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77905 commits

Author SHA1 Message Date
Mike Gerwitz 674b4bd1a6
gnu: Add java-jline-reader.
This package is part of JLine 3.

* gnu/packages/java.scm (java-jline-reader): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Mike Gerwitz 1700dfefbe
gnu: Add java-jline-terminal.
This is part of JLine 3.

I was able to get this working properly under Guix by providing ncurses'
infocmp, as well as ensuring the *.caps files were present in the JAR,
but similar methods didn't work for the tests; if you have Java
knowledge, I'd appreciate the help getting those tests enabled.

* gnu/packages/java.scm (java-jline-terminal): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Mike Gerwitz e28ea14693
gnu: Add java-eclipse-lsp4j packages.
All of these packages are components of java-eclipse-lsp4j, packaged
independently.  This contains only what was needed for tla2tools, and so
there are parts of java-eclipse-lsp4j that are not packaged.

Note that this does not package the latest version (0.12.0 at the time
of writing)---it depends on the Xtend language, which is a huge
packaging effort.  0.10.0 is the version expected by tla2tools, for
which this dependency was introduced.

* gnu/packages/java.scm (java-eclipse-lsp4j-common): New variable.
(java-eclipse-lsp4j-jsonrpc): New variable.
(java-eclipse-lsp4j-jsonrpc-debug): New variable.
(java-eclipse-lsp4j-generator): New variable.
(java-eclipse-lsp4j-debug): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Mike Gerwitz 58b0258a20
gnu: Add java-eclipse-xtext-xbase-lib.
This package is a component of xtext-lib.  The rest of xtext-lib was not
added.

* gnu/packages/java.scm (java-eclipse-xtext-xbase-lib): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Mike Gerwitz 45915d331a
gnu: Add java-gson-2.8.6.
This introduces a new package rather than upgrading the exist java-gson
package because it is built using OpenJDK11; I didn't want to have to
propagate that JDK dependency to the other packages that use it.

OpenJDK 11 was chosen becuase this dependency was introduced for
tla2tools.

* gnu/packages/java.scm (java-gson-2.8.6): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Philip McGrath 0ca37f3c7d
gnu: racket: Add aditional mirrors.
* gnu/packages/racket.scm (racket-minimal, racket)[source](uri): Lift
base urls into a new internal variable, '%installer-mirrors'.
Add mirrors at the University of Utah, Northwestern University,
the University of Waterloo, and Vrije Universiteit Brussel (Infogroep).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Philip McGrath 93867cb3be
gnu: racket: Racket inherits racket-minimal, not vice versa.
By design, the `racket` package is equivalent to 'racket-minimal'
plus 'raco pkg install -i main-distribution'.
This switch brings the Guix packages a small step closer to that goal.

* gnu/packages/racket.scm (racket-minimal, racket): Change
'racket-minimal' to be the base package and 'racket' to inherit
from it.  Move 'version', 'patches', 'home-page', 'build-system',
'arguments', and 'license' to 'racket-minimal'.
* gnu/packages/racket.scm (racket)[inputs]: Rather than copy and
pasting, use '(package-inputs racket-minimal)'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:45 +02:00
Philip McGrath cd9454f6ed
gnu: racket: Remove obsolete patch.
* gnu/packages/racket.scm (racket)[source](patches): Remove
"racket-store-checksum-override.patch", which is no longer needed since
we stopped injecting store paths into Racket files in commit 834aa48:
see <https://issues.guix.gnu.org/47180>.
* gnu/packages/patches/racket-store-checksum-override.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
Philip McGrath 3df04eb09f
gnu: racket: Move to (gnu packages racket).
* gnu/packages/scheme.scm (racket,racket-minimal): Move to ...
* gnu/packages/racket.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/racket.scm (racket)[synopsis]: Tweak.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
Vinicius Monego 3eec8cd31d
gnu: Add labplot.
* gnu/packages/kde.scm (labplot): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
Vinicius Monego adc96e1db3
gnu: Add libcerf.
* gnu/packages/maths.scm (libcerf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
Stefan Reichör 9661eb86e0
gnu: Add castget.
* gnu/packages/gpodder.scm (castget): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
Simon Josefsson 9c3986ffaf
gnu: Add xmlsec-openssl.
* gnu/packages/xml.scm (xmlsec-openssl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:44 +02:00
Michael Rohleder 561db254a5
gnu: xboard: Set default engine to gnuchess.
Fixes <https://issues.guix.gnu.org/45236>.

