gnu: Add r-tcgautils.

* gnu/packages/bioconductor.scm (r-tcgautils): New variable.
This commit is contained in:
Ricardo Wurmus 2023-07-19 15:15:09 +02:00
parent 3132fcf7f8
commit 91b1367e90
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@ -9440,6 +9440,44 @@ (define-public r-singscore
level.")
(license license:gpl3)))
(define-public r-tcgautils
(package
(name "r-tcgautils")
(version "1.20.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "TCGAutils" version))
(sha256
(base32
"0nnfrd5x3mii9adizvz79jinlxn2lhg4civ9v0wwygmdhk7rrm1n"))))
(properties `((upstream-name . "TCGAutils")))
(build-system r-build-system)
(propagated-inputs (list r-annotationdbi
r-biocgenerics
r-genomeinfodb
r-genomicdatacommons
r-genomicfeatures
r-genomicranges
r-iranges
r-multiassayexperiment
r-raggedexperiment
r-rvest
r-s4vectors
r-stringr
r-summarizedexperiment
r-xml2))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/TCGAutils")
(synopsis "TCGA utility functions for data management")
(description
"This package provides a suite of helper functions for checking and
manipulating TCGA data including data obtained from the @code{curatedTCGAData}
experiment package. These functions aim to simplify and make working with
TCGA data more manageable. Exported functions include those that import data
from flat files into Bioconductor objects, convert row annotations, and
identifier translation via the GDC API.")
(license license:artistic2.0)))
(define-public r-tkwidgets
(package
(name "r-tkwidgets")