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gnu: r-snpstats: Move to (gnu packages bioconductor).

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* gnu/packages/bioinformatics.scm (r-snpstats): Move from here...
* gnu/packages/bioconductor.scm (r-snpstats): ...to here.
This commit is contained in:
zimoun 2020-12-23 19:06:33 +01:00 committed by Ricardo Wurmus
parent a2c66d18a5
commit 61ec8928c7
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GPG key ID: 197A5888235FACAC
2 changed files with 27 additions and 27 deletions
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27
gnu/packages/bioconductor.scm
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@ -9540,6 +9540,33 @@ (define-public r-pathview
large-scale and fully automated analysis.")
(license license:gpl3+)))
(define-public r-snpstats
(package
(name "r-snpstats")
(version "1.40.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "snpStats" version))
(sha256
(base32
"1298a71swwav53yf9kfqkdpach3818plqcbw0lgb6sibs8y8ff24"))))
(properties `((upstream-name . "snpStats")))
(build-system r-build-system)
(inputs `(("zlib" ,zlib)))
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-matrix" ,r-matrix)
("r-survival" ,r-survival)
("r-zlibbioc" ,r-zlibbioc)))
(home-page "https://bioconductor.org/packages/snpStats")
(synopsis "Methods for SNP association studies")
(description
"This package provides classes and statistical methods for large
@dfn{single-nucleotide polymorphism} (SNP) association studies. This extends
the earlier snpMatrix package, allowing for uncertainty in genotypes.")
(license license:gpl3)))
(define-public r-sushi
(package
(name "r-sushi")

27
gnu/packages/bioinformatics.scm
View file

@ -10596,33 +10596,6 @@ (define-public r-gqtlbase
and more.")
(license license:artistic2.0)))
(define-public r-snpstats
(package
(name "r-snpstats")
(version "1.40.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "snpStats" version))
(sha256
(base32
"1298a71swwav53yf9kfqkdpach3818plqcbw0lgb6sibs8y8ff24"))))
(properties `((upstream-name . "snpStats")))
(build-system r-build-system)
(inputs `(("zlib" ,zlib)))
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-matrix" ,r-matrix)
("r-survival" ,r-survival)
("r-zlibbioc" ,r-zlibbioc)))
(home-page "https://bioconductor.org/packages/snpStats")
(synopsis "Methods for SNP association studies")
(description
"This package provides classes and statistical methods for large
@dfn{single-nucleotide polymorphism} (SNP) association studies. This extends
the earlier snpMatrix package, allowing for uncertainty in genotypes.")
(license license:gpl3)))
(define-public r-dropbead
(let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
(revision "2"))