gnu: trilinos-for-dealii-openmpi: Fix build.

This fixes the error

  error: ‘std::hypot’ has not been declared

caused by using an older version of gcc, but requires some patches to
placate newer versions of gcc.

* gnu/packages/maths.scm (trilinos-for-dealii-openmpi)[origin]: Add
patches.
[native-inputs]: Remove gcc-7.
* gnu/packages/patches/teuchos-remove-duplicate-using.patch: New file.
* gnu/packages/patches/tpetra-remove-duplicate-using.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Register them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
This commit is contained in:
Paul A. Patience 2023-10-12 10:02:25 -04:00 committed by Ludovic Courtès
parent c942f4dcab
commit fed6ac2ae1
No known key found for this signature in database
GPG Key ID: 090B11993D9AEBB5
4 changed files with 58 additions and 4 deletions

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@ -2026,6 +2026,7 @@ dist_patch_DATA = \
%D%/packages/patches/texinfo-5-perl-compat.patch \
%D%/packages/patches/telegram-desktop-allow-disable-libtgvoip.patch \
%D%/packages/patches/telegram-purple-adjust-test.patch \
%D%/packages/patches/teuchos-remove-duplicate-using.patch \
%D%/packages/patches/texi2html-document-encoding.patch \
%D%/packages/patches/texi2html-i18n.patch \
%D%/packages/patches/thefuck-test-environ.patch \
@ -2036,6 +2037,7 @@ dist_patch_DATA = \
%D%/packages/patches/tla2tools-build-xml.patch \
%D%/packages/patches/tlf-support-hamlib-4.2+.patch \
%D%/packages/patches/tofi-32bit-compat.patch \
%D%/packages/patches/tpetra-remove-duplicate-using.patch \
%D%/packages/patches/transcode-ffmpeg.patch \
%D%/packages/patches/trytond-add-egg-modules-to-path.patch \
%D%/packages/patches/trytond-add-guix_trytond_path.patch \

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@ -6425,13 +6425,13 @@ revised simplex and the branch-and-bound methods.")
(string-replace-substring version "." "-")))))
(file-name (git-file-name "trilinos" version))
(sha256
(base32 "0fnwlhzsh85qj38cq3igbs8nm1b2jdgr2z734sapmyyzsy21mkgp"))))
(base32 "0fnwlhzsh85qj38cq3igbs8nm1b2jdgr2z734sapmyyzsy21mkgp"))
(patches
(search-patches "teuchos-remove-duplicate-using.patch"
"tpetra-remove-duplicate-using.patch"))))
(build-system cmake-build-system)
(native-inputs
(list
;; The build fails with the current gcc.
;; Use the version from when Trilinos was added.
gcc-7
gfortran
;; Trilinos's repository contains several C-shell scripts, but adding
;; tcsh to the native inputs does not result in the check phase running

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@ -0,0 +1,34 @@
commit e27d9ae98502626d8407045a4e082797682ba56b
Author: Christian Glusa <caglusa@sandia.gov>
Date: Fri Jul 3 18:02:27 2020 -0600
Teuchos Comm test: remove duplicate 'using ...'
diff --git a/packages/teuchos/comm/test/Comm/reduce.cpp b/packages/teuchos/comm/test/Comm/reduce.cpp
index c05ebc0dc34..eac1975ef83 100644
--- a/packages/teuchos/comm/test/Comm/reduce.cpp
+++ b/packages/teuchos/comm/test/Comm/reduce.cpp
@@ -53,9 +53,6 @@ bool
testReduceSum (bool& success, std::ostream& out,
const int root, const Teuchos::Comm<int>& comm)
{
-#ifdef HAVE_TEUCHOS_MPI
- using Teuchos::MpiComm;
-#endif // HAVE_TEUCHOS_MPI
using Teuchos::reduce;
using Teuchos::TypeNameTraits;
using std::endl;
diff --git a/packages/teuchos/comm/test/Comm/scatter.cpp b/packages/teuchos/comm/test/Comm/scatter.cpp
index 0ca961d2846..001009029c4 100644
--- a/packages/teuchos/comm/test/Comm/scatter.cpp
+++ b/packages/teuchos/comm/test/Comm/scatter.cpp
@@ -53,9 +53,6 @@ bool
testScatter (bool& success, std::ostream& out,
const int root, const Teuchos::Comm<int>& comm)
{
-#ifdef HAVE_TEUCHOS_MPI
- using Teuchos::MpiComm;
-#endif // HAVE_TEUCHOS_MPI
using Teuchos::scatter;
using Teuchos::TypeNameTraits;
using std::endl;

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@ -0,0 +1,18 @@
commit 919ceb0acbf4c6bc4f463433504a338c643612c2
Author: Karen D. Devine <kddevin@sandia.gov>
Date: Tue Feb 2 13:49:13 2021 -0700
tpetra: removed duplicate using statement #8673
diff --git a/packages/tpetra/core/src/Tpetra_Details_FixedHashTable_def.hpp b/packages/tpetra/core/src/Tpetra_Details_FixedHashTable_def.hpp
index a76f78c41a8..69d4dc46d03 100644
--- a/packages/tpetra/core/src/Tpetra_Details_FixedHashTable_def.hpp
+++ b/packages/tpetra/core/src/Tpetra_Details_FixedHashTable_def.hpp
@@ -1094,7 +1094,6 @@ init (const keys_type& keys,
// Allocate the array of (key,value) pairs. Don't fill it with
// zeros, because we will fill it with actual data below.
- using Kokkos::ViewAllocateWithoutInitializing;
typedef typename val_type::non_const_type nonconst_val_type;
nonconst_val_type val (ViewAllocateWithoutInitializing ("Tpetra::FixedHashTable::pairs"),
theNumKeys);