From fe3e05d8b3dbb255179d3f85aca870e6085bb71a Mon Sep 17 00:00:00 2001 From: Navid Afkhami Date: Sun, 23 Jul 2023 12:41:47 +0200 Subject: [PATCH] gnu: python-decoupler-py: Update to 1.5.0-1.459b235. * gnu/packages/bioinformatics.scm (python-decoupler-py): Update to 1.5.0-1.459b235. [arguments]: Disable two more tests. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioinformatics.scm | 10 +++++++--- 1 file changed, 7 insertions(+), 3 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 34e8565788..577a0a25b1 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1680,11 +1680,11 @@ (define-public python-cmseq (define-public python-decoupler-py ;; This latest commit fixes a bug in test_omnip.py. - (let ((commit "b84c524ec4a9280a56c0db963e2c7b010316ce8f") + (let ((commit "459b235348ddd9135217a3722d9dd1caa9a14ace") (revision "1")) (package (name "python-decoupler-py") - (version (git-version "1.3.1" revision commit)) + (version (git-version "1.5.0" revision commit)) (source (origin (method git-fetch) (uri (git-reference @@ -1693,7 +1693,7 @@ (define-public python-decoupler-py (file-name (git-file-name name version)) (sha256 (base32 - "0d74yr5jqc52vcxaca84kxqw7m5rbazpmvnrcp2y4xxrj6yr1sfc")))) + "1c0xk006iilyffdaqar2d05qdhik22fbkny387zx0bndkgqifxhl")))) (build-system pyproject-build-system) (arguments (list @@ -1704,6 +1704,10 @@ (define-public python-decoupler-py " and not test_show_resources" " and not test_get_dorothea" " and not test_get_progeny" + " and not test_get_ksn_omnipath" + ;; XXX module 'omnipath.interactions' has no + ;; attribute 'CollecTRI' + " and not test_get_collectri" ;; XXX This one fails because the "texts" list ;; is empty, so there are no texts to adjust. ;; It is not clear whether this a compatibility