gnu: Add r-adductomicsr.

* gnu/packages/bioconductor.scm (r-adductomicsr): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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Mădălin Ionel Patrașcu 2022-04-17 17:10:46 +02:00 committed by Ricardo Wurmus
parent 495bc9f962
commit 9c19db8c1d
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@ -1899,6 +1899,51 @@ (define-public r-agilp
;; GPLv3.
(license license:gpl3)))
(define-public r-adductomicsr
(package
(name "r-adductomicsr")
(version "1.10.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "adductomicsR" version))
(sha256
(base32
"0cnvxrk0h3r6jpa4g4qismg6zk5c7rf8lqixg89c24i98gffkbcl"))))
(properties `((upstream-name . "adductomicsR")))
(build-system r-build-system)
(propagated-inputs
(list r-adductdata
r-ade4
r-annotationhub
r-bootstrap
r-data-table
r-dosnow
r-dplyr
r-dt
r-experimenthub
r-fastcluster
r-foreach
r-fpc
r-mzr
r-orgmassspecr
r-pastecs
r-pracma
r-rcppeigen
r-reshape2
r-rvest
r-smoother
r-zoo))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/adductomicsR")
(synopsis "Processing of adductomic mass spectral datasets")
(description
"This package @code{adductomicsR} processes data generated by the
@dfn{second stage of mass spectrometry} (MS2) to identify potentially adducted
peptides from spectra that has been corrected for mass drift and retention
time drift and quantifies level mass spectral peaks from @dfn{first stage of
mass spectrometry} (MS1) data.")
(license license:artistic2.0)))
(define-public r-aneufinder
(package
(name "r-aneufinder")