* gnu/packages/games.scm (xboard): Set default engine to gnuchess.
[arguments]: Add phase 'patch-default-engine.
[inputs]: Add chess.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:43 +02:00
Konrad Hinsen d87a0efeeb
cvs-download: Fix module exports
* guix/cvs-download.scm: Remove non-existent export cvs-reference-url,
  add cvs-reference-root-directory and cvs-reference-module

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-05-05 16:56:43 +02:00
Ludovic Courtès 7b83f6b992
gnu: lepton-eda: Switch to Guile 3.0.
* gnu/packages/engineering.scm (lepton-eda)[inputs]: Replace GUILE-2.2
with GUILE-3.0.
2021-05-05 16:56:43 +02:00
Ludovic Courtès e069611866
swh: Adjust for compatibility with Guile 2.2's (web client).
Guile <= 2.2.7 did not support #:verify-certificate? so work around it.

* guix/swh.scm (http-get*, http-post*) [! guile-3]: Add variant for
Guile 2.2.
2021-05-05 16:56:43 +02:00
Ricardo Wurmus da7f89c737
gnu: python-pybedtools: Update to 0.8.2.
* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.8.2.
[arguments]: Remove outdated substitutions; simplify check phase.
2021-05-05 16:18:13 +02:00
Ricardo Wurmus 75af43162e
gnu: python-nbconvert: Use patched texlive-amsfonts.
This is intended to fix a non-deterministic build error when xelatex inspects
the fonts directory and finds a broken font from texlive-amsfonts before the
correct font in texlive-cm.

* gnu/packages/python-xyz.scm (python-nbconvert)[native-inputs]: Replace
texlive-amsfonts with texlive-amsfonts/patched.
2021-05-05 15:28:14 +02:00
Ricardo Wurmus 9db6798824
gnu: Add texlive-amsfonts/patched.
* gnu/packages/tex.scm (texlive-amsfonts/patched): New variable.
2021-05-05 15:28:06 +02:00
Ricardo Wurmus 56e4d7204b
profiles: texlive-configuration: Handle updmap.cfg conflict.
The profile hook would fail when preparing an environment for a package using
texlive-union, because the union already had a updmap.cfg file.

Reported-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>.

* guix/profiles.scm (texlive-configuration): Delete updmap.cfg if it exists.
2021-05-05 14:50:04 +02:00
Ludovic Courtès af66a9510f
gnu: guix: Phases refer to #:system, #:target, and #:native-inputs.
* gnu/packages/package-management.scm (guix)[arguments]: In
'copy-bootstrap-guile' and 'wrap-program' phases, refer to #:system,
 #:native-inputs, and #:target instead of unquoting (%current-system)
and (%current-target-system).
2021-05-05 12:08:28 +02:00
Ludovic Courtès c47f3fc135
gnu: guix: Avoid Bash wrapper.
The Bash wrapper created by 'wrap-program' creates an extra
indirection and may annoyingly emit locale warnings:

  /gnu/store/…-bash-minimal-5.0.16/bin/bash: warning: setlocale: LC_ALL: cannot change locale (wtf)

This warning would typically show up when running Guix, as produced by
'guix pack guix', on a foreign distro, annihilating efforts made in
1d4ab335b2 and
8a973abc6f.

* gnu/packages/package-management.scm (guix)[arguments]: In
'wrap-program' phase, remove 'string-join' call for PATH and GOPATH.
Replace 'wrap-program' call with a 'substitute*' form.  Remove (when
target ...) form.
[inputs]: Remove "bash-minimal" added in commit
38b9af7c92 and no longer needed.
2021-05-05 12:08:17 +02:00
Ludovic Courtès 72b7ea416b
gnu: guix: Add run-time dependency on Guile-Lib.
This is a followup to 02e2e093e8, which
added Guile-Lib as an input but did not add it to the wrapper's search
path.

