gnu: Add r-atsnp.

* gnu/packages/bioconductor.scm (r-atsnp): New variable.
This commit is contained in:
Mădălin Ionel Patrașcu 2022-06-23 12:46:31 +02:00 committed by Ricardo Wurmus
parent 599655dc49
commit 70d30096b3
No known key found for this signature in database
GPG key ID: 197A5888235FACAC

View file

@ -2317,6 +2317,39 @@ (define-public r-antiprofiles
tumor samples from healthy controls.")
(license license:artistic2.0)))
(define-public r-atsnp
(package
(name "r-atsnp")
(version "1.12.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "atSNP" version))
(sha256
(base32
"0dmv34xqwr3l2rznapxmyrkyf1w78qzxdv88s5nn8s1m8qdkgwkz"))))
(properties `((upstream-name . "atSNP")))
(build-system r-build-system)
(propagated-inputs
(list r-biocfilecache
r-biocparallel
r-bsgenome
r-data-table
r-ggplot2
r-lifecycle
r-motifstack
r-rappdirs
r-rcpp
r-testthat))
(native-inputs (list r-knitr))
(home-page "https://github.com/sunyoungshin/atSNP")
(synopsis
"Affinity test for identifying regulatory single nucleotide polymorphisms")
(description
"The atSNP package performs affinity tests of motif matches with the
@dfn{SNP} (single nucleotide polymorphism) or the reference genomes and
SNP-led changes in motif matches.")
(license license:gpl2)))
(define-public r-attract
(package
(name "r-attract")