gnu: r-grohmm: Move to (gnu packages bioconductor).

* gnu/packages/bioinformatics.scm (r-grohmm): Move from here...
* gnu/packages/bioconductor.scm (r-grohmm): ...to here.
This commit is contained in:
zimoun 2021-03-15 14:01:26 +01:00 committed by Ricardo Wurmus
parent 5ac55aea8b
commit d5576b6eb7
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GPG key ID: 197A5888235FACAC
2 changed files with 27 additions and 27 deletions

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@ -8567,6 +8567,33 @@ (define-public r-experimenthub
access.")
(license license:artistic2.0)))
(define-public r-grohmm
(package
(name "r-grohmm")
(version "1.24.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "groHMM" version))
(sha256
(base32
"08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx"))))
(properties `((upstream-name . "groHMM")))
(build-system r-build-system)
(propagated-inputs
`(("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-mass" ,r-mass)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://github.com/Kraus-Lab/groHMM")
(synopsis "GRO-seq analysis pipeline")
(description
"This package provides a pipeline for the analysis of GRO-seq data.")
(license license:gpl3+)))
(define-public r-multiassayexperiment
(package
(name "r-multiassayexperiment")

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@ -7387,33 +7387,6 @@ (define-public r-demultiplex
")
(license license:cc0))))
(define-public r-grohmm
(package
(name "r-grohmm")
(version "1.24.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "groHMM" version))
(sha256
(base32
"08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx"))))
(properties `((upstream-name . "groHMM")))
(build-system r-build-system)
(propagated-inputs
`(("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-mass" ,r-mass)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://github.com/Kraus-Lab/groHMM")
(synopsis "GRO-seq analysis pipeline")
(description
"This package provides a pipeline for the analysis of GRO-seq data.")
(license license:gpl3+)))
(define-public vsearch
(package
(name "vsearch")