* gnu/packages/package-management.scm (guix)[arguments]: In
'wrap-program' phase, add GUILE-LIB to DEPS.
2021-05-05 12:08:13 +02:00
Leo Prikler 0f116d7f90
build-system: emacs: Clarify %install-dir.
The old comment is no longer adequate, see
<https://lists.gnu.org/archive/html/guix-patches/2021-05/msg00113.html>.

* guix/build/emacs-build-system.scm (%install-dir): Adjust comment to better
reflect usage of this variable.
2021-05-05 10:01:48 +02:00
Arun Isaac c1036042a5
gnu: crm114: Use emacs-build-system install phase.
* gnu/packages/mail.scm (crm114)[arguments]: Install the crm114 emacs mode
using the install phase from emacs-build-system, instead of in the custom
pre-install phase. Run the make-autoloads phase after this new
install-emacs-mode phase.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-05-05 10:01:48 +02:00
Maxim Cournoyer 2354d79b88
tests: go: Remove duplicate go-version->git-ref test.
The duplicate test being removed has not much value given that
go-version->git-ref is a no-op for version strings not matching the
%go-pseudo-version-rx regexp; that case is already tested by the test above.

* tests/go.scm ("go-version omited 'v' character"): Remove test.

Reported-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-05-05 00:58:04 -04:00
Maxim Cournoyer afec278417
ui: Suggest installing glibc-locales, not glibc-utf8-locales.
Users (both old and new) struggling with locale warnings is a recurrent theme;
part of it may be due to the glibc-utf8-locales package being misleading, as
it only includes a subset of the UTF-8 locales.  To prevent confusion, suggest
installing the glibc-locales package instead.

* guix/ui.scm (install-locale): Do not mention glibc-utf8-locales in the hint
message.  Use glibc-locales instead of glibc-utf8-locales in the provided
example.
2021-05-05 00:44:17 -04:00
Ludovic Courtès dd3e4fe6e7
gnu: guile2.2-guix: Add missing dependencies.
Reported by Maxime Devos <maximedevos@telenet.be>.

* gnu/packages/package-management.scm (guile2.2-guix)[inputs]
[propagated-inputs]: Add GUILE2.2-LIB, GUILE2.2-ZLIB, and
GUILE2.2-LZLIB.
2021-05-05 00:57:36 +02:00
Ludovic Courtès 2238bd8ddc
gnu: guile-lzlib: Add Guile 2.2 variant.
* gnu/packages/guile.scm (guile2.2-lzlib): New variable.
2021-05-05 00:57:36 +02:00
Ludovic Courtès 2a9af22540
gnu: guile-zlib: Add Guile 2.2 variant.
* gnu/packages/guile.scm (guile2.2-zlib): New variable.
2021-05-05 00:57:36 +02:00
Ludovic Courtès c3f20a6678
gnu: guix: Phases refer to #:system, #:target, and #:native-inputs.
* gnu/packages/package-management.scm (guix)[arguments]: In
'copy-bootstrap-guile' and 'wrap-program' phases, refer to #:system,
 #:native-inputs, and #:target instead of unquoting (%current-system)
and (%current-target-system).
2021-05-05 00:57:36 +02:00
Ludovic Courtès e42bfd236e
gnu: guix: Avoid Bash wrapper.
The Bash wrapper created by 'wrap-program' creates an extra
indirection and may annoyingly emit locale warnings:

  /gnu/store/…-bash-minimal-5.0.16/bin/bash: warning: setlocale: LC_ALL: cannot change locale (wtf)

This warning would typically show up when running Guix, as produced by
'guix pack guix', on a foreign distro, annihilating efforts made in
1d4ab335b2 and
8a973abc6f.

* gnu/packages/package-management.scm (guix)[arguments]: In
'wrap-program' phase, remove 'string-join' call for PATH and GOPATH.
Replace 'wrap-program' call with a 'substitute*' form.  Remove (when
target ...) form.
[inputs]: Remove "bash-minimal" added in commit
38b9af7c92 and no longer needed.
2021-05-05 00:57:35 +02:00
Ludovic Courtès 55f7cd701c
gnu: guix: Add run-time dependency on Guile-Lib.
This is a followup to 02e2e093e8, which
added Guile-Lib as an input but did not add it to the wrapper's search
path.

