gnu: r-grohmm: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-grohmm): Move from here... * gnu/packages/bioconductor.scm (r-grohmm): ...to here.
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@ -8567,6 +8567,33 @@ (define-public r-experimenthub
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access.")
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(license license:artistic2.0)))
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(define-public r-grohmm
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(package
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(name "r-grohmm")
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(version "1.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "groHMM" version))
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(sha256
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(base32
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"08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx"))))
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(properties `((upstream-name . "groHMM")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicalignments" ,r-genomicalignments)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-mass" ,r-mass)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://github.com/Kraus-Lab/groHMM")
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(synopsis "GRO-seq analysis pipeline")
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(description
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"This package provides a pipeline for the analysis of GRO-seq data.")
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(license license:gpl3+)))
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(define-public r-multiassayexperiment
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(package
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(name "r-multiassayexperiment")
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@ -7387,33 +7387,6 @@ (define-public r-demultiplex
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")
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(license license:cc0))))
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(define-public r-grohmm
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(package
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(name "r-grohmm")
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(version "1.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "groHMM" version))
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(sha256
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(base32
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"08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx"))))
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(properties `((upstream-name . "groHMM")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicalignments" ,r-genomicalignments)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-mass" ,r-mass)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://github.com/Kraus-Lab/groHMM")
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(synopsis "GRO-seq analysis pipeline")
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(description
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"This package provides a pipeline for the analysis of GRO-seq data.")
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(license license:gpl3+)))
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(define-public vsearch
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(package
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(name "vsearch")
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