gnu: python-matplotlib: Update to 3.1.1.
* gnu/packages/python-xyz.scm (python-matplotlib): Update to 3.1.1. [native-inputs]: Remove python-nose; add python-pytest and unzip; add jquery-ui. [arguments]: Add build phases "fix-and-disable-failing-tests" and "install-jquery-ui", and move the "check" phase after the "install" phase; use the default backend in setup.cfg. (python2-matplotlib): Keep at version 2.2.3. (python-matplotlib-documentation)[arguments]: Remove "check" phase.
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@ -3806,14 +3806,14 @@ (define-public python2-colorspacious
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(define-public python-matplotlib
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(define-public python-matplotlib
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(package
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(package
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(name "python-matplotlib")
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(name "python-matplotlib")
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(version "2.2.3")
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(version "3.1.1")
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(source
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(source
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(origin
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(origin
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(method url-fetch)
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(method url-fetch)
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(uri (pypi-uri "matplotlib" version))
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(uri (pypi-uri "matplotlib" version))
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(sha256
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(sha256
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(base32
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(base32
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"1rcc7x9ig3hpchkc4cwdvym3y451w74275fxr455zkfagrsvymbk"))))
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"14qc109dibp32xfd9lah54djc0rc76fhbsj9cwyb328lzqmd5sqz"))))
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(build-system python-build-system)
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(build-system python-build-system)
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(propagated-inputs ; the following packages are all needed at run time
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(propagated-inputs ; the following packages are all needed at run time
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`(("python-cycler" ,python-cycler)
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`(("python-cycler" ,python-cycler)
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@ -3830,7 +3830,7 @@ (define-public python-matplotlib
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;; From version 1.4.0 'matplotlib' makes use of 'cairocffi' instead of
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;; From version 1.4.0 'matplotlib' makes use of 'cairocffi' instead of
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;; 'pycairo'. However, 'pygobject' makes use of a 'pycairo' 'context'
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;; 'pycairo'. However, 'pygobject' makes use of a 'pycairo' 'context'
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;; object. For this reason we need to import both libraries.
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;; object. For this reason we need to import both libraries.
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;; https://pythonhosted.org/cairocffi/cffi_api.html#converting-pycairo
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;; https://cairocffi.readthedocs.io/en/stable/cffi_api.html#converting-pycairo-wrappers-to-cairocffi
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("python-pycairo" ,python-pycairo)
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("python-pycairo" ,python-pycairo)
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("python-cairocffi" ,python-cairocffi)))
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("python-cairocffi" ,python-cairocffi)))
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(inputs
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(inputs
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@ -3845,11 +3845,59 @@ (define-public python-matplotlib
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("tk" ,tk)))
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("tk" ,tk)))
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(native-inputs
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(native-inputs
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`(("pkg-config" ,pkg-config)
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`(("pkg-config" ,pkg-config)
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("python-nose" ,python-nose)
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("python-pytest" ,python-pytest)
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("python-mock" ,python-mock)))
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("python-mock" ,python-mock)
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("unzip" ,unzip)
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("jquery-ui"
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,(origin
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(method url-fetch)
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(uri "https://jqueryui.com/resources/download/jquery-ui-1.12.1.zip")
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(sha256
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(base32
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"0kb21xf38diqgxcdi1z3s9ssq36pldvyqxy56hn6pcva6rs3c8zq"))))))
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(arguments
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(arguments
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`(#:phases
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`(#:phases
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(modify-phases %standard-phases
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(modify-phases %standard-phases
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;; XXX We disable all image comparison tests because we're using a
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;; newer version of FreeType than matplotlib expects. This leads to
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;; minor differences throughout the tests.
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(add-after 'unpack 'fix-and-disable-failing-tests
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(lambda _
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(substitute* (append (find-files "lib/matplotlib/tests/"
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"test_.*\\.py$")
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(find-files "lib/mpl_toolkits/tests"
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"test_.*\\.py$"))
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(("^from matplotlib" match)
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(string-append "import pytest\n" match))
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(("( *)@image_comparison" match indent)
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(string-append indent
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"@pytest.mark.skip(reason=\"unknown minor image differences\")\n"
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match)))
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(substitute* "lib/matplotlib/tests/test_animation.py"
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(("/bin/sh") (which "sh")))
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(for-each delete-file
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;; test_normal_axes, test_get_tightbbox_polar
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'("lib/matplotlib/tests/test_axes.py"
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;; test_outward_ticks
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"lib/matplotlib/tests/test_tightlayout.py"
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;; Fontconfig returns no fonts.
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"lib/matplotlib/tests/test_font_manager.py"))
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#t))
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(add-before 'install 'install-jquery-ui
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(lambda* (#:key outputs inputs #:allow-other-keys)
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(let ((dir (string-append (assoc-ref outputs "out")
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"/lib/python3.7/site-packages/matplotlib/backends/web_backend/")))
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(mkdir-p dir)
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(invoke "unzip"
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(assoc-ref inputs "jquery-ui")
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"-d" dir))
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#t))
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(delete 'check)
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(add-after 'install 'check
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(lambda* (#:key outputs inputs #:allow-other-keys)
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(add-installed-pythonpath inputs outputs)
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(invoke "python" "tests.py" "-v"
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"-m" "not network")))
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(add-before 'build 'configure-environment
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(add-before 'build 'configure-environment
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(lambda* (#:key outputs inputs #:allow-other-keys)
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(lambda* (#:key outputs inputs #:allow-other-keys)
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(let ((cairo (assoc-ref inputs "cairo")))
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(let ((cairo (assoc-ref inputs "cairo")))
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@ -3861,8 +3909,8 @@ (define-public python-matplotlib
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(lambda (port)
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(lambda (port)
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(format port "[directories]~%
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(format port "[directories]~%
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basedirlist = ~a,~a~%
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basedirlist = ~a,~a~%
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[rc_options]~%
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[packages]~%
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backend = TkAgg~%"
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tests = True~%"
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(assoc-ref inputs "tcl")
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(assoc-ref inputs "tcl")
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(assoc-ref inputs "tk")))))
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(assoc-ref inputs "tk")))))
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#t)))))
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#t)))))
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@ -3881,6 +3929,14 @@ (define-public python2-matplotlib
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(let ((matplotlib (package-with-python2
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(let ((matplotlib (package-with-python2
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(strip-python2-variant python-matplotlib))))
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(strip-python2-variant python-matplotlib))))
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(package (inherit matplotlib)
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(package (inherit matplotlib)
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(version "2.2.3")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "matplotlib" version))
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(sha256
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(base32
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"1rcc7x9ig3hpchkc4cwdvym3y451w74275fxr455zkfagrsvymbk"))))
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;; Make sure to use special packages for Python 2 instead
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;; Make sure to use special packages for Python 2 instead
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;; of those automatically rewritten by package-with-python2.
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;; of those automatically rewritten by package-with-python2.
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(propagated-inputs
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(propagated-inputs
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@ -3930,6 +3986,9 @@ (define-public python-matplotlib-documentation
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`(#:tests? #f ; we're only generating documentation
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`(#:tests? #f ; we're only generating documentation
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#:phases
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#:phases
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(modify-phases %standard-phases
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(modify-phases %standard-phases
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;; The tests in python-matplotlib are run after the install phase, so
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;; we need to delete the extra phase here.
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(delete 'check)
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(replace 'build
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(replace 'build
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(lambda _
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(lambda _
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(chdir "doc")
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(chdir "doc")
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