* gnu/packages/package-management.scm (guix)[arguments]: In
'wrap-program' phase, add GUILE-LIB to DEPS.
2021-05-05 00:57:35 +02:00
Ludovic Courtès 7593d1b4b8
gnu: lepton-eda: Update to 1.9.14-20210407.
* gnu/packages/engineering.scm (lepton-eda): Update to 1.9.14-20210407.
[arguments]: Adjust file names in 'fix-dynamic-link' phase.
2021-05-05 00:57:35 +02:00
Ludovic Courtès a47f40b30d
status: Avoid abbreviation in messages.
This is a followup to 68228d80dd.

* guix/status.scm (hook-message): Spell out "sub-directories".
2021-05-05 00:57:35 +02:00
Ron Nazarov 2959adef94
gnu: Add node-once.
* gnu/packages/node-xyz.scm (node-once): New variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-05-04 23:10:03 +02:00
Tobias Geerinckx-Rice a6992b38e7
gnu: knockd: Omit duplicate COPYING copy.
* gnu/packages/networking.scm (knockd)[arguments]: Set the typical
‘--docdir’.
2021-05-04 22:48:34 +02:00
Tobias Geerinckx-Rice 222e691666
gnu: knockd: Update to 0.8.
* gnu/packages/networking.scm (knockd): Update to 0.8.
2021-05-04 22:48:34 +02:00
Tobias Geerinckx-Rice 763feb97cd
gnu: powertop: Update to 2.14.
* gnu/packages/linux.scm (powertop): Update to 2.14.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
[arguments]: Add required #:configure-flags.
[native-inputs]: Add autoconf, automake, gettext, and libtool.
2021-05-04 22:48:34 +02:00
Tobias Geerinckx-Rice 58805da44d
doc: Fix typo and use @acronym for RAS.
* doc/guix.texi (Linux Services): Fix typo and use @acronym for RAS.
2021-05-04 22:48:34 +02:00
Tobias Geerinckx-Rice 14173cf4e9
gnu: rasdaemon: Edit synopsis & description.
* gnu/packages/linux.scm (rasdaemon)[description]: Fix typo and edit.
2021-05-04 22:48:34 +02:00
Tobias Geerinckx-Rice 27ee59d6a0
gnu: java-javaparser: Upgrade os.name to ‘Guix’.
* gnu/packages/java.scm (java-javaparser)[arguments]: Drop ‘SD’.
2021-05-04 22:48:34 +02:00
Tobias Geerinckx-Rice 9f0bdfd186
tests: go: Fix typos in test descriptions.
* tests/go.scm: Fix ‘embeded’ typos.
2021-05-04 22:48:27 +02:00
Tobias Geerinckx-Rice ef7275cd19
doc: Fix typos.
* doc/contributing.texi (Translating Guix): Fix ‘developpers’ and
‘superseeded’ typos.  Use @var mark-up where appropriate.
2021-05-04 22:30:01 +02:00
Tobias Geerinckx-Rice 58f4b49a52
gnu: go-gopkg-in-go-playground-assert-v1: Fix typo in description.
* gnu/packages/golang.scm (go-gopkg-in-go-playground-assert-v1)
[description]: Fix typo.
2021-05-04 22:30:01 +02:00
Roel Janssen aa7eeabe9a
gnu: Add r-naturalsort.
* gnu/packages/cran.scm (r-naturalsort): New variable.
2021-05-04 21:34:24 +02:00
Leo Famulari 4ca8a00263
gnu: Exim: Update to 4.94.2 [security fixes].
Fixes CVE-2020-{27216,28007,28008,28009,28010,28011,28012,28013,28014,28015,
28016,28017,28018,28019,28020,28021,28022,28023,28024,28025,28026}.

See the upstream security advisory for more information:

https://exim.org/static/doc/security/CVE-2020-qualys/21nails.txt

* gnu/packages/mail.scm (exim): Update to 4.94.2.
2021-05-04 11:42:07 -04:00
Ludovic Courtès b37ab28401
Update NEWS. 2021-05-04 16:57:05 +02:00
Tobias Geerinckx-Rice 721c5a8709
gnu: s6-linux-init: Update to 1.0.6.3.
* gnu/packages/skarnet.scm (s6-linux-init): Update to 1.0.6.3.
2021-05-04 16:14:15 +02:00