From c705fcaaa5800f5dc781898fee5d017568a488cc Mon Sep 17 00:00:00 2001 From: zimoun Date: Thu, 17 Nov 2022 03:50:29 +0100 Subject: [PATCH] gnu: r-rgreat: Update to 2.0.1. * gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.1. [propagated-inputs]: Add r-annotationdbi, r-circlize, r-digest, r-doparallel, r-dt, r-foreach, r-genomeinfodb, r-genomicfeatures, r-globaloptions, r-go-db, r-org-hs-eg-db, r-progress, r-rcolorbrewer, r-rcpp, r-s4vectors, r-shiny, r-txdb-hsapiens-ucsc-hg19-knowngene, and r-txdb-hsapiens-ucsc-hg38-knowngene. --- gnu/packages/bioconductor.scm | 28 +++++++++++++++++++++++++--- 1 file changed, 25 insertions(+), 3 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index f4daeb867d..71a060be87 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -15362,18 +15362,40 @@ (define-public r-pcatools (define-public r-rgreat (package (name "r-rgreat") - (version "1.28.0") + (version "2.0.1") (source (origin (method url-fetch) (uri (bioconductor-uri "rGREAT" version)) (sha256 (base32 - "0px72r8mjimf5mxfwb9qz46kqpgjw5gaqq41hy0212ymjd8whaky")))) + "1s1xx15ilamcyd8f7cnsgdc3r3izhx9wxmb8amamrmr9bzijjvhi")))) (properties `((upstream-name . "rGREAT"))) (build-system r-build-system) (propagated-inputs - (list r-genomicranges r-getoptlong r-iranges r-rcurl r-rjson)) + (list r-annotationdbi + r-circlize + r-digest + r-doparallel + r-dt + r-foreach + r-genomeinfodb + r-genomicfeatures + r-genomicranges + r-getoptlong + r-globaloptions + r-go-db + r-iranges + r-org-hs-eg-db + r-progress + r-rcolorbrewer + r-rcurl + r-rcpp + r-rjson + r-s4vectors + r-shiny + r-txdb-hsapiens-ucsc-hg19-knowngene + r-txdb-hsapiens-ucsc-hg38-knowngene)) (native-inputs (list r-knitr)) (home-page "https://github.com/jokergoo/rGREAT") (synopsis "Client for GREAT analysis")