gnu: Add python-bwapy.

* gnu/packages/bioinformatics.scm (python-bwapy): New variable.
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Ricardo Wurmus 2021-10-21 11:47:19 +00:00
parent 6526c35df5
commit 57841a91f5
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@ -106,6 +106,7 @@ (define-module (gnu packages bioinformatics)
#:use-module (gnu packages java-compression)
#:use-module (gnu packages jemalloc)
#:use-module (gnu packages jupyter)
#:use-module (gnu packages libffi)
#:use-module (gnu packages linux)
#:use-module (gnu packages logging)
#:use-module (gnu packages lsof)
@ -15112,6 +15113,31 @@ (define-public python-pyspoa
sequences")
(license license:expat)))
(define-public python-bwapy
(package
(name "python-bwapy")
(version "0.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bwapy" version))
(sha256
(base32 "090qwx3vl729zn3a7sksbviyg04kc71gpbm3nd8dalqp673x1npw"))))
(build-system python-build-system)
(propagated-inputs
`(("python-cffi" ,python-cffi)
("python-setuptools" ,python-setuptools)
("python-wheel" ,python-wheel)))
(inputs
`(("zlib" ,zlib)))
(home-page "https://github.com/ACEnglish/bwapy")
(synopsis "Python bindings to bwa alinger")
(description "This package provides Python bindings to the bwa mem
aligner.")
;; These Python bindings are licensed under Mozilla Public License 2.0,
;; bwa itself is licenced under GNU General Public License v3.0.
(license license:mpl2.0)))
(define-public scregseg
(package
(name "scregseg")