gnu: Add r-timeseriesexperiment.

* gnu/packages/bioconductor.scm (r-timeseriesexperiment): New variable.
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Ricardo Wurmus 2019-09-15 20:42:41 +02:00
parent 739b2d10f0
commit 853211a51b
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@ -5505,3 +5505,42 @@ (define-public r-wavcluster
be applied to the analysis of other NGS data obtained from experimental
procedures that induce nucleotide substitutions (e.g. BisSeq).")
(license license:gpl2)))
(define-public r-timeseriesexperiment
(package
(name "r-timeseriesexperiment")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "TimeSeriesExperiment" version))
(sha256
(base32
"1j11g7a2p0yk38fx6wd6152l1xynghj01pfxihalw601jwf1bl0y"))))
(properties
`((upstream-name . "TimeSeriesExperiment")))
(build-system r-build-system)
(propagated-inputs
`(("r-deseq2" ,r-deseq2)
("r-dplyr" ,r-dplyr)
("r-dynamictreecut" ,r-dynamictreecut)
("r-edger" ,r-edger)
("r-ggplot2" ,r-ggplot2)
("r-hmisc" ,r-hmisc)
("r-limma" ,r-limma)
("r-magrittr" ,r-magrittr)
("r-proxy" ,r-proxy)
("r-s4vectors" ,r-s4vectors)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-tibble" ,r-tibble)
("r-tidyr" ,r-tidyr)
("r-vegan" ,r-vegan)
("r-viridis" ,r-viridis)))
(home-page "https://github.com/nlhuong/TimeSeriesExperiment/")
(synopsis "Analysis for short time-series data")
(description
"This package is a visualization and analysis toolbox for short time
course data which includes dimensionality reduction, clustering, two-sample
differential expression testing and gene ranking techniques. The package also
provides methods for retrieving enriched pathways.")
(license license:lgpl3+)))