gnu: Add r-interactivedisplay.
* gnu/packages/bioconductor.scm (r-interactivedisplay): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
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@ -51,6 +51,7 @@ (define-module (gnu packages bioconductor)
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#:use-module (gnu packages haskell-xyz)
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#:use-module (gnu packages image)
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#:use-module (gnu packages java)
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#:use-module (gnu packages javascript)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages netpbm)
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#:use-module (gnu packages python)
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@ -7734,6 +7735,90 @@ (define-public r-impute
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microarray data, using nearest neighbor averaging.")
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(license license:gpl2+)))
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(define-public r-interactivedisplay
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(package
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(name "r-interactivedisplay")
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(version "1.38.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "interactiveDisplay" version))
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(sha256
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(base32
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"1y9fdnpz1bagrwhyj8jikp2q5fd9y74j48l5z7f0s88v88sa7szl"))
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(snippet
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'(for-each delete-file
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'("inst/www/js/jquery.js"
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"inst/www/js/jquery.min.js"
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"inst/www/js/jquery.dataTables.min.js")))))
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(properties `((upstream-name . "interactiveDisplay")))
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(build-system r-build-system)
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(arguments
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(list
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#:modules '((guix build utils)
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(guix build r-build-system)
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(srfi srfi-1))
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#:phases
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'(modify-phases %standard-phases
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(add-after 'unpack 'process-javascript
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(lambda* (#:key inputs #:allow-other-keys)
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(call-with-values
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(lambda ()
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(unzip2
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`((,(assoc-ref inputs "js-jquery-1.8.2")
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"inst/www/js/jquery.js")
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(,(assoc-ref inputs "js-jquery-1.9.1")
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"inst/www/js/jquery.min.js")
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(,(search-input-file inputs
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"/share/javascript/jquery.dataTables.min.js")
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"inst/www/js/jquery.dataTables.min.js"))))
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(lambda (sources targets)
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(for-each (lambda (source target)
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(format #true "Processing ~a --> ~a~%"
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source target)
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(invoke "esbuild" source "--minify"
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(string-append "--outfile=" target)))
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sources targets))))))))
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(propagated-inputs
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(list r-annotationdbi
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r-biocgenerics
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r-biocmanager
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r-category
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r-dt
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r-ggplot2
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r-gridsvg
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r-interactivedisplaybase
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r-plyr
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r-rcolorbrewer
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r-reshape2
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r-shiny
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r-zlibbioc
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r-xml))
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(native-inputs
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`(("esbuild" ,esbuild)
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("r-knitr" ,r-knitr)
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("js-datatables" ,js-datatables)
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("js-jquery-1.8.2"
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,(origin
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(method url-fetch)
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(uri "https://code.jquery.com/jquery-1.8.2.js")
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(sha256
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(base32
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"0nikk2clbnyi02k0brvhbd8m43lfh4l1zrya35jya9sy6wb9b9ng"))))
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("js-jquery-1.9.1"
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,(origin
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(method url-fetch)
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(uri "https://code.jquery.com/jquery-1.9.1.js")
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(sha256
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(base32
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"0h4dk67yc9d0kadqxb6b33585f3x3559p6qmp70l00qwq030vn3v"))))))
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(home-page "https://bioconductor.org/packages/interactiveDisplay")
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(synopsis "Package for Shiny web displays of Bioconductor objects")
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(description
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"This package offers interactive Shiny displays for Bioconductor
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objects. In addition, this package empowers users to develop engaging
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visualizations and interfaces for working with Bioconductor data.")
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(license license:artistic2.0)))
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(define-public r-interactivedisplaybase
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(package
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(name "r-interactivedisplaybase")
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