gnu: Add r-opencyto.

* gnu/packages/bioconductor.scm (r-opencyto): New variable.
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Ricardo Wurmus 2019-12-15 14:25:45 +01:00
parent b700b9ec21
commit 6aedc80514
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@ -5585,6 +5585,48 @@ (define-public r-flowstats
package.")
(license license:artistic2.0)))
(define-public r-opencyto
(package
(name "r-opencyto")
(version "1.24.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "openCyto" version))
(sha256
(base32
"0h25nhvq1zq624wsgb55wjcgri9rcd2fnqkb31h9jdakr01dw2sb"))))
(properties `((upstream-name . "openCyto")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-clue" ,r-clue)
("r-data-table" ,r-data-table)
("r-flowclust" ,r-flowclust)
("r-flowcore" ,r-flowcore)
("r-flowstats" ,r-flowstats)
("r-flowviz" ,r-flowviz)
("r-flowworkspace" ,r-flowworkspace)
("r-graph" ,r-graph)
("r-gtools" ,r-gtools)
("r-ks" ,r-ks)
("r-lattice" ,r-lattice)
("r-mass" ,r-mass)
("r-ncdfflow" ,r-ncdfflow)
("r-plyr" ,r-plyr)
("r-r-utils" ,r-r-utils)
("r-rbgl" ,r-rbgl)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rcpp" ,r-rcpp)
("r-rrcov" ,r-rrcov)))
(home-page "https://bioconductor.org/packages/openCyto")
(synopsis "Hierarchical gating pipeline for flow cytometry data")
(description
"This package is designed to facilitate the automated gating methods in a
sequential way to mimic the manual gating strategy.")
(license license:artistic2.0)))
(define-public r-flowsom
(package
(name "r-flowsom")