gnu: Add r-alphabeta.

* gnu/packages/bioconductor.scm (r-alphabeta): New variable.
This commit is contained in:
Mădălin Ionel Patrașcu 2022-06-16 18:35:02 +02:00 committed by Ricardo Wurmus
parent c706a0a2af
commit 6c7f0849c1
No known key found for this signature in database
GPG key ID: 197A5888235FACAC

View file

@ -2301,6 +2301,45 @@ (define-public r-aldex2
;; package's LICENSE is specified as GPL-3.
(license (list license:agpl3+ license:gpl2+ license:gpl3))))
(define-public r-alphabeta
(package
(name "r-alphabeta")
(version "1.10.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "AlphaBeta" version))
(sha256
(base32
"1ikdrigma02gnl6ggrc89bjsiqmd7knpb9kw7nqyrdnv3qjd9iag"))))
(properties `((upstream-name . "AlphaBeta")))
(build-system r-build-system)
(propagated-inputs
(list r-biocparallel
r-data-table
r-dplyr
r-expm
r-ggplot2
r-gtools
r-igraph
r-optimx
r-plotly
r-stringr))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/AlphaBeta")
(synopsis "Estimate epimutation rates and spectra from DNA methylations in plants")
(description
"The package @code{AlphaBeta} is a computational method for estimating
epimutation rates and spectra from high-throughput DNA methylation data in
plants. The method has been specifically designed to:
@itemize
@item analyze @emph{germline} epimutations in the context of
multi-generational mutation accumulation lines;
@item analyze @emph{somatic} epimutations in the context of plant development
and aging.
@end itemize")
(license license:gpl3)))
(define-public r-alpine
(package
(name "r-alpine")