gnu: Add python-peaks2utr.
* gnu/packages/bioinformatics.scm (python-peaks2utr): New variable.
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@ -1945,6 +1945,42 @@ (define-public python-logomaker
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multi-panel figures.")
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(license license:expat)))
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(define-public python-peaks2utr
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(package
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(name "python-peaks2utr")
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(version "1.2.0")
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(source (origin
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(method url-fetch)
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(uri (pypi-uri "peaks2utr" version))
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(sha256
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(base32
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"1idp9cgwqxvryf4qqrc1xjsamfqn3jmr56kmjp2h1ysmckwmhw4v"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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#:test-flags
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;; These two tests fail because file names are not URLs.
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'(list "-k" "not test_annotation.py")))
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(propagated-inputs
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(list python-asgiref
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python-gffutils
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python-importlib-resources
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macs
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python-numpy
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python-psutil
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python-pybedtools
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python-pysam
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python-requests
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python-tqdm
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python-typing-extensions
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python-zipp))
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(home-page "https://github.com/haessar/peaks2utr")
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(synopsis "Python CLI for annotating three prime UTR")
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(description
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"This package provides a robust, parallelized Python CLI for annotating
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three prime UTR.")
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(license license:gpl3+)))
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(define-public python-pegasusio
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(package
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(name "python-pegasusio")
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