboy. 
* gnu/packages/lisp-xyz.scm (cl-chemboy, ecl-chemboy, sbcl-chemboy):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:38:14 +01:00
Foo Chuan Wei 8e18eb8cdf
gnu: Add cl-chemical-compounds. 
* gnu/packages/lisp-xyz.scm (cl-chemical-compounds,
  ecl-chemical-compounds, sbcl-chemical-compounds): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:32:36 +01:00
Foo Chuan Wei 333e1b3ce6
gnu: Add cl-periodic-table. 
* gnu/packages/lisp-xyz.scm (cl-periodic-table, ecl-periodic-table,
  sbcl-periodic-table): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:26:58 +01:00
Vivien Kraus fe2575f9a9
gnu: gnome-calendar: Fix build. 
* gnu/packages/gnome.scm (gnome-calendar)[arguments]: Use meson 0.59.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:08:14 +01:00
Vivien Kraus 26e894414a
gnu: gnome-mines: Fix build. 
* gnu/packages/gnome.scm (gnome-mines)[arguments]: Use meson 0.59.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:05:47 +01:00
Vivien Kraus 74432fb7ba
gnu: gnome-2048: Fix build. 
* gnu/packages/games.scm (gnome-2048)[arguments]: Use meson 0.59.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-15 17:03:00 +01:00
Ricardo Wurmus 616bcc9c0b
gnu: python-scanpy: Run tests conditionally. 
* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Respect TESTS?
argument.
 2021-11-15 15:21:06 +00:00
Julien Lepiller 46432cceeb
gnu: guile-netlink: Update to 1.1. 
* gnu/packages/guile-xyz.scm (guile-netlink): Update to 1.1.
 2021-11-15 16:05:19 +01:00
Arun Isaac f2ad33bc39
gnu: python-pingouin: Update to 0.5.0. 
* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.0.
 2021-11-15 17:19:52 +05:30
Ricardo Wurmus 078934bdd4
gnu: python-scipy: Run tests conditionally. 
* gnu/packages/python-science.scm (python-scipy)[arguments]: Respect TESTS? in
'CHECK phase.
 2021-11-15 11:46:23 +00:00
Ricardo Wurmus 373d2099c9
gnu: Add python-hnswlib. 
* gnu/packages/python-xyz.scm (python-hnswlib): New variable.
 2021-11-15 11:35:03 +00:00
Ricardo Wurmus f2d5597145
gnu: Add texlive-fira. 
* gnu/packages/tex.scm (texlive-fira): New variable.
 2021-11-15 11:34:58 +00:00
Vivien Kraus 4498c2b6de
gnu: vala-language-server: Upgrade to 0.48.3. 
* gnu/packages/gnome-xyz.scm (vala-language-server): Upgrade to 0.48.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 12:17:32 +01:00
Vivien Kraus 04d53fa839
gnu: devhelp: Upgrade to 41.2. 
* gnu/packages/gnome.scm (devhelp): Upgrade to 41.2 to upgrade the webkit
dependency to 4.1.
[arguments]: Use meson 0.59.
In 'skip-gtk-update-icon-cache' phase, the post install script has been
moved from meson_post_install.py to build-aux/meson/.
In 'fix-devhelp-gir-inputs' phase, the devhelp GIR still mentions webkit
4.0, use 4.1 instead.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 12:15:46 +01:00
Josselin Poiret 4b28553e73
news: Notify of Wayland support in GDM 
* etc/news.scm: Add a news entry.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-15 11:49:45 +01:00
phodina ce9b9e7cba
gnu: Add rust-adblock-0.4. 
* gnu/packages/crates-io.scm (rust-adblock-0.4): New variable.
* gnu/packages/patches/rust-adblock-ignore-live-tests.patch: New file.
* gnu/local.mk: Add patch.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:39:17 +01:00
phodina e5354455e5
gnu: Add rust-tokio-1.8. 
* gnu/packages/crates-io.scm (rust-tokio-1.8): New variable.
  (rust-tokio-1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:55 +01:00
phodina a8cce5c3b9
gnu: Add rust-selectors-0.21. 
* gnu/packages/crates-io.scm (rust-selectors-0.21): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:39 +01:00
phodina a19423cd75
gnu: Add rust-rmp-serde-0.13. 
* gnu/packages/crates-io.scm (rust-rmp-serde-0.13): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:23 +01:00
phodina d3d064a073
gnu: Add rust-twoway-0.2. 
* gnu/packages/crates-io.scm (rust-twoway-0.2): New variable.
  (rust-twoway-0.1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:38:08 +01:00
phodina c8f6f58c9a
gnu: rust-rmp-serde: Update to 0.15.5. 
* gnu/packages/crates-io.scm (rust-rmp-serde): Update to 0.15.5.
(rust-serdeconv-0.4)[arguments]: Update rust-rmp-serde-0.15 in cargo-inputs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:37:51 +01:00
phodina 62939e47b3
gnu: Add rust-addr-0.14. 
* gnu/packages/crates-io.scm (rust-addr-0.14): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:37:37 +01:00
phodina 3fb4515d0f
gnu: Add rust-no-std-net-0.5. 
* gnu/packages/crates-io.scm (rust-no-std-net-0.5): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:37:18 +01:00
phodina 5489dd376f
gnu: Add rust-publicsuffix-2. 
* gnu/packages/crates-io.scm (rust-publicsuffix-2): New variable.
(rust-publicsuffix-1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 11:36:57 +01:00