gnu: Add r-refgenome.
* gnu/packages/cran.scm (r-refgenome): New variable.
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@ -4694,3 +4694,31 @@ (define-public r-doby
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@item miscellaneous other utilities.
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@end itemize\n")
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(license license:gpl2+)))
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(define-public r-refgenome
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(package
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(name "r-refgenome")
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(version "1.7.3")
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(source
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(origin
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(method url-fetch)
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(uri (cran-uri "refGenome" version))
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(sha256
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(base32
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"15p0ra2p1pwhy5ixbhsz1g79c5sc2aap4i4c8kil0m2syg9y45sn"))))
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(properties `((upstream-name . "refGenome")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-dbi" ,r-dbi)
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("r-doby" ,r-doby)
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("r-rsqlite" ,r-rsqlite)))
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(home-page "https://cran.r-project.org/web/packages/refGenome/")
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(synopsis
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"Gene and splice site annotation using annotation data from Ensembl and UCSC")
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(description
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"This package contains functionality for importing and managing of
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downloaded genome annotation data from the Ensembl genome browser (European
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Bioinformatics Institute) and from the UCSC genome browser (University of
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California, Santa Cruz) and annotation routines for genomic positions and
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splice site positions.")
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(license license:gpl2)))
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