gnu: Add r-roar.
* gnu/packages/bioconductor.scm (r-roar): New variable.
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@ -3914,3 +3914,32 @@ (define-public r-yarn
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techniques to account for the large heterogeneity and sparsity found in very
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large RNA-seq experiments.")
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(license license:artistic2.0)))
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(define-public r-roar
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(package
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(name "r-roar")
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(version "1.18.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "roar" version))
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(sha256
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(base32
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"15650s9vs7dvmqpvrs4xwn6j4kh14yqsx4daqyhhxxr68kn8mklw"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicalignments" ,r-genomicalignments)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)
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("r-summarizedexperiment" ,r-summarizedexperiment)))
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(home-page "https://github.com/vodkatad/roar/")
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(synopsis "Identify differential APA usage from RNA-seq alignments")
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(description
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"This package provides tools for identifying preferential usage of APA
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sites, comparing two biological conditions, starting from known alternative
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sites and alignments obtained from standard RNA-seq experiments.")
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(license license:gpl3)))
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