gnu: conda: Update to 4.10.3.

* gnu/packages/package-management.scm (conda): Update to 4.10.3.
[arguments]: Add phase fix-ruamel-yaml-dependency; disable three more tests;
remove sudo workaround in "init" phase.
[native-inputs]: Add python-pytest-timeout.
This commit is contained in:
Ricardo Wurmus 2021-07-05 15:04:16 +02:00
parent e057e93069
commit 685cfdec94
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@ -836,7 +836,7 @@ (define-public python-conda-package-handling
(define-public conda
(package
(name "conda")
(version "4.8.3")
(version "4.10.3")
(source
(origin
(method git-fetch)
@ -846,7 +846,7 @@ (define-public conda
(file-name (git-file-name name version))
(sha256
(base32
"0iv1qzk21jsk6vdp3106xvpvl68zgfdqb3kyzpya87jhkl204l7r"))))
"1w4yy62bsvkybjvcm5fspck4ns5j16nplzpbx6bxv7zhx69pcp4n"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -856,8 +856,11 @@ (define-public conda
;; This file is no longer writable after downloading with
;; 'git-fetch'
(make-file-writable
"tests/conda_env/support/saved-env/environment.yml")
#t))
"tests/conda_env/support/saved-env/environment.yml")))
(add-after 'unpack 'fix-ruamel-yaml-dependency
(lambda _
(substitute* "setup.py"
(("ruamel_yaml_conda") "ruamel.yaml"))))
(add-after 'unpack 'correct-python-executable-name
(lambda* (#:key inputs #:allow-other-keys)
(let ((python (assoc-ref inputs "python-wrapper")))
@ -915,6 +918,14 @@ (define-public conda
;; This fails because we patched the default root
;; prefix.
" and not test_default_target_is_root_prefix"
;; These fail because ...
;; TODO: conda patches its own shebang to
;; $conda-prefix/bin/python, which is obviously wrong.
" and not test_run_returns_int"
" and not test_run_returns_zero_errorlevel"
" and not test_run_returns_nonzero_errorlevel"
;; TODO: I don't understand what this failure means
" and not test_PrefixData_return_value_contract"
;; TODO: same here
@ -930,16 +941,6 @@ (define-public conda
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(setenv "HOME" "/tmp")
;; "conda init" insists on using sudo, because it is hell-bent on
;; modifying system files.
(mkdir-p "/tmp/fake-sudo")
(with-output-to-file "/tmp/fake-sudo/sudo"
(lambda () (format #t "#!~/bin/sh~%exec $@" (which "sh"))))
(chmod "/tmp/fake-sudo/sudo" #o700)
(setenv "PATH" (string-append "/tmp/fake-sudo:"
(getenv "PATH")))
(invoke (string-append (assoc-ref outputs "out")
"/bin/conda")
"init"))))))
@ -958,6 +959,8 @@ (define-public conda
("python-tqdm" ,python-tqdm)
;; XXX: This is dragged in by libarchive and is needed at runtime.
("zstd" ,zstd)))
(native-inputs
`(("python-pytest-timeout" ,python-pytest-timeout)))
(home-page "https://github.com/conda/conda")
(synopsis "Cross-platform, OS-agnostic, system-level binary package manager")
(description