gnu: Add r-biovizbase.

* gnu/packages/bioinformatics.scm (r-biovizbase): New variable.
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Ricardo Wurmus 2017-11-07 15:33:50 +01:00
parent 2f6f61fd8e
commit 7af1f40373
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@ -9675,6 +9675,47 @@ (define-public r-organismdbi
the fact that each of these packages implements a select methods.")
(license license:artistic2.0)))
(define-public r-biovizbase
(package
(name "r-biovizbase")
(version "1.26.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "biovizBase" version))
(sha256
(base32
"14l4vhj0a4ssr9m9zdzz3qpd4qw1mhgq5bmxq7jhrq3j9kmd6i2f"))))
(properties `((upstream-name . "biovizBase")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-annotationfilter" ,r-annotationfilter)
("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-dichromat" ,r-dichromat)
("r-ensembldb" ,r-ensembldb)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
("r-hmisc" ,r-hmisc)
("r-iranges" ,r-iranges)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors)
("r-scales" ,r-scales)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-variantannotation" ,r-variantannotation)))
(home-page "https://bioconductor.org/packages/biovizBase")
(synopsis "Basic graphic utilities for visualization of genomic data")
(description
"The biovizBase package is designed to provide a set of utilities, color
schemes and conventions for genomic data. It serves as the base for various
high-level packages for biological data visualization. This saves development
effort and encourages consistency.")
(license license:artistic2.0)))
(define-public r-qvalue
(package
(name "r-qvalue")