gnu: Add r-abaenrichment.
* gnu/packages/bioconductor.scm (r-abaenrichment): New variable.
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@ -3430,3 +3430,33 @@ (define-public r-gofuncr
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genes into account. It is also possible to provide custom gene coordinates,
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annotations and ontologies.")
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(license license:gpl2+)))
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(define-public r-abaenrichment
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(package
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(name "r-abaenrichment")
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(version "1.12.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "ABAEnrichment" version))
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(sha256
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(base32
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"0bvanqmg1smyckh16m2qn7d68zq4j7n74sgsnbgms5jngbp9158v"))))
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(properties `((upstream-name . "ABAEnrichment")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-abadata" ,r-abadata)
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("r-data-table" ,r-data-table)
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("r-gofuncr" ,r-gofuncr)
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("r-gplots" ,r-gplots)
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("r-gtools" ,r-gtools)
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("r-rcpp" ,r-rcpp)))
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(home-page "https://bioconductor.org/packages/ABAEnrichment/")
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(synopsis "Gene expression enrichment in human brain regions")
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(description
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"The package ABAEnrichment is designed to test for enrichment of user
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defined candidate genes in the set of expressed genes in different human brain
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regions. The core function @code{aba_enrich} integrates the expression of the
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candidate gene set (averaged across donors) and the structural information of
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the brain using an ontology, both provided by the Allen Brain Atlas project.")
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(license license:gpl2+)))
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