gnu: Add r-sccustomize.

* gnu/packages/bioinformatics.scm (r-sccustomize): New variable.
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Ricardo Wurmus 2022-07-04 13:25:03 +02:00
parent 602cf66c79
commit a0125732ef
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@ -7167,6 +7167,64 @@ (define-public r-presto
auROC analysis.")
(license license:gpl3))))
(define-public r-sccustomize
(let ((commit "8414d1f5fb32277855b0619191a568932b7baeb0")
(revision "1"))
(package
(name "r-sccustomize")
(version (git-version "0.7.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/samuel-marsh/scCustomize")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1wcgfq7lx83a2kf8pjbw524gdvxf351n08cwd5wzmmy57kf4knbj"))))
(properties `((upstream-name . "scCustomize")))
(build-system r-build-system)
(propagated-inputs
(list r-circlize
r-colorway
r-cowplot
r-data-table
r-dittoseq
r-dplyr
r-forcats
r-ggbeeswarm
r-ggplot2
r-ggprism
r-ggpubr
r-ggrastr
r-ggrepel
r-glue
r-janitor
r-magrittr
r-matrix
r-paletteer
r-patchwork
r-pbapply
r-purrr
r-remotes
r-scales
r-scattermore
r-seurat
r-seuratobject
r-stringi
r-stringr
r-tibble
r-tidyr
r-tidyselect
r-viridis))
(native-inputs (list r-knitr))
(home-page "https://github.com/samuel-marsh/scCustomize")
(synopsis "Custom visualization and analyses of single-cell sequencing")
(description
"This is a collection of functions created and/or curated to aid in the
visualization and analysis of single-cell data using R.")
(license license:gpl3+))))
(define-public r-snapatac
(package
(name "r-snapatac")