From ff939ef4d53af151683fbbae389cf60d76aef6ae Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Fri, 9 Nov 2018 16:55:06 +0100
Subject: [PATCH] gnu: Add r-h5.

* gnu/packages/cran.scm (r-h5): New variable.
---
 gnu/packages/cran.scm | 31 +++++++++++++++++++++++++++++++
 1 file changed, 31 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 33dda347b5..e22c5010d9 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -32,6 +32,7 @@ (define-module (gnu packages cran)
   #:use-module (guix download)
   #:use-module (guix utils)
   #:use-module (guix build-system r)
+  #:use-module (gnu packages base)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages gnome)
@@ -3472,6 +3473,36 @@ (define-public r-heatmaply
     ;; Either version of the license.
     (license (list license:gpl2 license:gpl3))))
 
+(define-public r-h5
+  (package
+    (name "r-h5")
+    (version "0.9.9")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "h5" version))
+       (sha256
+        (base32
+         "14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"))))
+    (build-system r-build-system)
+    (inputs
+     `(("zlib" ,zlib)
+       ("hdf5" ,hdf5)))
+    (native-inputs
+     `(("which" ,which)))
+    (propagated-inputs
+     `(("r-rcpp" ,r-rcpp)))
+    (home-page "https://github.com/mannau/h5")
+    (synopsis "Interface to the HDF5 Library")
+    (description
+     "This package provides an S4 interface to the HDF5 library supporting
+fast storage and retrieval of R-objects like vectors, matrices and arrays to
+binary files in a language independent format.  The HDF5 format can therefore
+be used as an alternative to R's save/load mechanism.  Since h5 is able to
+access only subsets of stored data it can also handle data sets which do not
+fit into memory.")
+    (license license:bsd-2)))
+
 (define-public r-cgdsr
   (package
     (name "r-cgdsr")