gnu: Add r-qtl2.

* gnu/packages/bioinformatics.scm (r-qtl2): New variable.
This commit is contained in:
Efraim Flashner 2019-12-04 10:57:15 +02:00
parent db6982e4e2
commit 5a4aab2193
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@ -8239,6 +8239,35 @@ (define-public r-qtl
two-dimensional genome scans.")
(license license:gpl3)))
(define-public r-qtl2
(package
(name "r-qtl2")
(version "0.20")
(source (origin
(method git-fetch)
;; Not yet available in cran.
(uri (git-reference
(url "https://github.com/rqtl/qtl2.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0l1asr28q25jzbwrbg5490962sg3y4sjrd0qf09p78ws1aq8vfs0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
("r-jsonlite" ,r-jsonlite)
("r-rcpp" ,r-rcpp)
("r-rcppeigen" ,r-rcppeigen)
("r-rsqlite" ,r-rsqlite)
("r-yaml" ,r-yaml)))
(home-page "https://kbroman.org/qtl2/")
(synopsis
"QTL analysis software for high-dimensional data and complex cross designs")
(description
"R/qtl2 (aka qtl2) is a reimplementation of the QTL analysis software
R/qtl, to better handle high-dimensional data and complex cross designs.")
(license license:gpl3)))
(define-public r-zlibbioc
(package
(name "r-zlibbioc")